| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF005K10 | Sequence | 519 | 002265 (4) | ref|XP_009789870.1| | 6e-05 | PREDICTED: protein IQ-DOMAIN 1-like [Nicotiana sylvestris] | |||||
| JMFF035B18 | Sequence | 585 | 002265 (4) | ref|XP_009789870.1| | 4e-05 | PREDICTED: protein IQ-DOMAIN 1-like [Nicotiana sylvestris] | 664 | 009841 (6) | ref|XP_004246683.1| | 5e-39 | PREDICTED: protein IQ-DOMAIN 1 [Solanum lycopersicum] ref|XP_010326010.1| PREDIC |
| JMFF049B19 | Sequence | 624 | 002265 (4) | ref|XP_011004180.1| | 1e-07 | PREDICTED: protein IQ-DOMAIN 1-like [Populus euphratica] | 612 | 009841 (6) | ref|XP_004246683.1| | 2e-39 | PREDICTED: protein IQ-DOMAIN 1 [Solanum lycopersicum] ref|XP_010326010.1| PREDIC |
| JMSF026F18 | Sequence | 680 | 002265 (4) | ref|XP_011004180.1| | 3e-11 | PREDICTED: protein IQ-DOMAIN 1-like [Populus euphratica] | 741 | 009841 (6) | ref|XP_004246683.1| | 9e-57 | PREDICTED: protein IQ-DOMAIN 1 [Solanum lycopersicum] ref|XP_010326010.1| PREDIC |
This contig is upended
. : . : . : . : . : . :
JMSF026F18+ GTCTCACAAGTCCTCTCGAAC
____________________________________________________________
consensus GTCTCACAAGTCCTCTCGAAC
. : . : . : . : . : . :
JMFF049B19+ CGAAACGCAGTCTGGATTCTGATTGCTGCAGC
JMSF026F18+ CTTAAAAGCTGTTCTAGTCTGGTACCCACGAAACGCAGTCTGGATTCTGATTGCTGCAGC
____________________________________________________________
consensus CTTAAAAGCTGTTCTAGTCTGGTACCCACGAAACGCAGTCTGGATTCTGATTGCTGCAGC
. : . : . : . : . : . :
JMFF049B19+ TTCTTCCTTGGACTTGCCTGAAAACTTGNCGGGTGCAGTTGATTGAACAACAACCTTT-G
JMFF035B18+ TGGACTTGCCTGAAAACTTNGCGGGTGCAGTTGATTGAACAACAACCTTTGG
JMFF005K10+ TGGACTTGCCTGAAAACTTTGCGGGTGCAGTTGATTGAACAACAACCTTT-G
JMSF026F18+ TTCTTCCTTGGACTTGCCTGAAAACTTTGCGGGTGCAGTTGATTGAACAACAACCTTT-G
____________________________________________________________
consensus TTCTTCCTTGGACTTGCCTGAAAACTTTGCGGGTGCAGTTGATTGAACAACAACCTTT-G
. : . : . : . : . : . :
JMFF049B19+ CAGCAGCCTCGTCTTCTTCCTTGGATTTGCCCGAAAGCTTTGCAACTGCAGCTGATTGAA
JMFF035B18+ CAGCAGCCTCGTCTTCTTCCTTGGATTTGCCCGAAAGCTTTGCAACTGCAGCTGATTGAA
JMFF005K10+ CAGCAGCCTCGTCTTCTTCCTTGGATTTGCCCGAAAGCTTTGCAACTGCAGCTGATTGAA
JMSF026F18+ CAGCAGCCTCGTCTTCTTCCTTGGATTTGCCCGAAAGCTTTGCAACTGCAGCTGATTGAA
____________________________________________________________
consensus CAGCAGCCTCGTCTTCTTCCTTGGATTTGCCCGAAAGCTTTGCAACTGCAGCTGATTGAA
. : . : . : . : . : . :
JMFF049B19+ CAGCTTCTGCAATAGCATCTTCAGCCACTGCAGCTGTGGCAACTTCTTTCTCGACTTCTG
JMFF035B18+ CAGCTTCTGCAATAGCATCTTCAGCCACTGCAGCTGTGGCAACTTCTTTCTCGACTTCTG
JMFF005K10+ CAGCTTCTGCAATAGCATCTTCAGCCACTGCAGCTGTGGCAACTTCTTTCTCGACTTCTG
JMSF026F18+ CAGCTTCTGCAATAGCATCTTCAGCCACTGCAGCTGTGGCAACTTCTTTCTCGACTTCTG
____________________________________________________________
consensus CAGCTTCTGCAATAGCATCTTCAGCCACTGCAGCTGTGGCAACTTCTTTCTCGACTTCTG
. : . : . : . : . : . :
JMFF049B19+ CCAATTTTACCTCTTCCAGATGAGGAGGTGAGGCAGCAGTGGAAGTCTCGAGAGTTGCAG
JMFF035B18+ CCAATTTTACCTCTTCCAGATGAGGAGGTGAGGCAGCAGTGGAAGTCTCGAGAGTTGCAG
JMFF005K10+ CCAATTTTACCTCTTCCAGATGAGGAGGTGAGGCAGCAGTGGAAGTCTCGAGAGTTGCAG
JMSF026F18+ CCAATTTTACCTCTTCCAGATGAGGAGGTGAGGCAGCAGTGGAAGTCTCGAGAGTTGCAG
____________________________________________________________
consensus CCAATTTTACCTCTTCCAGATGAGGAGGTGAGGCAGCAGTGGAAGTCTCGAGAGTTGCAG
. : . : . : . : . : . :
JMFF049B19+ AATTCGGAACGTGAAGCTTCTCCTTTCCCAACAATCTGTTCTTCGATTTATTTGCTTTCT
JMFF035B18+ AATTCGGAACGTGAAGCTTCTCCTTTCCCAACAATCTGTTCTTCGATTTATTTGCTTTCT
JMFF005K10+ AATTCGGAACGTGAAGCTTCTCCTTTCCCAACAATCTGTTCTTCGATTTATTTGCTTTCT
JMSF026F18+ AATTCGGAACGTGAAGCTTCTCCTTTCCCAACAATCTGTTCTTCGATTTATTTGCTTTCT
____________________________________________________________
consensus AATTCGGAACGTGAAGCTTCTCCTTTCCCAACAATCTGTTCTTCGATTTATTTGCTTTCT
. : . : . : . : . : . :
JMFF049B19+ GTTCCTTCTTTTCCTTAGATTCTGGGCTGAATGCCTTCTTCACTGAAGAAAACCAGCTCC
JMFF035B18+ GTTCCTTCTTTTCCTTAGATTCTGGGCTGAATGCCTTCTTCACTGAAGAAAACCAGCTCC
JMFF005K10+ GTTCCTTCTTTTCCTTAGATTCTGGGCTGAATGCCTTCTTCACTGAAGAAAACCAGCTCC
JMSF026F18+ GTTCCTTCTTTTCCTTAGATTCTGGGCTGAATGCCTTCTTCACTGAAGAAAACCAGCTCC
____________________________________________________________
consensus GTTCCTTCTTTTCCTTAGATTCTGGGCTGAATGCCTTCTTCACTGAAGAAAACCAGCTCC
. : . : . : . : . : . :
JMFF049B19+ CCTTCCTCCCCATTCTTTTATAAGTCTGTGAATGAGAGTTCCCAGATCTCAGAAAGCTTC
JMFF035B18+ CCTTCCTCCCCATTCTTTTATAAGTCTGTGAATGAGAGTTCCCAGATCTCAGAAAGCTTC
JMFF005K10+ CCTTCCTCCCCATTCTTTTATAAGTCTGTGAATGAGAGTTCCCAGATCTCAGAAAGCTTC
JMSF026F18+ CCTTCCTCCCCATTCTTTTATAAGTCTGTGAATGAGAGTTCCCAGATCTCAGAAAGCTTC
____________________________________________________________
consensus CCTTCCTCCCCATTCTTTTATAAGTCTGTGAATGAGAGTTCCCAGATCTCAGAAAGCTTC
. : . : . : . : . : . :
JMFF049B19+ CATTGTTGTTCTATATATACAGAGTTTCTTTTCTGTGAAACAAAAAGACTAGAAAGAGAG
JMFF035B18+ CATTGTTGTTCTATATATACAGAGTTTCTTTTCTGTGAAACAAAAAGACTAGAAAGAGAG
JMFF005K10+ CATTGTTGTTCTATATATACAGAGTTTCTTTTCTGTGAAACAAAAAGACTAGAAAGAGAG
JMSF026F18+ CATTGTTGTTCTATATATACAGAGTTTCTTTTCTGTGAAACAAAAAGACTAGAAAGAGAG
____________________________________________________________
consensus CATTGTTGTTCTATATATACAGAGTTTCTTTTCTGTGAAACAAAAAGACTAGAAAGAGAG
. : . : . : . : . : . :
JMFF049B19+ ATTGTGCCCTCCTCCCTGAATATCCATTGGTAGTGAAAGAGAAAGAGAAAGATCAGATCT
JMFF035B18+ ATTGTGCCCTCCTCCCTGAATATCCATTGGTAGTGAAAGAGAAAGAGAAAGATCAGATCT
JMFF005K10+ ATTGTGCCCTCCTCCCTGAATATCCATTGGTAGTGAAAGAGAAAGAG
JMSF026F18+ ATTGTGCCCTCCTCCCTGAATATCCATTGGTAGTGAAAGAGAAAGAGAAAGATCAGATCT
____________________________________________________________
consensus ATTGTGCCCTCCTCCCTGAATATCCATTGGTAGTGAAAGAGAAAGAGAAAGATCAGATCT
. : . : . : . : . : . :
JMFF049B19+ TTCCAAAGAGAAGTTCAACTACTGTGTCTGTAGAACGTGAAGAATACCAACT
JMFF035B18+ TTCCAAAGAGAAGTTCAACTACTGTGTCTGTAGAACGTGAAGAATACCAACT
JMSF026F18+ TTCCAAAGAGAAGTTCAACTACTGTGTCTGTAGAACGTGAAGAATACCAACTGGCCTCAA
____________________________________________________________
consensus TTCCAAAGAGAAGTTCAACTACTGTGTCTGTAGAACGTGAAGAATACCAACTGGCCTCAA