Contig 002211:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF001A21Sequence601002211 (4)ref|XP_006339420.1|261PREDICTED: uncharacterized protein LOC102603324 [Solanum tuberosum]662005384 (4)ref|XP_009609631.1|109PREDICTED: uncharacterized protein LOC104103435 [Nicotiana tomentosiformis]
JMFF016F07Sequence605002211 (4)ref|XP_009614536.1|359PREDICTED: uncharacterized protein LOC104107438 [Nicotiana tomentosiformis]653005384 (4)ref|XP_009609631.1|109PREDICTED: uncharacterized protein LOC104103435 [Nicotiana tomentosiformis]
JMSF020M02Sequence669002211 (4)ref|XP_006339420.1|283PREDICTED: uncharacterized protein LOC102603324 [Solanum tuberosum]747005384 (4)ref|XP_009609631.1|132PREDICTED: uncharacterized protein LOC104103435 [Nicotiana tomentosiformis]
JMSF021C20Sequence673002211 (4)ref|XP_006339420.1|283PREDICTED: uncharacterized protein LOC102603324 [Solanum tuberosum]806005384 (4)ref|XP_009609631.1|164PREDICTED: uncharacterized protein LOC104103435 [Nicotiana tomentosiformis]

Alignment

This contig is upended


. : . : . : . : . : . :
JMFF016F07+ GTAAGTGTCAACAAGTTCCATC
                      ____________________________________________________________
consensus GTAAGTGTCAACAAGTTCCATC
 
. : . : . : . : . : . :
JMFF016F07+ ATCAAATCAACCAAATCAGAGAAAGGGCTGTCCAAAACCATTCCGGCAATAGAAGGATAC
                      ____________________________________________________________
consensus ATCAAATCAACCAAATCAGAGAAAGGGCTGTCCAAAACCATTCCGGCAATAGAAGGATAC
 
. : . : . : . : . : . :
JMFF016F07+ TCAGCTCCATACATCAGACTTGTAACAGCACCCATTGATCTACCCCACAAGCCAATTAAA
JMSF020M02+ CAAGCCAATTAAA
JMSF021C20+ CAAGCCAATTAAA
                      ____________________________________________________________
consensus TCAGCTCCATACATCAGACTTGTAACAGCACCCATTGATCTACCCCACAAGCCAATTAAA
 
. : . : . : . : . : . :
JMFF016F07+ GAAACATTTCCATCTTGCCGTAAATACTCAACAACAGCTTTAAGATCATCTTTTTCATTC
JMSF020M02+ GAAACATTTCCATCTTGCCGTAAATACTCAACAACAGCTTTAAGATCATCTTTTTCATTC
JMFF001A21+ ATACTCAACAACAGCTTTAAGATCATCTTTTTCATTC
JMSF021C20+ GAAACATTTCCATCTTGCCGTAAATACTCAACAACAGCTTTAAGATCATCTTTTTCATTC
                      ____________________________________________________________
consensus GAAACATTTCCATCTTGCCGTAAATACTCAACAACAGCTTTAAGATCATCTTTTTCATTC
 
. : . : . : . : . : . :
JMFF016F07+ CATCCCAAAGTAACATGCTCTCCCCCAGACAGTCCAGATCCAGAAAAGTCAAGGGTGAAT
JMSF020M02+ CATCCCAAAGTAACATGCTCTCCCCCAGACAGTCCAGATCCAGAAAAGTCAAGGGTGAAT
JMFF001A21+ CATCCCAAAGTAACATGCTCTCCCCCAGACAGTCCAGATCCAGAAAAGTCAAGGGTGAAT
JMSF021C20+ CATCCCAAAGTAACATGCTCTCCCCCAGACAGTCCAGATCCAGAAAAGTCAAGGGTGAAT
                      ____________________________________________________________
consensus CATCCCAAAGTAACATGCTCTCCCCCAGACAGTCCAGATCCAGAAAAGTCAAGGGTGAAT
 
. : . : . : . : . : . :
JMFF016F07+ ACAGTAATATTTGATGGCAATAATATAATGGCAGCTTCGCTGGCATCTGCTCGACAGCCA
JMSF020M02+ ACAGTAATATTTGATGGCAATAATATAATGGCAGCTTCGCTGGCATCTGCTCGACAGCCA
JMFF001A21+ ACAGTAATATTTGATGGCAATAATATAATGGCAGCTTCGCTGGCATCTGCTCGACAGCCA
JMSF021C20+ ACAGTAATATTTGATGGCAATAATATAATGGCAGCTTCGCTGGCATCTGCTCGACAGCCA
                      ____________________________________________________________
consensus ACAGTAATATTTGATGGCAATAATATAATGGCAGCTTCGCTGGCATCTGCTCGACAGCCA
 
. : . : . : . : . : . :
JMFF016F07+ CTGTTTCCATGACAGTAGATTACACAGGGCAGAGGCTTTCCTTCAGGACAAATGATAGGT
JMSF020M02+ CTGTTTCCATGACAGTAGATTACACAGGGCAGAGGCTTTCCTTCAGGACAAATGATAGGT
JMFF001A21+ CTGTTTCCATGACAGTAGATTACACAGGGCAGAGGCTTTCCTTCAGGACAAATGATAGGT
JMSF021C20+ CTGTTTCCATGACAGTAGATTACACAGGGCAGAGGCTTTCCTTCAGGACAAATGATAGGT
                      ____________________________________________________________
consensus CTGTTTCCATGACAGTAGATTACACAGGGCAGAGGCTTTCCTTCAGGACAAATGATAGGT
 
. : . : . : . : . : . :
JMFF016F07+ ATGTAATGGCTACATTTAAGAGCATCACCCCGACTGTTTTTAACCTCCAAATCCTTCCGT
JMSF020M02+ ATGTAATGGCTACATTTAAGAGCATCACCCCGACTGTTTTTAACCTCCAAATCCTTCCGT
JMFF001A21+ ATGTAATGGCTACATTTAAGAGCATCACCCCGACTGTTTTTAACCTCCAAATCCTTCCGT
JMSF021C20+ ATGTAATGGCTACATTTAAGAGCATCACCCCGACTGTTTTTAACCTCCAAATCCTTCCGT
                      ____________________________________________________________
consensus ATGTAATGGCTACATTTAAGAGCATCACCCCGACTGTTTTTAACCTCCAAATCCTTCCGT
 
. : . : . : . : . : . :
JMFF016F07+ TGGTACCACTTCCCTTTGAGCATGAATTCTTCATCTAGTAAATCATTCTTTGGGTCATAT
JMSF020M02+ TGGTACCACTTCCCTTTGAGCATGAATTCTTCATCTAGTAAATCATTCTTTGGGTCATAT
JMFF001A21+ TGGTACCACTTCCCTTTGAGCATGAATTCTTCATCTAGTAAATCATTCTTTGGGTCATAT
JMSF021C20+ TGGTACCACTTCCCTTTGAGCATGAATTCTTCATCTAGTAAATCATTCTTTGGGTCATAT
                      ____________________________________________________________
consensus TGGTACCACTTCCCTTTGAGCATGAATTCTTCATCTAGTAAATCATTCTTTGGGTCATAT
 
. : . : . : . : . : . :
JMFF016F07+ TCAGCTCTGGGTGGTCTTATAATGAAGTTGACAAGCTGTTCCATACAGATTCAATGGCCA
JMSF020M02+ TCAGCTCTGGGTGGTCTTATAATGAAGTTGACAAGCTGTTCCATACAGATTCAATGGCCA
JMFF001A21+ TCAGCTCTGGGTGGTCTTATAATGAAGTTGACAAGCTGTTCCATACAGATTCAATGGCCA
JMSF021C20+ TCAGCTCTGGGTGGTCTTATAATGAAGTTGACAAGCTGTTCCATACAGATTCAATGGCCA
                      ____________________________________________________________
consensus TCAGCTCTGGGTGGTCTTATAATGAAGTTGACAAGCTGTTCCATACAGATTCAATGGCCA
 
. : . : . : . : . : . :
JMFF016F07+ ATCGATCTTCTCTCTCTAAATATAAATGTATAGAGAAATACAC
JMSF020M02+ ATCGATCTTCTCTCTCTAAATATAAATGTATAGAGAAATACACTGGTTACATGTATGTAT
JMFF001A21+ ATCGATCTTCTCTCTCTAAATATAAATGTATAGAGAAATACACTGGTTACATGTATGTAT
JMSF021C20+ ATCGATCTTCTCTCTCTAAATATAAATGTATAGAGAAATACACTGGTTACATGTATGTAT
                      ____________________________________________________________
consensus ATCGATCTTCTCTCTCTAAATATAAATGTATAGAGAAATACACTGGTTACATGTATGTAT
 
. : . : . : . : . : . :
JMSF020M02+ TTACATTATATATAAGATAGATAGATATATATATAATTTATATGCATGGGTTAAGGTGGG
JMFF001A21+ TTACATTATATATAAGATAGATAGATATATATATAATTTATATGCATGGGTTAAGGTGGG
JMSF021C20+ TTACATTATATATAAGATAGATAGATATATATATAATTTATATGCATGGGTTAAGGTGGG
                      ____________________________________________________________
consensus TTACATTATATATAAGATAGATAGATATATATATAATTTATATGCATGGGTTAAGGTGGG
 
. : . : . : . : . : . :
JMSF020M02+ TAGAGAGAGAAAGAGGAATAAAAAGGGGAGGGAGCACTGTGGTAAGAGTTATGGGTTTGC
JMFF001A21+ TAGAGAGAGAAAGAGGAATAAAAAGGGGAGGGAGCACTGTGGTAAGAGTTATGGGTTTGC
JMSF021C20+ TAGAGAGAGAAAGAGGAATAAAAAGGGGAGGGAGCACTGTGGTAAGAGTTATGGGTTTGC
                      ____________________________________________________________
consensus TAGAGAGAGAAAGAGGAATAAAAAGGGGAGGGAGCACTGTGGTAAGAGTTATGGGTTTGC
 
. : . : . : . : . : . :
JMSF020M02+ TTTCAGAGGAGAAGGTCAGAAGAGGAAGAAACGAAGCGCTTTTGTTTGGCTTCTC
JMFF001A21+ TTTCAGAGGAGAAGGTCAGAAGAG
JMSF021C20+ TTTCAGAGGAGAAGGTCAGAAGAGGAAGAAACGAAGCGCTTTTGTTTGGCTTCTCTTCCA
                      ____________________________________________________________
consensus TTTCAGAGGAGAAGGTCAGAAGAGGAAGAAACGAAGCGCTTTTGTTTGGCTTCTCTTCCA