clone | 5'-sequence | 3'-sequence | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
JMSF007F05 | Sequence | 406 | 002280 (3) | ref|XP_009588653.1| | 5e-29 | PREDICTED: probable inactive purple acid phosphatase 27 isoform X1 [Nicotiana t | 744 | 011339 (3) | ref|XP_009588654.1| | 3e-112 | PREDICTED: nucleotide pyrophosphatase/phosphodiesterase-like isoform X2 [Nicoti |
JMSF027J13 | Sequence | 670 | 002280 (3) | ref|XP_009588653.1| | 2e-71 | PREDICTED: probable inactive purple acid phosphatase 27 isoform X1 [Nicotiana t | 782 | 011339 (3) | ref|XP_009588654.1| | 2e-119 | PREDICTED: nucleotide pyrophosphatase/phosphodiesterase-like isoform X2 [Nicoti |
JMSF031D23 | Sequence | 635 | 002280 (3) | ref|XP_009777408.1| | 6e-64 | PREDICTED: probable inactive purple acid phosphatase 27 isoform X1 [Nicotiana s | 584 | 011339 (3) | ref|XP_004242806.1| | 2e-70 | PREDICTED: probable inactive purple acid phosphatase 27 [Solanum lycopersicum] |
This contig is upended
. : . : . : . : . : . :
JMSF027J13+ CCAAGAGCAA
____________________________________________________________
consensus CCAAGAGCAA
. : . : . : . : . : . :
JMSF031D23+ ATTCACAAATGACAAGAAATTTGATACTGATATCA
JMSF027J13+ GGCGTGGCCAAAGAGGAGCTTTGGGATTCACAAATGACAAGAAATTTGATACTGATATCA
____________________________________________________________
consensus GGCGTGGCCAAAGAGGAGCTTTGGGATTCACAAATGACAAGAAATTTGATACTGATATCA
. : . : . : . : . : . :
JMSF031D23+ ATTTGGGATTCTCTAAACCACCAGAAAAGAGTGCGAAGGAGAAATCCGCCCGTTGATTGA
JMSF027J13+ ATTTGGGATTCTCTAAACCACCAGAAAAGAGTGCGAAGGAGAAATCCGCCCGTTGATTGA
____________________________________________________________
consensus ATTTGGGATTCTCTAAACCACCAGAAAAGAGTGCGAAGGAGAAATCCGCCCGTTGATTGA
. : . : . : . : . : . :
JMSF031D23+ TTAGTTGAAATTTGAGTGTAGTTTTTCCTGTCTCAATGTAATTATCATTGGAATAATTTG
JMSF027J13+ TTAGTTGAAATTTGAGTGTAGTTTTTCCTGTCTCAATGTAATTATCATTGGAATAATTTG
____________________________________________________________
consensus TTAGTTGAAATTTGAGTGTAGTTTTTCCTGTCTCAATGTAATTATCATTGGAATAATTTG
. : . : . : . : . : . :
JMSF031D23+ CAAACTTGTACTTTATGGGAGCGGTACAAATGAATGGGGTCCGGTAACCCTTTTCTTCCA
JMSF007F05+ TTTCTTCCA
JMSF027J13+ CAAACTTGTACTTTATGGGAGCGGTACAAATGAATGGGGTCCGGTAACCCTTTTCTTCCA
____________________________________________________________
consensus CAAACTTGTACTTTATGGGAGCGGTACAAATGAATGGGGTCCGGTAACCCTTTTCTTCCA
. : . : . : . : . : . :
JMSF031D23+ TAGCATCTTCCGGATAACAAATAGACTCATTGAATTTGGCAGGAGAAAATACTGCAACCC
JMSF007F05+ TAGCATCTTCCGGATAACAAATAGACTCATTGAATTTGGCAGGAGAAAATACTGCAACCC
JMSF027J13+ TAGCATCTTCCGGATAACAAATAGACTCATTGAATTTGGCAGGAGAAAATACTGCAACCC
____________________________________________________________
consensus TAGCATCTTCCGGATAACAAATAGACTCATTGAATTTGGCAGGAGAAAATACTGCAACCC
. : . : . : . : . : . :
JMSF031D23+ AGTCATCGTTGGAGGGTTGTGAATTCTGAAGATTCACAGCCACCCATTCTGTATCTTCTC
JMSF007F05+ AGTCATCGTTGGAGGGTTGTGAATTCTGAAGATTCACAGCCACCCATTCTGTATCTTCTC
JMSF027J13+ AGTCATCGTTGGAGGGTTGTGAATTCTGAAGATTCACAGCCACCCATTCTGTATCTTCTC
____________________________________________________________
consensus AGTCATCGTTGGAGGGTTGTGAATTCTGAAGATTCACAGCCACCCATTCTGTATCTTCTC
. : . : . : . : . : . :
JMSF031D23+ CCTTGAGGCCAAGAAGATCGGGTTTGGCTTGAATGGAGGCTGAATCTCGGAGAGCCAAGA
JMSF007F05+ CCTTGAGGCCAAGAAGATCGGGTTTGGCTTGAATGGAGGCTGAATCTCGGAGAGCCAAGA
JMSF027J13+ CCTTGAGGCCAAGAAGATCGGGTTTGGCTTGAATGGAGGCTGAATCTCGGAGAGCCAAGA
____________________________________________________________
consensus CCTTGAGGCCAAGAAGATCGGGTTTGGCTTGAATGGAGGCTGAATCTCGGAGAGCCAAGA
. : . : . : . : . : . :
JMSF031D23+ CAGCCTTGTGAATGGCGATCTTAGACAAAGGCTGCTCCCCTAAGATATGCCCATTTTCCC
JMSF007F05+ CAGCCTTGTGAATGGCGATCTTAGACAAAGGCTGCTCCCCTAAGATATGCCCATTTTCCC
JMSF027J13+ CAGCCTTGTGAATGGCGATCTTAGACAAAGGCTGCTCCCCTAAGATATGCCCATTTTCCC
____________________________________________________________
consensus CAGCCTTGTGAATGGCGATCTTAGACAAAGGCTGCTCCCCTAAGATATGCCCATTTTCCC
. : . : . : . : . : . :
JMSF031D23+ CCACTGAAATATGGCTATGGAGGGCTGAACCAAAACCTATGAAACACCACAAGAAGAAGA
JMSF007F05+ CCACTGAAATATGGCTATGGAGGGCTGAACCAAAACCTATGAAACACCACAAGAAGAAGA
JMSF027J13+ CCACTGAAATATGGCTATGGAGGGCTGAACCAAAACCTATGAAACACCACAAGAAGAAGA
____________________________________________________________
consensus CCACTGAAATATGGCTATGGAGGGCTGAACCAAAACCTATGAAACACCACAAGAAGAAGA
. : . : . : . : . : . :
JMSF031D23+ AGAAGAAGAAGAGTTTCTTCATAATTTTTTTATTTCACTCCTCACATACACGCATCAGAT
JMSF007F05+ AGAAGAAGAAGAGTTTCTTCATAATTTTTTTATTTCACTCCTCACATACACGCATCAGAT
JMSF027J13+ AGAAGAAGAAGAGTTTCTTCATAATTTTTTTATTTCACTCCTCACATACACGCATCAGAT
____________________________________________________________
consensus AGAAGAAGAAGAGTTTCTTCATAATTTTTTTATTTCACTCCTCACATACACGCATCAGAT
. : . : . : . : . : . :
JMSF031D23+ GCCTAGTAGTCAAATAAGAGAGTAGAAGGGAGATGTGCATCTTGGTTTGATATTTTGG
JMSF007F05+ GCCTAGTAGTCAAATAAGAGAGTAGAAGGGAGATGT
JMSF027J13+ GCCTAGTAGTCAAATAAGAGAGTAGAAGGGAGATGTGCATCTTGGTTTGATATTTTGGCC
____________________________________________________________
consensus GCCTAGTAGTCAAATAAGAGAGTAGAAGGGAGATGTGCATCTTGGTTTGATATTTTGGCC