Contig 002205:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMSF020N19+                          GAGTGAGTTTCCCTGTAAGTGCAAAATCTGCAAACTAGTGATCTC
                      ____________________________________________________________
consensus                            GAGTGAGTTTCCCTGTAAGTGCAAAATCTGCAAACTAGTGATCTC
 
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JMSF020N19+           AGAGTACGCCGCCGGGATTTCTCCGGCGAAGTAATTCCCACCGAGAATAAGGTTCCTCAG
                      ____________________________________________________________
consensus             AGAGTACGCCGCCGGGATTTCTCCGGCGAAGTAATTCCCACCGAGAATAAGGTTCCTCAG
 
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JMSF020N19+           TTTCTTCATCTTCGCGAACTCCACCGGGAGGTTACCGGTGAAGTTATTGTTGTAAACGTC
                      ____________________________________________________________
consensus             TTTCTTCATCTTCGCGAACTCCACCGGGAGGTTACCGGTGAAGTTATTGTTGTAAACGTC
 
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JMFF012I02+                                              CCCCGGGGAAGTCACCCGAAAAATT
JMSF020N19+           AAACACCTCAAGCTCTGTCAACCCAGCCAAGATCTCCCCGGGGAAGTCACCCGAAAAATT
                      ____________________________________________________________
consensus             AAACACCTCAAGCTCTGTCAACCCAGCCAAGATCTCCCCGGGGAAGTCACCCGAAAAATT
 
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JMFF012I02+           ATTATTCGCCAGAACAATAACTTTCACCGCCGCGAGCTTCCCCATCTCCGGCGGCAGCTC
JMSF020N19+           ATTATTCGCCAGAACAATAACTTTCACCGCCGCGAGCTTCCCCATCTCCGGCGGCAGCTC
                      ____________________________________________________________
consensus             ATTATTCGCCAGAACAATAACTTTCACCGCCGCGAGCTTCCCCATCTCCGGCGGCAGCTC
 
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JMFF012I02+           CCCTGTGAGGTAGTCGCCGGCGAGAGTCAAGCTAACAAGCCGATCCAACAGTCCAATCTC
JMSF020N19+           CCCTGTGAGGTAGTCGCCGGCGAGAGTCAAGCTAACAAGCCGATCCAACAGTCCAATCTC
                      ____________________________________________________________
consensus             CCCTGTGAGGTAGTCGCCGGCGAGAGTCAAGCTAACAAGCCGATCCAACAGTCCAATCTC
 
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JMFF012I02+           CGGCGGGAGCGTGCCGAAGAGCGGAACACCAGAAATATTTATATCAACGACCCGCGAATC
JMSF020N19+           CGGCGGGAGCGTGCCGAAGAGCGGAACACCAGAAATATTTATATCAACGACCCGCGAATC
                      ____________________________________________________________
consensus             CGGCGGGAGCGTGCCGAAGAGCGGAACACCAGAAATATTTATATCAACGACCCGCGAATC
 
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JMFF012I02+           CCCGTCACACTTCACCCCGGAGAAAAAGCAATGCGCGGCGGCGGAGGTGGCGTTGCCGAC
JMSF006G21+                                             GCGGCGGCGGAGGTGGCGTTGCCGAC
JMSF020N19+           CCCGTCACACTTCACCCCGGAGAAAAAGCAATGCGCGGCGGCGGAGGTGGCGTTGCCGAC
                      ____________________________________________________________
consensus             CCCGTCACACTTCACCCCGGAGAAAAAGCAATGCGCGGCGGCGGAGGTGGCGTTGCCGAC
 
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JMSF013P09+                         TCAGCCCGGAGCTCCGCGGCTTGACCATGGAAGCCTTAAGCTTCAG
JMFF012I02+           GTCGCGCCAATCACTCAGCCCGGAGCTCCGCGGCTTGACCATGGAAGCCTTAAGCTTCAG
JMSF006G21+           GTCGCGCCAATCACTCAGCCCGGAGCTCCGCGGCTTGACCATGGAAGCCTTAAGCTTCAG
JMSF020N19+           GTCGCGCCAATCACTCAGCCCGGAGCTCCGCGGCTTGACCATGGAAGCCTTAAGCTTCAG
                      ____________________________________________________________
consensus             GTCGCGCCAATCACTCAGCCCGGAGCTCCGCGGCTTGACCATGGAAGCCTTAAGCTTCAG
 
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JMSF013P09+           CAGCACGTCAAGATCAGAAGAGTTGGCATGGAGAATGGAAGTGGAAAACAGGAAGAAGAA
JMFF012I02+           CAGCACGTCAAGATCAGAAGAGTTGGCATGGAGAATGGAAGTGGAAAACAGGAAGAAGAA
JMSF006G21+           CAGCACGTCAAGATCAGAAGAGTTGGCATGGAGAATGGAAGTGGAAAACAGGAAGAAGAA
JMSF020N19+           CAGCACGTCAAGATCAGAAGAGTTGGCATGGAGAATGGAAGTGGAAAACAGGAAGAAGAA
                      ____________________________________________________________
consensus             CAGCACGTCAAGATCAGAAGAGTTGGCATGGAGAATGGAAGTGGAAAACAGGAAGAAGAA
 
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JMSF013P09+           AAG                                                         
JMFF012I02+           AAGGGTGAAGGAAATGAAAAGAGAGAAAGAAGAAGAATGCATCTTGAGTTTTGGGAGAGT
JMSF006G21+           AAGGGTGAAGGAAATGAAAAGAGAGAAAGAAGAAGAATGCATCTTGAGTTTTGGGAGAGT
JMSF020N19+           AAGGGTGAAGGAAATGAAAAGAGAGAAAGAAGAAGAATGCATCTTGAGTTTTGGGAGAGT
                      ____________________________________________________________
consensus             AAGGGTGAAGGAAATGAAAAGAGAGAAAGAAGAAGAATGCATCTTGAGTTTTGGGAGAGT
 
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JMFF012I02+           TATCAATGGCGGCTTAGCCGGAGACTGGAAACCAAGAATTAAAGAAATGGGAGATTTG  
JMSF006G21+           TATCAATGGCGGCTTAGCCGGAGACTGGAAACCAAGAATTAAAGAAATGGGAGATTTG  
JMSF020N19+           TATCAATGGCGGCTTAGCCGGAGACTGGAAACCAAGAATTAAAGAAATGGGAGATTTGTC
                      ____________________________________________________________
consensus             TATCAATGGCGGCTTAGCCGGAGACTGGAAACCAAGAATTAAAGAAATGGGAGATTTGTC