Contig 002170:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF003J10Sequence396002170 (3)782010986 (3)ref|XP_006347629.1|6e-33PREDICTED: uncharacterized protein LOC102598943 isoform X1 [Solanum tuberosum]
JMSF005K12Sequence356002170 (3)
JMSF015K11Sequence450002170 (3)743010986 (3)ref|XP_006347630.1|6e-33PREDICTED: uncharacterized protein LOC102598943 isoform X2 [Solanum tuberosum]

Alignment

This contig is upended


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JMSF015K11+                                         AATCCCCAGCTTTCCAAAACTGCTNGGAGC
                      ____________________________________________________________
consensus                                           AATCCCCAGCTTTCCAAAACTGCTNGGAGC
 
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JMSF003J10+                   ACAATGCAGGTCGGCACAGCACGACCGCTACTGGTCTCTGCCGGAGCTGGAG
JMSF005K12+                                                           CCGGAGCTGGAG
JMSF015K11+           TAGTTTCCACAATGCAGGTCGGCACAGCACGACCGCTACTGGTCTCTGCCGGAGCTGGAG
                      ____________________________________________________________
consensus             TAGTTTCCACAATGCAGGTCGGCACAGCACGACCGCTACTGGTCTCTGCCGGAGCTGGAG
 
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JMSF003J10+           GCGGCAAGAGGAGAGGCTGCTCCACGGGCTCATGCAGAGGGTCTAAGAACCCCAATGGTA
JMSF005K12+           GCGGCAAGAGGAGAGGCTGCTCCACGGGCTCATGCAGAGGGTCTAAGAACCCCAATGGTA
JMSF015K11+           GCGGCAAGAGGAGAGGCTGCTCCACGGGCTCATGCAGAGGGTCTAAGAACCCCAATGGTA
                      ____________________________________________________________
consensus             GCGGCAAGAGGAGAGGCTGCTCCACGGGCTCATGCAGAGGGTCTAAGAACCCCAATGGTA
 
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JMSF003J10+           ACGCGACGGACGACGTCTCCGCACTCTTTTGCTTCTTCCTGGGCCTGCCGTCCTCGGAGT
JMSF005K12+           ACGCGACGGACGACGTCTCCGCACTCTTTTGCTTCTTCCTGGGCCTGCCGTCCTCGGAGT
JMSF015K11+           ACGCGACGGACGACGTCTCCGCACTCTTTTGCTTCTTCCTGGGCCTGCCGTCCTCGGAGT
                      ____________________________________________________________
consensus             ACGCGACGGACGACGTCTCCGCACTCTTTTGCTTCTTCCTGGGCCTGCCGTCCTCGGAGT
 
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JMSF003J10+           CCGAATCGGAGTCGCTGCTGCTGAGATCGATAACGGACATAGGCATCGTGGCCGTAGAAG
JMSF005K12+           CCGAATCGGAGTCGCTGCTGCTGAGATCGATAACGGACATAGGCATCGTGGCCGTAGAAG
JMSF015K11+           CCGAATCGGAGTCGCTGCTGCTGAGATCGATAACGGACATAGGCATCGTGGCCGTAGAAG
                      ____________________________________________________________
consensus             CCGAATCGGAGTCGCTGCTGCTGAGATCGATAACGGACATAGGCATCGTGGCCGTAGAAG
 
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JMSF003J10+           GTGGTTGCGACCCATGGTTCTCGAAGATTTCCTTCTTAACTCGATGCTTCGGATTCCCCA
JMSF005K12+           GTGGTTGCGACCCATGGTTCTCGAAGATTTCCTTCTTAACTCGATGCTTCGGATTCCCCA
JMSF015K11+           GTGGTTGCGACCCATGGTTCTCGAAGATTTCCTTCTTAACTCGATGCTTCGGATTCCCCA
                      ____________________________________________________________
consensus             GTGGTTGCGACCCATGGTTCTCGAAGATTTCCTTCTTAACTCGATGCTTCGGATTCCCCA
 
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JMSF003J10+           TTAGATGAAAAAACAGAGTTCAAATCAAAGAGGGGCCTTCTAAATTTTATTTTATTTTTA
JMSF005K12+           TTAGATGAAAAAACAGAGTTCAAATCAAAGAGGGGCCTTCTAAATTTTATTTTATTTTTA
JMSF015K11+           TTAGATGAAAAAACAGAGTTCAAATCAAAGAGGGGCCTTCTAAATTTTATTTTATTTTTA
                      ____________________________________________________________
consensus             TTAGATGAAAAAACAGAGTTCAAATCAAAGAGGGGCCTTCTAAATTTTATTTTATTTTTA
 
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JMSF003J10+           GGTGAAGAAAGGGGAGAGAAGCAAGAGAATTCAATGTACTGTC                 
JMSF005K12+           GGTGAAGAAAGGGGAGAGAAGCAAGAGAATTCAATGTACTGTC                 
JMSF015K11+           GGTGAAGAAAGGGGAGAGAAGCAAGAGAATTCAATGTACTGTCAAAGCTTCGAAAAGCCC
                      ____________________________________________________________
consensus             GGTGAAGAAAGGGGAGAGAAGCAAGAGAATTCAATGTACTGTCAAAGCTTCGAAAAGCCC