Contig 002207:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS007H08+                                                              GCTGTCGCC
                      ____________________________________________________________
consensus                                                                GCTGTCGCC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS007H08+           TTTCCCCCTGAATTTGAGCATCCATCTAAATAGGCAATAGAGATATATATAGATCTGAGA
                      ____________________________________________________________
consensus             TTTCCCCCTGAATTTGAGCATCCATCTAAATAGGCAATAGAGATATATATAGATCTGAGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS007H08+           GCTAAGCTGAATAATCTTTTCAAAAATGAAAAGCCAAGAGTGCCACAAAACAGCCATTAA
JMFF024G23+                                  AAATGAAAAGCCAAGAGTGCCACAAAACAGCCATTAA
                      ____________________________________________________________
consensus             GCTAAGCTGAATAATCTTTTCAAAAATGAAAAGCCAAGAGTGCCACAAAACAGCCATTAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS007H08+           AACATGCCTCATGACAACCTAACATTGTTAATCAATTGGCAATTAATCAATTGAAGTAAA
JMFF024G23+           AACATGCCTCATGACAACCTAACATTGTTAATCAATTGGCAATTAATCAATTGAAGTAAA
                      ____________________________________________________________
consensus             AACATGCCTCATGACAACCTAACATTGTTAATCAATTGGCAATTAATCAATTGAAGTAAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS007H08+           TCAATTGGCAGTTAATCAATTGAATTGAAGTAAATCAATTGGCAGTTAATCAGATGAGAT
JMFF024G23+           TCAATTGGCAGTTAATCAATTGAATTGAAGTAAATCAATTGGCAGTTAATCAGATGAGAT
                      ____________________________________________________________
consensus             TCAATTGGCAGTTAATCAATTGAATTGAAGTAAATCAATTGGCAGTTAATCAGATGAGAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS007H08+           CATCTGGTTAATCAATTGGCGTGACCAGATGATAAGCAATCAATCACATAAAAATATAAA
JMFF024G23+           CATCTGGTTAATCAATTGGCGTGACCAGATGATAAGCAATCAATCACATAAAAATATAAA
                      ____________________________________________________________
consensus             CATCTGGTTAATCAATTGGCGTGACCAGATGATAAGCAATCAATCACATAAAAATATAAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS007H08+           GCAACGAAAATGATAAATTTCAAAATATTTACGAAATATGTTAATATTTCATACAGTTGC
JMFF024G23+           GCAACGAAAATGATAAATTTCAAAATATTTACGAAATATGTTAATATTTCATACAGTTGC
rJMSF021A09-                                                                 GTTGC
JMSF021A09+                     TGATAAATTTCAAAATATTTACGAAATATGTTAATATTTCATACAGTTGC
                      ____________________________________________________________
consensus             GCAACGAAAATGATAAATTTCAAAATATTTACGAAATATGTTAATATTTCATACAGTTGC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS007H08+           ATCAACCAGAAAAGTAAGAGACAAAAACAAGTAAAGGATAGAGGAGACTACCCATTAATA
JMFF024G23+           ATCAACCAGAAAAGTAAGAGACAAAAACAAGTAAAGGATAGAGGAGACTACCCATTAATA
rJMSF021A09-          ATCAACCAGAAAAGTAAGAGACAAAAACAAGTAAAGGATAGAGGAGACTACCCATTAATA
JMSF021A09+           ATCAACCAGAAAAGTAAGAGACAAAAACAAGTAAAGGATAGAGGAGACTACCCATTAATA
                      ____________________________________________________________
consensus             ATCAACCAGAAAAGTAAGAGACAAAAACAAGTAAAGGATAGAGGAGACTACCCATTAATA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS007H08+           CATCTACATGGATGCCTTTTCCACCGCCGCAACAAGACACCAACGCCGGAGGCAACACCA
JMFF024G23+           CATCTACATGGATGCCTTTTCCACCGCCGCAACAAGACACCAACGCCGGAGGCAACACCA
rJMSF021A09-          CATCTACATGGATGCCTTTTCCACCGCCGCAACAAGACACCAACGCCGGAGGCAACACCA
JMSF021A09+           CATCTACATGGATGCCTTTTCCACCGCCGCAACAAGACACCAACGCCGGAGGCAACACCA
                      ____________________________________________________________
consensus             CATCTACATGGATGCCTTTTCCACCGCCGCAACAAGACACCAACGCCGGAGGCAACACCA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS007H08+           CACCGCCTAGAGAGAAGTGGTTCGGGCGCAGCAACACCACATACCGCCAGATCTACCAGA
JMFF024G23+           CACCGCCTAGAGAGAAGTGGTTCGGGCGCAGCAACACCACATACCGCCAAATCTACCAGA
rJMSF021A09-          CACCGCCTAGAGAGAAGTGGTTCGGGCGCAGCAACACCACATACCGCCAGATCTACCAGA
JMSF021A09+           CACCGCCTAGAGAGAAGTGGTTCGGGCGCAGCAACACCACATACCGCCAGATCTACCAGA
                      ____________________________________________________________
consensus             CACCGCCTAGAGAGAAGTGGTTCGGGCGCAGCAACACCACATACCGCCAGATCTACCAGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS007H08+           TGTGAAACGGTTCAGGACATCCAGATCTAGAGACTTTAGGAAA                 
JMFF024G23+           TGTGAAACGGTTCAGGACATCCAGATCTAGAGACTTTAGGAAAGACATCATCTGGTTAC 
rJMSF021A09-          TGTGAAACGGTTCAGGACATCCAGATCTAGAGACTTTAGGAAAGACATCATCTGGTTAC 
JMSF021A09+           TGTGAAACGGTTCAGGACATCCAGATCTAGAGACTTTAGGAAAGACATCATCTGGTTACC
                      ____________________________________________________________
consensus             TGTGAAACGGTTCAGGACATCCAGATCTAGAGACTTTAGGAAAGACATCATCTGGTTACC