| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF003G24 | Sequence | 141 | 002137 (11) | ||||||||
| JMFF022P23 | Sequence | 484 | 002137 (11) | ref|XP_010251701.1| | 4e-46 | PREDICTED: somatic embryogenesis receptor kinase 1 [Nelumbo nucifera] | 723 | 002137 (11) | ref|XP_009777835.1| | 1e-90 | PREDICTED: BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1-like [Nic |
| JMFF032M21 | Sequence | 588 | 002137 (11) | gb|KHG12648.1| | 5e-69 | brassinosteroid insensitive 1-associated receptor kinase 1 -like protein [Gossy | 584 | 002137 (11) | gb|ACU19288.1| | 1e-76 | unknown [Glycine max] |
| JMFF039J02 | Sequence | 580 | 002137 (11) | gb|KHG12648.1| | 1e-74 | brassinosteroid insensitive 1-associated receptor kinase 1 -like protein [Gossy | |||||
| JMFF044I11 | Sequence | 630 | 002137 (11) | gb|KHG12648.1| | 1e-80 | brassinosteroid insensitive 1-associated receptor kinase 1 -like protein [Gossy | 603 | 002137 (11) | gb|KJB56059.1| | 5e-84 | hypothetical protein B456_009G105500 [Gossypium raimondii] |
| JMFN029A24 | Sequence | 625 | 002137 (11) | ref|XP_009777835.1| | 7e-83 | PREDICTED: BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1-like [Nic | |||||
| JMSF012C22 | Sequence | 219 | 002137 (11) | 607 | 002137 (11) | ref|XP_009339518.1| | 1e-71 | PREDICTED: somatic embryogenesis receptor kinase 1-like [Pyrus x bretschneideri | |||
This contig is upended
. : . : . : . : . : . :
rJMSF012C22- GTATTTGATAAAGCTACAA
____________________________________________________________
consensus GTATTTGATAAAGCTACAA
. : . : . : . : . : . :
rJMSF012C22- CTTTCANGCATCTTACAGGGTCACACACATACNNGCTTAGGTAGGTAAATAACAGGGGAT
____________________________________________________________
consensus CTTTCANGCATCTTACAGGGTCACACACATACNNGCTTAGGTAGGTAAATAACAGGGGAT
. : . : . : . : . : . :
rJMFF044I11- GAGCAGTTTGTATCATAAC
rJMFF032M21- AGCAGTTTGTATCATAAC
rJMSF012C22- CTTCANGGACAGTTGCCTATTCATCANGTCTTANCCNCTAANAGCAGTTNGTATCANAAC
rJMFF022P23- AGCAGTTTGTATCATAAC
____________________________________________________________
consensus CTTCANGGACAGTTGCCTATTCATCANGTCTTANCCNCTAAGAGCAGTTTGTATCATAAC
. : . : . : . : . : . :
rJMFF044I11- TTGCAAGTCCCATCAACTCTGGACCTTCCAGTCTAGGATTATTCTCAAAGTTGTTTAGTG
rJMFF032M21- TTGCAAGTCCCATCAACTCTGGACCTTCCAGTCTAGGATTATTCTCAAAGTTGTTTAGNG
rJMSF012C22- TTGCAAGTCCCATCAACTCNGGACCTTCCAGNCTAGGATTATTCNCAAAGTTGTTTAGGG
rJMFF022P23- TTGCAAGTCCCATCAACTCTGGACCTTCCANTCTAGGATTATTCTCAAAGTTGTTTANTG
____________________________________________________________
consensus TTGCAAGTCCCATCAACTCTGGACCTTCCAGTCTAGGATTATTCTCAAAGTTGTTTAGTG
. : . : . : . : . : . :
rJMFF044I11- GAATATGCTCAAATGGACCAGAAGTCGGAATTGTTCCACACAAATTGTTATTTGATACAT
rJMFF032M21- GAACATGCTCAAATGGACCAAAAGTCGGAATTGTTCCACACAAATTGTTATTTGATACAT
rJMSF012C22- GAATATGCNCAAANGGACCAAAAGTCGGAATTGTNCCNCACAAATTGTTATTTGATACAT
rJMFF022P23- GAATATGCTCAAATGGACCANAANTCGGAATTGTTCCACACAAATTGTTATTTGATACNT
____________________________________________________________
consensus GAATATGCTCAAATGGACCAAAAGTCGGAATTGTTCCACACAAATTGTTATTTGATACAT
. : . : . : . : . : . :
rJMFF044I11- CCACAACTTTAAGAGTAGAAACACTAGTAAGTTCCCGTGGGATTGGCCCGGTTAACTTAT
rJMFF032M21- CCACAACTTTAAAAGTAAAAACACTAGTAAGTTCCCGNGGGATTGGCCCGGTTAACTTAT
rJMSF012C22- CCNCAACTTTAANAGTANAAACNCTAGTAAGTTCCCGNGGGATTGGCCCGGTTAACTTAT
rJMFF022P23- CCACAACTTTAANAGTAAAAACNCTANTAAGTTCCCGTGGGATTGGCCCGGTTAACTTAT
JMFN029A24+ AGTAGAAACACTAGTAAGTTCCCGTGGGATTGGCCCGGTTAACTTAT
JMFF039J02+ CCGGTTAACTTAT
JMFF044I11+ AGTAAGTTCCCGTGGGATTGGCCCGGTTAACTTAT
____________________________________________________________
consensus CCACAACTTTAAGAGTAGAAACACTAGTAAGTTCCCGTGGGATTGGCCCGGTTAACTTAT
. : . : . : . : . : . :
rJMFF044I11- TATCATTAAGGCGCAGGAAAACAAGTGCTTTCAATTTCCCCAATGAAGGAGGAATTGTAC
rJMFF032M21- TATCATTAAGGCGCAGGAAAACAAGNGCTTTCAATTTCCCCAATGAAGGAGGAATTGTAC
rJMSF012C22- TATCATTAAGGCGCAGGAAAACAAGNGCTTTCAATTTCCCCAANGAAGGAGGAATTGTAC
rJMFF022P23- TATCATTAAGGCGCAGGAAAACAANTGCTTTCAATTTCCCCAATGAAGGAGGAATTGTAC
JMFN029A24+ TATCATTAAGGCGCAGGAAAACAAGTGCTTTCAATTTCCCCAATGAAGGAGGAATTGTAC
JMFF039J02+ TATCATTAAGGCGCAGGAAAACAAGTGCTTTCAATTTCCCCAATGAAGGAGGAATTGTAC
JMFF044I11+ TATCATTAAGGCGCAGGAAAACAAGTGCTTTCAATTTCCCCAATGAAGGAGGAATTGTAC
JMFF032M21+ GCGCAGGAAAACAAGTGCTTTCAATTTCCCCAATGAAGGAGGAATTGTAC
____________________________________________________________
consensus TATCATTAAGGCGCAGGAAAACAAGTGCTTTCAATTTCCCCAATGAAGGAGGAATTGTAC
. : . : . : . : . : . :
rJMFF044I11- CAGAGATATTGTTGTTGTACAGATCCAAACTTATAAGGCTCTTCAAGTTACCGAGTTCAA
rJMFF032M21- CAAANATATTGTTGTTGTACANATCCAAACTTATAAGGCTCTTCAAGTTACCGAGTTCAA
rJMSF012C22- CAAANATATTGTTGTTGTACANATCCAAACTTATAAGGCTCTTCAAGTTACCGAGTTCAA
rJMFF022P23- CAGANATATTGTTGTTGCNCANATCCNAACTTATAAGGCTCTTCAAGTTACCGAGTTCAA
JMFN029A24+ CAGAGATATTGTTGTTGTACAGATCCAAACTTATAAGGCTCTTCAAGTTACCGAGTTCAA
JMFF039J02+ CAGAGATATTGTTGTTGTACAGATCCAAACTTATAAGGCTCTTCAAGTTACCGAGTTCAA
JMFF044I11+ CAGAGATATTGTTGTTGTACAGATCCAAACTTATAAGGCTCTTCAAGTTACCGAGTTCAA
JMFF022P23+ GTTCAA
JMFF032M21+ CAGAGATATTGTTGTTGTACAGATCCAAACTTATAAGGCTCTTCAAGTTACCGAGTTCAA
____________________________________________________________
consensus CAGAGATATTGTTGTTGTACAGATCCAAACTTATAAGGCTCTTCAAGTTACCGAGTTCAA
. : . : . : . : . : . :
rJMFF044I11- CAGGAATTGTGCCCTGGATGTTATTTCTGTAAAGCTCCAGGTACTGCAAACGTTCAAGCT
rJMFF032M21- CAGGAATTGNGCCCTGGATGTTATTTCTGTAAAGCTCCAGGTACTGCAAACGTTCAAGCT
rJMSF012C22- CAGGAATTGNGCCCNGGANGTTATTTCNGTAAAGCNCCNGGTACNGCAAACGTTCAAGCT
rJMFF022P23- CAGGAATTGTGCCCTGGATGTTATTTCTGTAAAGCTCCAGGTACTGCAAACGTTCAAGCT
JMFN029A24+ CAGGAATAGTGCCCTGGATGTTATTTCTGTAAAGCTCCAGGTACTGCAAACGTTCAAGCT
JMFF039J02+ CAGGAATTGTGCCCTGGATGTTATTTCTGTAAAGCTCCAGGTACTGCAAACGTTCAAGCT
JMFF044I11+ CAGGAATTGTGCCCTGGATGTTATTTCTGTAAAGCTCCAGGTACTGCAAACGTTCAAGCT
JMFF022P23+ CAGGAATTGTGCCCTGGATGTTATTTCTGTAAAGCTCCAGGTACTGCAAACGTTCAAGCT
JMFF032M21+ CAGGAATTGTGCCCTGGATGTTATTTCTGTAAAGCTCCAGGTACTGCAAACGTTCAAGCT
____________________________________________________________
consensus CAGGAATTGTGCCCTGGATGTTATTTCTGTAAAGCTCCAGGTACTGCAAACGTTCAAGCT
. : . : . : . : . : . :
rJMFF044I11- TCCCAAGATCAGGCACCAGGTGACCAGATAAGTTTGAGTTTCCA
rJMFF032M21- TCCCAANATCAGGCACCAGGNGACCANATAAGTTTGAGTTTCCAAGGTCC
rJMSF012C22- TCCCAANATCAGGCNCCAGGNGACCANATAAGTTTGAGTTTCCAAGGTCCACNCGAGTGA
rJMFF022P23- TCCCAANATCAGGCACCAGGNGACCANATAAGTTTGAGTTTCCAAGGNCCACGCGAGTGA
JMFN029A24+ TCCCAAGATCAGGCACCAGGTGACCAGATAAGTTTGAGTTTCCAAGGTCCACGCGAGTGA
JMFF039J02+ TCCCAAGATCAGGCACCAGGTGACCAGATAAGCTTGAGTTTCCAAGGTCCACGCGAGTGA
JMFF044I11+ TCCCAAGATCAGGCACCAGGTGACCAGATAAGTTTGAGTTTCCAAGGTCCACGCGAGTGA
JMFF022P23+ TCCCAAGATCAGGCACCAGGTGACCAGATAAGTTTGAGTTTCCAAGGTCCACGCGAGTGA
JMFF032M21+ TCCCAAGATCAGGCACCAGGTGACCAGATAAGTTTGAGTTTCCAAGGTCCTCGCGAGTGA
____________________________________________________________
consensus TCCCAAGATCAGGCACCAGGTGACCAGATAAGTTTGAGTTTCCAAGGTCCACGCGAGTGA
. : . : . : . : . : . :
rJMSF012C22- CACGGTTGTCTTTGTCGCAAGTGACGTGAAACCAGGTGCAAGGGTTCA
rJMFF022P23- CACGGTTGTCTTTGTCGCGAGTGACGTGAAACCANGTGCAANGGTTCACCAAATTGGGAT
JMFN029A24+ CACGGTTGTCTTTGTCGCAAGTGACGTGAAACCAGGTGCAAGGGTTCACCAGATTGGGAT
JMFF039J02+ CACGGTTGTCTTTGTCGCAAGTGACGTGAAACCAGGTGCAAGGGTTCACCAGATTGGGAT
JMFF044I11+ CACGGTTGTCTTTGTCGCAAGTGACGTGAAACCAGGTGCAAGGGTTCACCAGATTGGGAT
JMFF022P23+ CACGGTTGTCTTTGTCGCGAGTGACGTGAAACCAGGTGCAAGGGTTCACCAGATTGGGAT
JMFF032M21+ CACGGTTGTCTTTGTCGCAAGTGACGTGAAACCAGGTGCAAGGGTTCACCAGATTGGGAT
____________________________________________________________
consensus CACGGTTGTCTTTGTCGCAAGTGACGTGAAACCAGGTGCAAGGGTTCACCAGATTGGGAT
. : . : . : . : . : . :
rJMFF022P23- CCCAGCTCTGAAGCACGTTGTTGGGGTCCGACAAGCCCCGGCGCAGCGCGTACAGCGCGT
JMFN029A24+ CCCAGCTCTGAAGCACGTTGTTGGGGTCCGACAAGCCCCGGCGCAGCGCGTACAGCGCGT
JMFF039J02+ CCCAGCTCTGAAGCACGTTGTTGGGGTCCGACAAGCCCCGGCGCAGCGCGTACAGCGCGT
JMFF044I11+ CCCAGCTCTGAAGCACGTTGTTGGGGTCCGACAAGCCCCGGCGCAGCGCGTACAGCGCGT
JMFF022P23+ CCCAGCTCTGAAGCACGTTGTTGGGGTCCGACAAGCCCCGGCGCAGCGCGTACAGCGCGT
JMFF032M21+ CCCAGCTCTGAAGCACGTTGTTGGGCTCCGACAAGCCCCGGCGCAGCGCGTACAGCGCGT
____________________________________________________________
consensus CCCAGCTCTGAAGCACGTTGTTGGGGTCCGACAAGCCCCGGCGCAGCGCGTACAGCGCGT
. : . : . : . : . : . :
rJMFF022P23- CCCCTTCGGAATTTGCGCTCACGCCGCCGCACA
JMFN029A24+ CCCCTTCGGAATTTGCGCTCACGCCGCCGCACACAGCACCGGCCAGTGCTACAACTGCAA
JMFF039J02+ CCCCTTCGGAATTTGCGCTCACGCCGCCGCACACAGCACCGGCCAGTGCTACAACTGCAA
JMFF044I11+ CCCCTTCGGAATTTGCGCTCACGCCGCCGCACACAGCACCGGCCAGTGCTACAACTGCAA
JMFF022P23+ CCCCTTCGGAATTTGCGCTCACGCCGCCGCACACAGCACCGGCCAGTGCTACAACTGCAA
JMFF032M21+ CCCCTTCGGAATTTGCGCTCACGCCGCCGCACACAGCACCGGCCAGTGCTACAACTGCAA
JMSF012C22+ CGCCGCCGCACACAGCACCGGCCAGTGCTACAACTGCAA
____________________________________________________________
consensus CCCCTTCGGAATTTGCGCTCACGCCGCCGCACACAGCACCGGCCAGTGCTACAACTGCAA
. : . : . : . : . : . :
JMFN029A24+ CTGCAACTATCAACTTTGCAGCAGCCGCCATGGCGCTTCAATTCCCACCCACCCTAACTC
JMFF039J02+ CTGCAACTATCAACTTTGCAGCAGCCGCCATGGCGCTTCAATTCCCACCCACCCTAACTC
JMFF044I11+ CTGCAACTATCAACTTTGCAGCAGCCGCCATGGCGCTTCAATTCCCACCCACCCTAACTC
JMFF022P23+ CTGCAACTATCAACTTTGCAGCAGCCGCCATGGCGCTTCAATTCCCACCCACCCTAACTC
JMFF032M21+ CTGCAACTATCAACTTTGCAGCAGCCGCCATGGCGCTTCAATTCCCACCCACCCTAACTC
JMFF003G24+ TCAATTCCCACCCACCCTAACTC
JMSF012C22+ CTGCAACTATCAACTTTGCAGCAGCCGCCATGGCGCTTCAATTCCCACCCACCCTAACTC
____________________________________________________________
consensus CTGCAACTATCAACTTTGCAGCAGCCGCCATGGCGCTTCAATTCCCACCCACCCTAACTC
. : . : . : . : . : . :
JMFN029A24+ AATTTCAACAGGCACTACTTGCGTACTAGTACACAAACACAAACAGTTAGTTACTCCCAG
JMFF039J02+ AATTTCAACAGGCACTACTTGCGTACTAGTACACAAACACAAACAGTTAGTTACTCCCAG
JMFF044I11+ AATTTCAACAGGCACTACTTGCGTACTAGTACACAAACACAAACAGTTAGTTACTCCCAG
JMFF022P23+ AATTTCAACAGGCACTACTTGCGTACTAGTACACAAACACAAACAGTTAGTTACTCCCAG
JMFF032M21+ AATTTCAACAGGCACTACTTGCGTACTAGTACACAAACACAAACAGTTAGTTACTCCCAG
JMFF003G24+ AATTTCAACAGGCACTACTTGCGTACTAGTACACAAACACAAACAGTTAGTTACTCCCAG
JMSF012C22+ AATTTCAACAGGCACTACTTGCGTACTAGTACACAAACACAAACAGTTAGTTACTCCCAG
____________________________________________________________
consensus AATTTCAACAGGCACTACTTGCGTACTAGTACACAAACACAAACAGTTAGTTACTCCCAG
. : . : . : . : . : . :
JMFN029A24+ AATGCGAAGAAGAGAGGATCCGCGTCGGAAATGGG
JMFF039J02+ AATGCGAAGAAGAGAGGATC
JMFF044I11+ AATGCGAAGAAGAGAGGATCCGCGTCGGAAATGGGAAATCAGCCAGGGAGTACAA
JMFF022P23+ AATGCGAAGAAGAGAGGATCCGCGTCGGAAATGGGAAATCAGCCAGGGAGTACAAAAG
JMFF032M21+ AATGCGAAGAAGAGAGGATCCGCGTCGGAAATGGGAAATCAGCCAGGGAGTACAAAAG
JMFF003G24+ AATGCGAAGAAGAGAGGATCCGCGTCGGAAATGGGAAATCAGCCAGGGAGTACTAAAG
JMSF012C22+ AATGCGAAGAAGAGAGGATCCGCGTCGGAAATGGGAAATCAGCCAGGGAGTACAAAAGGC
____________________________________________________________
consensus AATGCGAAGAAGAGAGGATCCGCGTCGGAAATGGGAAATCAGCCAGGGAGTACAAAAGGC