| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF021O04 | Sequence | 543 | 002259 (4) | ref|XP_006338440.1| | 3e-55 | PREDICTED: KH domain-containing protein At4g18375-like isoform X4 [Solanum tube | 651 | 009774 (3) | ref|XP_006338439.1| | 6e-07 | PREDICTED: KH domain-containing protein At4g18375-like isoform X3 [Solanum tube |
| JMFF042K21 | Sequence | 638 | 002259 (4) | ref|XP_011098647.1| | 1e-70 | PREDICTED: KH domain-containing protein At4g18375 [Sesamum indicum] ref|XP_01109 | 289 | 009774 (3) | |||
| JMSF025M13 | Sequence | 642 | 002259 (4) | ref|XP_011098647.1| | 6e-61 | PREDICTED: KH domain-containing protein At4g18375 [Sesamum indicum] ref|XP_01109 | 736 | 009774 (3) | ref|XP_006338439.1| | 2e-38 | PREDICTED: KH domain-containing protein At4g18375-like isoform X3 [Solanum tube |
| JMSF036J22 | Sequence | 655 | 002259 (4) | ref|XP_011098647.1| | 3e-61 | PREDICTED: KH domain-containing protein At4g18375 [Sesamum indicum] ref|XP_01109 | 613 | 021536 | |||
This contig is upended
. : . : . : . : . : . :
JMFF042K21+ CTGATCCGAGGGTACCAACAGCCTAGCAGTCACACG
____________________________________________________________
consensus CTGATCCGAGGGTACCAACAGCCTAGCAGTCACACG
. : . : . : . : . : . :
JMFF042K21+ CGGAGCATCCTCAGAGTCCTCAATTACCATGTCATCACCAACAATTCTGTCATGGACCTT
JMSF036J22+ GCATCCTCAGAGTCCTCAATTACCATGTCATCACCAACAATTCTGTCATGGACCTT
JMSF025M13+ CTCAATTACCATGTCATCACCAACAATTCTGTCATGGACCTT
____________________________________________________________
consensus CGGAGCATCCTCAGAGTCCTCAATTACCATGTCATCACCAACAATTCTGTCATGGACCTT
. : . : . : . : . : . :
JMFF042K21+ GAAGAGGGCATCTTGTGCTGGACACACTTGATCTTCAGTGTCCTCAAAATCATTTGTTTC
JMSF036J22+ GAAGAGGGCATCTTGTGCTGGACACACTTGATCTTCAGTGTCCTCAAAATCATTTGTTTC
JMFF021O04+ GAAGAGGGCATCTTGTGCTGGACACACTTGATCTTCAGTGTCCTCAAAATCATTTGTTTC
JMSF025M13+ GAAGAGGGCATCTTGTGCTGGACACACTTGATCTTCAGTGTCCTCAAAATCATTTGTTTC
____________________________________________________________
consensus GAAGAGGGCATCTTGTGCTGGACACACTTGATCTTCAGTGTCCTCAAAATCATTTGTTTC
. : . : . : . : . : . :
JMFF042K21+ CTCGCTTGAGCTGTAGATAGTGACAACCCGCTCATCACAATCACGAACCGTCTCACCAAT
JMSF036J22+ CTCGCTTGAGCTGTAGATAGTGACAACCCACTCATCACAATCACGAACCGTCTCACCAAT
JMFF021O04+ CTCGCTTGAGCTGTAGATAGTGACAACCCGCTCATCACAATCACGAACCGTCTCACCAAT
JMSF025M13+ CTCGCTTGAGCTGTAGATAGTGACAACCCGCTCATCACAATCACGAACCGTCTCACCAAT
____________________________________________________________
consensus CTCGCTTGAGCTGTAGATAGTGACAACCCGCTCATCACAATCACGAACCGTCTCACCAAT
. : . : . : . : . : . :
JMFF042K21+ CCTGATCTTCGATTTAGTCTCTGCCCTTAATTGCTTCACTATCTCCCCTCCCCTTCCAAG
JMSF036J22+ CCTGATCTTCGATTTAGTCTCTGCCCTTAATTGCTTCACTATCTCCCCTCCCCTTCCAAG
JMFF021O04+ CCTGATCTTCGATTTAGTCTCTGCCCTTAATTGCTTCACTATCTCCCCTCCCCTTCCAAG
JMSF025M13+ CCTGATCTTCGATTTAGTCTCTGCCCTTAATTGCTTCACTATCTCCCCTCCCCTTCCAAG
____________________________________________________________
consensus CCTGATCTTCGATTTAGTCTCTGCCCTTAATTGCTTCACTATCTCCCCTCCCCTTCCAAG
. : . : . : . : . : . :
JMFF042K21+ TATACTTCCTATCTTTTTTCCAGGACACAAGTACCGATACACCGTATCCTCAGGTTCAAT
JMSF036J22+ TATACTTCCTATCTTTTTTCCAGGACACAAGTACCGATACACCGTATCCTCAGGTTCAAT
JMFF021O04+ TATACTTCCTATCTTTTTTCCAGGACACAAGTACCGATACACCGTATCCTCAGGTTCAAT
JMSF025M13+ TATACTTCCTATCTTTTTTCCAGGACACAAGTACCGATACACCGTATCCTCAGGTTCAAT
____________________________________________________________
consensus TATACTTCCTATCTTTTTTCCAGGACACAAGTACCGATACACCGTATCCTCAGGTTCAAT
. : . : . : . : . : . :
JMFF042K21+ TGACAAATGGTCCTTACCACCACCAGAATTCCTTCTTTTATTTGCTCCATTATCAGCATA
JMSF036J22+ TGACAAATGGTCCTTACCATCACCAGAATTCCTTCTTTTATTTGCTCCATTATCAGCATA
JMFF021O04+ TGACAAATGGTCCTTACCACCACCAGAATTCCTTCTTTTATTTGCTCCATTATCAGCATA
JMSF025M13+ TGACAAATGGTCCTTACCACCACCAGAATTCCTTCTTTTATTTGCTCCATTATCAGCATA
____________________________________________________________
consensus TGACAAATGGTCCTTACCACCACCAGAATTCCTTCTTTTATTTGCTCCATTATCAGCATA
. : . : . : . : . : . :
JMFF042K21+ TTCAGACTGAGAATAAGAACGTTTCCCATGACTACTCCTTTGACCAGCCATACCGGTTGC
JMSF036J22+ TTCAGACTGAGAATAAGAACGTTTCCCATGACTACTCCTTTGACCAGCCATACCGGTTGC
JMFF021O04+ TTCAGACTGAGAATAAGAACGTTTCCCATGACTACTCCTTTGACCAGCCATACCGGTTGC
JMSF025M13+ TTCAGACTGAGAATAAGAACGTTTCCCATGACTACTCCTTTGACCAGCCATACCGGTTGC
____________________________________________________________
consensus TTCAGACTGAGAATAAGAACGTTTCCCATGACTACTCCTTTGACCAGCCATACCGGTTGC
. : . : . : . : . : . :
JMFF042K21+ AGCTAAGTTAGGATCTGGGAGAGTGCTAGAGATTGCGAAAATCTTGACAAGCAGCAAAAG
JMSF036J22+ AGCTAAGTTAGGATCTGGGAGAGTGCTAGAGATTGCGAAAATCTTGACAAGCAGCAAAAG
JMFF021O04+ AGCTAAGTTAGGATCTGGGAGAGTGCTAGAGATTGCGAAAATCTTGACAAGCAGCAAAAG
JMSF025M13+ AGCTAAGTTAGGATCTGGGAGAGTGCTAGAGATTGCGAAAATCTTGACAAGCAGCAAAAG
____________________________________________________________
consensus AGCTAAGTTAGGATCTGGGAGAGTGCTAGAGATTGCGAAAATCTTGACAAGCAGCAAAAG
. : . : . : . : . : . :
JMFF042K21+ AAGACGAAAATGGCGAAATTCTGAAGGGGAACCAAGAATTTTGCTAGTCGATTTAAACCT
JMSF036J22+ AAGACGAAAATGGCGAAATTCTGAAGGGGAACCAAGAATTTTGCTAGTCGATTTAAACCT
JMFF021O04+ AAGACGAAAATGGCGAAATTCTGAAGGGGAACCAAGAATTTTGCTAGTCGATTTAAACCT
JMSF025M13+ AAGACGAAAATGGCGAAATTCTGAAGGGGAACCAAGAATTTTGCTAGTCGATTTAAACCT
____________________________________________________________
consensus AAGACGAAAATGGCGAAATTCTGAAGGGGAACCAAGAATTTTGCTAGTCGATTTAAACCT
. : . : . : . : . : . :
JMFF042K21+ GGATTTCTAACAGACTTATCTTCTTCTAGCGAGCTGAATGGAGCATGGAGAGGCTTACCG
JMSF036J22+ GGATTTCTAACAGACTTATCTTCTTCTAGCGAGCTGAATGGAGCATGGAGAGGCTTACCG
JMFF021O04+ GGATTTCTAACAGACTTATCTTCTTCTAGCGAGCTGAATGGAGCATGGAGAGGCTTACCG
JMSF025M13+ GGATTTCTAACAGACTTATCTTCTTCTAGCGAGCTGAATGGAGCATGGAGAGGCTTACCG
____________________________________________________________
consensus GGATTTCTAACAGACTTATCTTCTTCTAGCGAGCTGAATGGAGCATGGAGAGGCTTACCG
. : . : . : . : . : . :
JMSF036J22+ TGCGCGACCCGTACGACGACTTGACGATGATGTATGAGTTTGACCGGCCAAATC
JMSF025M13+ TGCGCGACCCGTACGACGACTTGACGATGATGTATGAGTTTGACCGGCCAAATCTTCTTC
____________________________________________________________
consensus TGCGCGACCCGTACGACGACTTGACGATGATGTATGAGTTTGACCGGCCAAATCTTCTTC