Contig 002153:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMCP008E04Sequence496002153 (2)ref|XP_009590328.1|100PREDICTED: SUN domain-containing protein 3-like [Nicotiana tomentosiformis]
JMSF013D18Sequence422002153 (2)751007544 (3)ref|XP_002523394.1|2e-81conserved hypothetical protein [Ricinus communis] gb|EEF38973.1| conserved hypot

Alignment

This contig is upended


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JMCP008E04+               TCCAGaaCCGCAACTTTGCCCaCGAAATCGTCAGAGATCACGGTGAGTCCGTCGGC
                      ____________________________________________________________
consensus                 TCCAGTTCCGCAACTTTGCCCTCGAAATCGTCAGAGATCACGGTGAGTCCGTCGGC
 
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JMCP008E04+           ATTTCGACTTCCCGAATCGAAAAAAATTCTCCGAACCATCTGAATTAAACCTACTATGAT
                      ____________________________________________________________
consensus             ATTTCGACTTCCCGAATCGAAAAAAATTCTCCGAACCATCTGAATTAAACCTACTATGAT
 
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JMCP008E04+           TAACAAAAGACAGAAATTCTTAGTGAATATACTAACAACCGTGAGCCAGCGCGGTTTCTC
                      ____________________________________________________________
consensus             TAACAAAAGACAGAAATTCTTAGTGAATATACTAACAACCGTGAGCCAGCGCGGTTTCTC
 
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JMCP008E04+           GGGCTTGGAAGATTTCTTCGTGGTCCCCGCACGGCGAGACGAAGGCGCGGCGCCGTTTGA
JMSF013D18+                                                                     GA
                      ____________________________________________________________
consensus             GGGCTTGGAAGATTTCTTCGTGGTCCCCGCACGGCGAGACGAAGGCGCGGCGCCGTTTGA
 
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JMCP008E04+           GTTGGGCAAGGGCTTCCTGACCGCTTGAATTGCATCTCTAGTTTCCGTTCTAATGGAATG
JMSF013D18+           GTTGGGCAAGGGCTTCCTGACCNCNTGAATTGCATCTNTAGTTTCCNTTNTAATGGAATG
                      ____________________________________________________________
consensus             GTTGGGCAAGGGCTTCCTGACCGCTTGAATTGCATCTCTAGTTTCCGTTCTAATGGAATG
 
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JMCP008E04+           TTGACTTAGATCTTTGATAGCAGCGTCGCCTGCGGCGTGTTTATCGTTGCCTGTGGATGG
JMSF013D18+           TTGACTTAGATNTTTGATAGCAGCGTCNCCTGCGGCGTGTTTATCGTTGCCTGTGGANGG
                      ____________________________________________________________
consensus             TTGACTTAGATCTTTGATAGCAGCGTCGCCTGCGGCGTGTTTATCGTTGCCTGTGGATGG
 
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JMCP008E04+           AGACGCGACGGCGGCTGCAGCGGCCGCGGCCGCTAAGTTGGATTCGGCAATGTCCAAAGC
JMSF013D18+           AGACGCGACGGCGGCTGCAGCGGCCGCGGCCGCTAANTTGGATTNGGCAATGTCCAAAGC
                      ____________________________________________________________
consensus             AGACGCGACGGCGGCTGCAGCGGCCGCGGCCGCTAAGTTGGATTCGGCAATGTCCAAAGC
 
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JMCP008E04+           GGCGGGCTGCCTTTTCTCGACGGCGGTTCGGCGGCGGGTGGCGACGGAGGACGGATTGGC
JMSF013D18+           GGCGGGCTGCCTTTTNTNGACGGCGGTTTGGCGGCGGGTGGCGACGGAGGACGGATTGGC
                      ____________________________________________________________
consensus             GGCGGGCTGCCTTTTCTCGACGGCGGTTTGGCGGCGGGTGGCGACGGAGGACGGATTGGC
 
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JMCP008E04+           GGTGATGGAC                                                  
JMSF013D18+           GGTGATGGACCCTGTGGAAGCNGACNTTGATTAAATCCTTTNTAAAGAAACTTTTTNTTG
                      ____________________________________________________________
consensus             GGTGATGGACCCTGTGGAAGCNGACNTTGATTAAATCCTTTNTAAAGAAACTTTTTNTTG
 
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JMSF013D18+           AAAAAATTCCTAAAATTTACTTGGCNATAATTNTTGNGAAATCAAAAAAAAAAACCCTAA
                      ____________________________________________________________
consensus             AAAAAATTCCTAAAATTTACTTGGCNATAATTNTTGNGAAATCAAAAAAAAAAACCCTAA
 
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JMSF013D18+           GCTAGGACAAGAAGAAGAAGGAGAAGGCAAAATCGAATTGGGGAGGAGCGTGAGATCGTC
                      ____________________________________________________________
consensus             GCTAGGACAAGAAGAAGAAGGAGAAGGCAAAATCGAATTGGGGAGGAGCGTGAGATCGTC