Contig 002181:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF017E22-              GGTATACTTCAGTCCTGGACCAATAAAATATATCACAAGAACTAAATTGACATTAT
                      ____________________________________________________________
consensus                 GGTATACTTCAGTCCTGGACCAATAAAATATATCACAAGAACTAAATTGACATTAT
 
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rJMSF017E22-          TATTAAAAGAAGAAGAAAAAAAGAAACTAAAGGGAACCTTCTTTCTAATAGTCTTCTAGA
                      ____________________________________________________________
consensus             TATTAAAAGAAGAAGAAAAAAAGAAACTAAAGGGAACCTTCTTTCTAATAGTCTTCTAGA
 
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rJMSF017E22-          AGATGATATTTGCACAGAAAATATCACAAGCCAACTAAACGGACAAGTCCAAGTCTTGCA
                      ____________________________________________________________
consensus             AGATGATATTTGCACAGAAAATATCACAAGCCAACTAAACGGACAAGTCCAAGTCTTGCA
 
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rJMSF017E22-          GTGCTAGGAAGTTTACCTGGGGATCACAATTTCTCTACCAAGTCTCATTTTTTATGCTCA
                      ____________________________________________________________
consensus             GTGCTAGGAAGTTTACCTGGGGATCACAATTTCTCTACCAAGTCTCATTTTTTATGCTCA
 
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rJMSF017E22-          GAACTTGAATCAGTTGCAAAGCATAAACAGATACCTCAACAGCAACAATATGCATCATCC
rJMFF016P04-              TTGAATCAGTTGGAAAGCATAACCCAATACCTCAACAGCAACAATATGCATCATCC
                      ____________________________________________________________
consensus             GAACTTGAATCAGTTGGAAAGCATAACCCGATACCTCAACAGCAACAATATGCATCATCC
 
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rJMSF017E22-          TCTGTTTTTTATTCTTATATCCTATATGTTATTCCATGGTCTGATCATCTTTGCCATTTC
rJMFF016P04-          TCTGTTTTTTATTCTTATATCCTGTACGTTATTCCATGGTCTGATCATCTTTGCCATTTC
                      ____________________________________________________________
consensus             TCTGTTTTTTATTCTTATATCCTGTATGTTATTCCATGGTCTGATCATCTTTGCCATTTC
 
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rJMSF017E22-          TTCTACCATTAATTCACCTATTGAGAACATAGCCATTTCATGTGGCTCTTCTGGCACTCC
rJMFF016P04-          TTCTACCATTAATTCACCTATTGAGAACATAGCCATTTCATGTGGCTCTTCTGGCACTCC
                      ____________________________________________________________
consensus             TTCTACCATTAATTCACCTATTGAGAACATAGCCATTTCATGTGGCTCTTCTGGCACTCC
 
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rJMSF017E22-          AACTGCCCTTGATGGGCGTGAGTGGGTTGGGGATAATACTTTGTCTTCTACTTCACCACT
rJMFF016P04-          AACTGCCCTTGATGGGCGTGAGTGGGTTGGGGATAATACTTTGTCTTCTACTTCACCACT
                      ____________________________________________________________
consensus             AACTGCCCTTGATGGGCGTGAGTGGGTTGGGGATAATACTTTGTCTTCTACTTCACCACT
 
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rJMSF017E22-          GCACATAAGTGGAAAATCCTGGACATCTAAAGCCCAGCATAAAGCCTCTCTCATGATTGA
rJMFF016P04-          GCACATAAGTGGAAAATCCTGGACATCTAAAGCCCAGCATAAAGCCTCTCTCATGATTGA
                      ____________________________________________________________
consensus             GCACATAAGTGGAAAATCCTGGACATCTAAAGCCCAGCATAAAGCCTCTCTCATGATTGA
 
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rJMSF017E22-          TCCACTTCCATATCAGACAGCTCGGACCTCTCGCCATGAGTTCAGCTACCGGTTCTCAGT
rJMFF016P04-          TCCACTTCCATATCAGACAGCTCGGACCTCTCGCCATGAGTTCAGCTACCGGTTCTCGGT
                      ____________________________________________________________
consensus             TCCACTTCCATATCAGACAGCTCGGACCTCTCGCCATGAGTTCAGCTACCGGTTCTCGGT
 
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rJMSF017E22-          CCAGCCGGGCCAGAAATTCATCCGCTTGCACTTCAACCCAGCGCCATACAATGGCTTCAA
rJMFF016P04-          CCAGCCGGGCCAGAAATTCATCCGCTTGCACTTCAACCCAGCGCCATACAATGGCTTCAA
                      ____________________________________________________________
consensus             CCAGCCGGGCCAGAAATTCATCCGCTTGCACTTCAACCCAGCGCCATACAATGGCTTCAA
 
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rJMSF017E22-          GAAGTCCATAGCCCTTTTTACTGTCAAAGCTGGTCCATACACTCTCCTCAGCAATTTCAG
rJMFF016P04-          GAAGTCCATAGCCCTTTTTACTGTCAAAGCTGGTCCATACACTCTCCTCAGCAATTTCAG
                      ____________________________________________________________
consensus             GAAGTCCATAGCCCTTTTTACTGTCAAAGCTGGTCCATACACTCTCCTCAGCAATTTCAG
 
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rJMSF017E22-          CCCCTCCCTCACTGCTGATGCTCTAGGTGTCAAATTTCTCAAGAAGNAATACTGTGTTAA
rJMFF016P04-          CCCCTCCCTCACTGCTGATGCTCTAGGTGTCAAATTTCTCAAGAANGAATACTGTGTTAA
rJMSF053O03-                                        CAAATTTCTCAAGAAGGAATACTGTGTTAA
                      ____________________________________________________________
consensus             CCCCTCCCTCACTGCTGATGCTCTAGGTGTCAAATTTCTCAAGAAGGAATACTGTGTTAA
 
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rJMSF017E22-          TGTACAGGAAA                                                 
rJMFF016P04-          TGTACAGGAAAGTGAGGTGTTGACTATAACATTCACCCCATCTCAAGAAAGAAAGTTTTC
rJMSF053O03-          TGTACAGGAAAGTGAGGTGTTGACTATAACATTCACCCCATCTCAAGAAAGAAAGTTTTC
JMFF016P04+                                                     TCAAGAAAGAAAGTTTTC
                      ____________________________________________________________
consensus             TGTACAGGAAAGTGAGGTGTTGACTATAACATTCACCCCATCTCAAGAAAGAAAGTTTTC
 
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rJMFF016P04-          AGGAAATGGTTATGCTTTCG                                        
rJMSF053O03-          AGGAAATGTTTATGCTTTCGTCAATGGCATTGAGATCATCTCCATGCCTACTGGTC    
JMFF016P04+           AGGAAATGTTTATGCTTTCGTCAATGGCATTGAGATCATCTCCATGCCTACTGGTCTTTA
                      ____________________________________________________________
consensus             AGGAAATGTTTATGCTTTCGTCAATGGCATTGAGATCATCTCCATGCCTACTGGTCTTTA
 
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JMFF016P04+           CTTCACCCCAGAGGGAGACCTGGGTGCCCATGTTGTAGGCCAAAAGCACAGATTCTACAT
JMFN037D17+                 CCCAGAGGGAGACCTGGGTGCCCATGTGGTAGGCCAAAAGCACAGATTCTACAT
                      ____________________________________________________________
consensus             CTTCACCCCAGAGGGAGACCTGGGTGCCCATGTTGTAGGCCAAAAGCACAGATTCTACAT
 
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JMFF016P04+           TGATACAGCTACAGCACTGCAGATGATTCAGAGATTAAACATCGGGGGATGGTCAATCCC
JMFN037D17+           TGATACAGCTACAGCACTGCAGATGATTCAGAGATTAAACATCGGGGGATGGTCAATCCC
                      ____________________________________________________________
consensus             TGATACAGCTACAGCACTGCAGATGATTCAGAGATTAAACATCGGGGGATGGTCAATCCC
 
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JMFF016P04+           ATCCATTGAAGATGTCAGCATGTTTCGTGACTGGAAAGATGACTACAACTACGTGTTAAA
JMFN037D17+           ATCCATTGAAGATGTCAGCATGTTTCGTGACTGGAAAGATGACTACAACTACGTGTTAAA
                      ____________________________________________________________
consensus             ATCCATTGAAGATGTCAGCATGTTTCGTGACTGGAAAGATGACTACAACTACGTGTTAAA
 
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JMFF016P04+           TGGAGTTGGTGCTGCATCAACTTATACAACCATGACAATAGAGTATGCAGACATGCTGAC
JMFN037D17+           TGGAGTTGGTGCTGCATCAACTTATACAACCATGACAATAGAGTATGCAGACATGCTGAC
                      ____________________________________________________________
consensus             TGGAGTTGGTGCTGCATCAACTTATACAACCATGACAATAGAGTATGCAGACATGCTGAC
 
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JMFF016P04+           ACATGTTGCACCTCCCAAAGTGTACCAAACAGCAAGGTCAGTGCATCCAGGCAAGCAGCA
JMFN037D17+           ACATGTTGCACCTCCCAAAGTGTACCAAACAGCAAGGTCAGTGCATCCAGGCAAGCAGCA
                      ____________________________________________________________
consensus             ACATGTTGCACCTCCCAAAGTGTACCAAACAGCAAGGTCAGTGCATCCAGGCAAGCAGCA
 
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JMFF016P04+           GCTCATTGCTCACAATCTCACATGGATAATTCCAGTAAATTTAGGATTCAGGTACCTAGT
JMFN037D17+           GCTCATTGCTCACAATCTCACATGGATAATTCCAGTAAATTTAGGATTCAGGTACCTAGT
                      ____________________________________________________________
consensus             GCTCATTGCTCACAATCTCACATGGATAATTCCAGTAAATTTAGGATTCAGGTACCTAGT
 
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JMFF016P04+           CAGGCTCCATTTCTGTGAATTTGAACCTGTCAACAGTAAAAACCTCGTGACAGATCCGAC
JMFN037D17+           CAGGCTCCATTTCTGTGAATTTGAACCTGTCAACAGTAAAAACCTCGTGACAGATCCGAC
JMSF053O03+                                     CTGTCAACAGTAAAAACCTCGTGACAGATCCGAC
                      ____________________________________________________________
consensus             CAGGCTCCATTTCTGTGAATTTGAACCTGTCAACAGTAAAAACCTCGTGACAGATCCGAC
 
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JMFF016P04+           GCATCGAGTGCAT                                               
JMFN037D17+           GCATCGAGTGCATACACTTCAACCAGAAAATGGTCGCCCTAAGAGGTCCTTCAAGTTAGG
JMSF053O03+           GCATCGAGTGCATCGTTTTCGTCCAGAAAATGGTCGCCCTAGGAGGTCCTTCAAGTTAGG
JMSF017E22+                                                                      G
                      ____________________________________________________________
consensus             GCATCGAGTGCATCGTTTTCGTCCAGAAAATGGTCGCCCTAGGAGGTCCTTCAAGTTAGG
 
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JMFN037D17+           GCTGAACGATACAGACGGCGCTCATGTTCATCGGTCAACCATACACTTCATACTTGCGGC
JMSF053O03+           GCTGAACGATACAGACGGCGCTCATGTTCATCGGTCAGCCATACACTTCATACTTGCGGC
JMSF017E22+           GCTGAACGATACAGACGGCGCTCATGTTCATCGGTCAGCCATACACTTCATACTTGCGGC
                      ____________________________________________________________
consensus             GCTGAACGATACAGACGGCGCTCATGTTCATCGGTCAGCCATACACTTCATACTTGCGGC
 
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JMFN037D17+           ATTATCC                                                     
JMSF053O03+           ATTATCCAGACTGCCAGGAATCTCGTTCCCCTGATAATAATAATAGTAATAAGGACAAAT
JMSF017E22+           ATTATCCAGACTGCCAGGAATCTCGTTCCCCTGATAATAATAATAGTAATAAGGACAAAT
                      ____________________________________________________________
consensus             ATTATCCAGACTGCCAGGAATCTCGTTCCCCTGATAATAATAATAGTAATAAGGACAAAT
 
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JMSF053O03+           ATGGAGATAGCTGAATGTGTAATCGCCGCTAACCTCCGCATCATTAATGCTTCTTCTTTC
JMSF017E22+           ATGGAGATAGCTGAATGTGTAATCGCCGCTAACCTCCGCATCATTAATGCTTCTTCTTTC
                      ____________________________________________________________
consensus             ATGGAGATAGCTGAATGTGTAATCGCCGCTAACCTCCGCATCATTAATGCTTCTTCTTTC
 
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JMSF053O03+           GCCGCCGATTACATGGAAGTGGACAGCGGCGAAGAATCC                     
JMSF017E22+           GCCGCCGATTACATGGAAGTGGACAGCGGCGAAGAATCCGACGGGCTTAAGCTATCCTCC
                      ____________________________________________________________
consensus             GCCGCCGATTACATGGAAGTGGACAGCGGCGAAGAATCCGACGGGCTTAAGCTATCCTCC