Contig 002201:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFS101A04+                                                              GGCAATTAG
                      ____________________________________________________________
consensus                                                                GGCAATTAG
 
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JMFS101A04+           GCTTTTCGACGGAAATGATATTCTCTGCCGCTCCAGGATCATCATCGGAAGAAAACTGCG
                      ____________________________________________________________
consensus             GCTTTTCGACGGAAATGATATTCTCTGCCGCTCCAGGATCATCATCGGAAGAAAACTGCG
 
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JMFS101A04+           AATCGTGGATAAAATGATCGCCATCAACGTCCACCGCAGAATGATCGGAATCTTCATCGA
                      ____________________________________________________________
consensus             AATCGTGGATAAAATGATCGCCATCAACGTCCACCGCAGAATGATCGGAATCTTCATCGA
 
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JMFS101A04+           ATGTAGTCGTCACTTTTTCTTCTTCTAAATTGCTTCTTTGAAATTGCGTATCACCGTAAT
                      ____________________________________________________________
consensus             ATGTAGTCGTCACTTTTTCTTCTTCTAAATTGCTTCTTTGAAATTGCGTATCACCGTAAT
 
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JMFS101A04+           CAAGATTTAGACCCTTCTCATTCTCAGGACAAACAAACAATTCTTGAACCGTAAACCTTT
                      ____________________________________________________________
consensus             CAAGATTTAGACCCTTCTCATTCTCAGGACAAACAAACAATTCTTGAACCGTAAACCTTT
 
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JMFS101A04+           TCGTTTCAGGCTGTTTCAAGAATCCCCTGACATCATTCCCAGAAACGAACTGATACTTGC
JMFS018D12+                         TTCAAGAATCCCCTGACATCATTCCCAGAAACGAACTGATACTTGC
JMSF020G07+                                      TGACATCATTCCCAGAAACGAACTGATACTTGC
                      ____________________________________________________________
consensus             TCGTTTCAGGCTGTTTCAAGAATCCCCTGACATCATTCCCAGAAACGAACTGATACTTGC
 
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JMFS101A04+           TGGAACTCGCAACCAGTTCACTCTGCAGAACAACATTGGACTCAAAATCCGTGAAGCTCC
JMFS018D12+           TGGAACTCGCAACCAGTTCACTCTGCAGAACAACATTGGACTCAAAATCCGTGAAGCTCC
JMSF020G07+           TGGAACTCGCAACCAGTTCACTCTGCAGAACAACATTGGACTCAAAATCCGTGAAGCTCC
                      ____________________________________________________________
consensus             TGGAACTCGCAACCAGTTCACTCTGCAGAACAACATTGGACTCAAAATCCGTGAAGCTCC
 
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JMFS101A04+           GGAAAACTCCTTCTTGATCGTCGTCATCTTTTCCAGAAATGAACTGATCCTGGCTAGTGC
JMFS018D12+           GGAAAACTCCTTCTTGATCGTCGTCATCTTTTCCAGAAATGAACTGATCCTGGCTAGTGC
JMSF020G07+           GGAAAACTCCTTCTTGATCGTCGTCATCTTTTCCAGAAATGAACTGATCCTGGCTAGTGC
                      ____________________________________________________________
consensus             GGAAAACTCCTTCTTGATCGTCGTCATCTTTTCCAGAAATGAACTGATCCTGGCTAGTGC
 
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JMFS101A04+           CGGCAATCAGTTCAGTCTGCAGAAACTCAAAACCCGTGAAATTCCGGTAAACTTCCTGAT
JMFS018D12+           CGGCAATCAGTTCAGTCTGCAGAAACTCAAAACCCGTGAAATTCCGGTAAACTTCCTGAT
JMSF020G07+           CGGCAATCAGTTCAGTCTGCAGAAACTCAAAACCCGTGAAATTCCGGTAAACTTCCTGAT
                      ____________________________________________________________
consensus             CGGCAATCAGTTCAGTCTGCAGAAACTCAAAACCCGTGAAATTCCGGTAAACTTCCTGAT
 
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JMFS101A04+           CATCATCGTCTTTTCCGGAACGAATCGCCTCAAAAACTCGCAAATCATTCCTGCCCTTCA
JMFS018D12+           CATCATCGTCTTTTCCGGAACGAATCGCCTCAAAAACTCGCAAATCATTCCTGCCCTTCA
JMSF020G07+           CATCATCGTCTTTTCCGGAACGAATCGCCTCAAAAACTCGCAAATCATTCCTGCCCTTCA
                      ____________________________________________________________
consensus             CATCATCGTCTTTTCCGGAACGAATCGCCTCAAAAACTCGCAAATCATTCCTGCCCTTCA
 
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JMFS101A04+           ATCTGTTCATCAGCTTGGACATTTGCCCAGGAAAACTGAATACGAGGGCACATAGAGAAA
JMFS018D12+           ATCTGTTCATCAGCTTGGCCATTTGCCCAGGAAAACTGAATACGAGGGCACATAGAGAAA
JMSF018C24+                              CATTTGCCCAGGAAAACTGAATACGAGGGCACATAGAGAAA
JMSF020G07+           ATCTGTTCATCAGCTTGGCCATTTGCCCAGGAAAACTGAATACGAGGGCACATAGAGAAA
                      ____________________________________________________________
consensus             ATCTGTTCATCAGCTTGGCCATTTGCCCAGGAAAACTGAATACGAGGGCACATAGAGAAA
 
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JMFS101A04+           CCAA                                                        
JMFS018D12+           CCAAGAAGATCCAACCCAACCCAAACATTGTTCTATATACACAAAAACTGAAAACCAAAA
JMSF018C24+           CCAAGAAGATCCAACCCAACCCAAACATTGTTCTATATACACAAAAACTGAAAACCAAAA
JMSF020G07+           CCAAGAAGATCCAACCCAACCCAAACATTGTTCTATATACACAAAAACTGAAAACCAAAA
                      ____________________________________________________________
consensus             CCAAGAAGATCCAACCCAACCCAAACATTGTTCTATATACACAAAAACTGAAAACCAAAA
 
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JMFS018D12+           ACTATATGGAAAACCAACTAAAGTAGCTTTATAGGGATGAATTTCATGATGATACGCAAG
JMSF018C24+           ACTATATGGAAAACCAACTAAAGTAGCTTTATAGGGATGAATTTCATGATGATACGCAAG
JMSF020G07+           ACTATATGGAAAACCAACTAAAGTAGCTTTATAGGGATGAATTTCATGATGATACGCAAG
                      ____________________________________________________________
consensus             ACTATATGGAAAACCAACTAAAGTAGCTTTATAGGGATGAATTTCATGATGATACGCAAG
 
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JMFS018D12+           TGAAAGCAAAAGAAAAAGCACTAACTACTAGGCAGGCAGGCAGCATAAACAATGGAAGAT
JMSF018C24+           TGAAAGCAAAAGAAAAAGCACTAACTACTAGGCAGGCAGGCAGCATAAACAATGGAAGAT
JMSF020G07+           TGAAAGCAAAAGAAAAAGCACTAACTACTAGGCAGGCAGGCAGCATAAACAATGGAAGAT
                      ____________________________________________________________
consensus             TGAAAGCAAAAGAAAAAGCACTAACTACTAGGCAGGCAGGCAGCATAAACAATGGAAGAT
 
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JMFS018D12+           GGCAAAATCTGTGGAGAAAAATGGAAGGGCATATGTGCTAACATGGTGGCGAGGATTGTG
JMSF018C24+           GGCAAAATCT                                                  
JMSF020G07+           GGCAAAATCTGTGGAGAAAAATGGAAGGGCATATGTGCTAACATGGTGGCGAGGATTGTG
                      ____________________________________________________________
consensus             GGCAAAATCTGTGGAGAAAAATGGAAGGGCATATGTGCTAACATGGTGGCGAGGATTGTG
 
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JMFS018D12+           GGGAGGAGAGAGGAAGATTTTCACACAA                                
JMSF020G07+           GGGAGGAGAGAGGAAGATTTTCACACAAGTCATGAGAGTGAGAGGTACGTCGAACTTCCA
                      ____________________________________________________________
consensus             GGGAGGAGAGAGGAAGATTTTCACACAAGTCATGAGAGTGAGAGGTACGTCGAACTTCCA