| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMSF012D05 | Sequence | 437 | 002138 (4) | gb|AGT57961.1| | 3e-59 | 4-alpha-glucanotransferase [Ipomoea batatas] | 758 | 005800 (4) | gb|AGT57961.1| | 3e-87 | 4-alpha-glucanotransferase [Ipomoea batatas] |
| JMSF029P17 | Sequence | 631 | 002138 (4) | gb|AGT57961.1| | 1e-108 | 4-alpha-glucanotransferase [Ipomoea batatas] | 178 | 005800 (4) | |||
| JMSF043K03 | Sequence | 714 | 002138 (4) | gb|AGT57961.1| | 1e-128 | 4-alpha-glucanotransferase [Ipomoea batatas] | 743 | 005800 (4) | gb|AGT57961.1| | 4e-70 | 4-alpha-glucanotransferase [Ipomoea batatas] |
| JMSF051L15 | Sequence | 630 | 002138 (4) | gb|AGT57961.1| | 7e-108 | 4-alpha-glucanotransferase [Ipomoea batatas] | 731 | 005800 (4) | gb|AGT57961.1| | 4e-81 | 4-alpha-glucanotransferase [Ipomoea batatas] |
This contig is upended
. : . : . : . : . : . :
JMSF043K03+ ACGAAATTGTTCAAGCTCATACTTGAGTTTCCCTTGACTGGAAATAAGCCTCTCT
____________________________________________________________
consensus ACGAAATTGTTCAAGCTCATACTTGAGTTTCCCTTGACTGGAAATAAGCCTCTCT
. : . : . : . : . : . :
JMSF043K03+ GCAGCCTTGGCTATTAGAGGATCCTTTATTTCAGCAACAGTTGCGTAGTCCACACGATCC
JMSF029P17+ TCAGCAACAGTTGCGTAGTCCACACGATCC
JMSF051L15+ TCAGCAACAGTTGCGTAGTCCACACGATCC
____________________________________________________________
consensus GCAGCCTTGGCTATTAGAGGATCCTTTATTTCAGCAACAGTTGCGTAGTCCACACGATCC
. : . : . : . : . : . :
JMSF043K03+ ATGACTAGAGGTTCTGGAAGCTCCTCTTTCATTAGCAAGCCATCATCCACAAGTTCTTCA
JMSF029P17+ ATGACTAGAGGTTCTGGAAGCTCCTCTTTCATTAGCAAGCCATCATCCACAAGTTCTTCA
JMSF051L15+ ATGACTAGAGGTTCTGGAAGCTCCTCTTTCATTAGCAAGCCATCATCCACAAGTTCTTCA
____________________________________________________________
consensus ATGACTAGAGGTTCTGGAAGCTCCTCTTTCATTAGCAAGCCATCATCCACAAGTTCTTCA
. : . : . : . : . : . :
JMSF043K03+ AGAGAAATCAAAAGGGTATTGCCACAATTTGCATCCTGGCCTGAATAGGGTGATCCTTCT
JMSF029P17+ AGAGAAATCAAAAGGGTATTGCCACAATTTGCATCCTGGCCTGAATAGGGTGATCCTTCT
JMSF051L15+ AGAGAAATCAAAAGGGTATTGCCACAATTTGCATCCTGGCCTGAATAGGGTGATCCTTCT
____________________________________________________________
consensus AGAGAAATCAAAAGGGTATTGCCACAATTTGCATCCTGGCCTGAATAGGGTGATCCTTCT
. : . : . : . : . : . :
JMSF043K03+ TCATTAGCTCTCCTTCCAGGAGGGACAAGAGGAAGTACCTGCCAAAGAGAGCAACCGGCA
JMSF029P17+ TCATTAGCTCTCCTTCCAGGAGGGACAAGAGGAAGTACCTGCCAAAGAGAGCAACCGGCA
JMSF051L15+ TCATTAGCTCTCCTTCCAGGAGGGACAAGAGGAAGTACCTGCCAAAGAGAGCAACCGGCA
JMSF012D05+ AAAGAGAGCAACCGGCA
____________________________________________________________
consensus TCATTAGCTCTCCTTCCAGGAGGGACAAGAGGAAGTACCTGCCAAAGAGAGCAACCGGCA
. : . : . : . : . : . :
JMSF043K03+ TCGTGAAGCCAATCGAGGAACCGGAAAGCCTGGGGGCCAAGGTCTCCAATGCCGTAGGGG
JMSF029P17+ TCGTGAAGCCAATCGAGGAACCGGAAAGCCTGGGGGCCAAGGTCTCCAATGCCGTAGGGG
JMSF051L15+ TCGTGAAGCCAATCGAGGAACCGGAAAGCCTGGGGGCCAAGGTCTCCAATGCCGTAGGGG
JMSF012D05+ TCGTGAAGCCAATCGAGGAACCGGAAAGCCTGGGGGCCAAGGTCTCCAATGCCGTAGGGG
____________________________________________________________
consensus TCGTGAAGCCAATCGAGGAACCGGAAAGCCTGGGGGCCAAGGTCTCCAATGCCGTAGGGG
. : . : . : . : . : . :
JMSF043K03+ CCAGGAAACGACGTCGGATGGAGGAGCACTCCAGCTCGTCTGCGATCACTGGTAGTGGAG
JMSF029P17+ CCAGGAAACGACGTCGGATGGAGGAGCACTCCAGCTCGTCTGCGATCACTGGTAGTGGAG
JMSF051L15+ CCAGGAAACGACGTCGGATGGAGGAGCACTCCAGCTCGTCTGCGATCACTGGTAGTGGAG
JMSF012D05+ CCAGGAAACGACGTCGGATGGAGGAGCACTCCAGCTCGCCTGCGATCACTGGTAGTGGAG
____________________________________________________________
consensus CCAGGAAACGACGTCGGATGGAGGAGCACTCCAGCTCGTCTGCGATCACTGGTAGTGGAG
. : . : . : . : . : . :
JMSF043K03+ TAGCGGTTGGGGAGCCAATCCGAGTAATCCAGCGGCAAGTCATCGCCGACGGCGGTCGTG
JMSF029P17+ TAGCGGTTGGGGAGCCAATCCGAGTAATCCAGCGGCAAGTCATCGCCGACGGCGGTCGTG
JMSF051L15+ TAGCGGTTGGGGAGCCAATCCGAGTAATCCAGCGGCAAGTCATCGCCGACGGCGGTCGTG
JMSF012D05+ TAGCGGTTGGGGAGCCAATCCGAGTAATCCAGCGGCAAGTCATCGCCGACGGCGGTCGTG
____________________________________________________________
consensus TAGCGGTTGGGGAGCCAATCCGAGTAATCCAGCGGCAAGTCATCGCCGACGGCGGTCGTG
. : . : . : . : . : . :
JMSF043K03+ ACGGTTCCGTTTTGAAAGCTCACCGCGAGCAACGGTCCCCGGCGATTAAAACCGCGAGGT
JMSF029P17+ ACGGTTCCGTTTTGAAAGCTCACCGCGAGCAACGGTCCCCGGCGATTAAAACCGCGAGGT
JMSF051L15+ ACGGTTCCGTTTTGAAAGCTCACCGCGAGCAACGGTCCCCGGCGATTAAAACCGCGAGGT
JMSF012D05+ ACGGTTCCGTTTTGAAAGCTCACCGCGAGCAACGGTCCCCGGCGATTAAAACCGCGAGGT
____________________________________________________________
consensus ACGGTTCCGTTTTGAAAGCTCACCGCGAGCAACGGTCCCCGGCGATTAAAACCGCGAGGT
. : . : . : . : . : . :
JMSF043K03+ GGTGGAGTGAAGAGAGCGGCGGAGGTGGCCGAGAGCTTGGCGTTGGAGGGAGAGAGTAGA
JMSF029P17+ GGTGGAGTGAAGAGAGCGGCGGAGGTGGCCGAGAGCTTGGCGTTGGAGGGAGAGAGNAGA
JMSF051L15+ GGTGGAGTGAAGAGAGCGGCGGAGGTGGCCGAGAGCTTGGCGTTGGAGGGAGAGAGTAGA
JMSF012D05+ GGTGGAGTGAAGAGAGCGGCGGAGGTGGCCGAGAGCTTGGCGTTGGAGGGAGAGAGNAGA
____________________________________________________________
consensus GGTGGAGTGAAGAGAGCGGCGGAGGTGGCCGAGAGCTTGGCGTTGGAGGGAGAGAGTAGA
. : . : . : . : . : . :
JMSF043K03+ GAGAGAGGGAGTGAGAGAGAAGTGTGAAGCGCCATTATTGAGGAACAGAACGGAATTGAT
JMSF029P17+ GAGAGAGGGAGTGAGAGAGAAGTGTGAAGCGCCATTATTGAGGAACAGAACGGAATTGAT
JMSF051L15+ GAGAGAGGGAGTGAGAGAGAAGTGTGAAGCGCCATTATTGAGGAACAGAACGGAATTGAT
JMSF012D05+ GAGAGAGGGAGTGAGAGAGAAGTGTGAAGCGCCATTATTGAGGAACAGAACGGAATTGAT
____________________________________________________________
consensus GAGAGAGGGAGTGAGAGAGAAGTGTGAAGCGCCATTATTGAGGAACAGAACGGAATTGAT
. : . : . : . : . : . :
JMSF043K03+ TAGTGAGAGAGAATTGAATTCTGATTGTTCATTGCTTCTGAGGAGTTAACGGTGAGCC
JMSF029P17+ TAGTGAGAGAGAATTGAATTCTGATTGTTCATTGCTTCTGAGGAGTTAACGGTGAGCC
JMSF051L15+ TAGTGAGAGAGAATTGAATTCTGATTGTTCATTGCTTCTGAGGAGTTAACGGTGAGCC
JMSF012D05+ TAGTGAGAGAGAATTGAATTCTGATTGTTCATTGCTTCTGAGGAGTTAACGGTGAGCCTC
____________________________________________________________
consensus TAGTGAGAGAGAATTGAATTCTGATTGTTCATTGCTTCTGAGGAGTTAACGGTGAGCCTC