Contig 002132:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS001C08Sequence561002132 (5)ref|XP_009587346.1|156PREDICTED: uncharacterized protein LOC104085097 [Nicotiana tomentosiformis]
JMFS013E07Sequence598002132 (5)ref|XP_009587346.1|190PREDICTED: uncharacterized protein LOC104085097 [Nicotiana tomentosiformis]
JMFS158D12Sequence486002132 (5)ref|XP_009587346.1|144PREDICTED: uncharacterized protein LOC104085097 [Nicotiana tomentosiformis]
JMFS166H08Sequence158002132 (5)emb|CDO97824.1|2e-16unnamed protein product [Coffea canephora]
JMSF011B18Sequence232002132 (5)emb|CAN65011.1|1e-11hypothetical protein VITISV_027350 [Vitis vinifera]724020316ref|XP_009605786.1|3e-119PREDICTED: nuclear pore complex protein Nup107, partial [Nicotiana tomentosifor

Alignment

This contig is upended


. : . : . : . : . : . :
JMFS013E07+ GTCCTCCACAATTCTGTGCCTTCCACTAAACCCAAATCTAA
                      ____________________________________________________________
consensus GTCCTCCACAATTCTGTGCCTTCCACTAAACCCAAATCTAA
 
. : . : . : . : . : . :
JMFS013E07+ TTGACTCTGAAACATTGCGGCAAGAATTCTCAAAATGTAATACCAATTCAGGTATAGTCA
JMFS001C08+ AAATGTAATACCAATTCAGGTATAGTCA
                      ____________________________________________________________
consensus TTGACTCTGAAACATTGCGGCAAGAATTCTCAAAATGTAATACCAATTCAGGTATAGTCA
 
. : . : . : . : . : . :
JMFS013E07+ TTAACCCTTTAAGAGCTGAATCCAATAGCGAAGCAAATAAAGAAAAGGTTGTGCCCTCAT
JMFS158D12+ AGAAAAGGTTGTGCCCTCAT
JMFS001C08+ TTAACCCTTTAAGAGCTGAATCCAATAGCGAAGCAAATAAAGAAAAGGTTGTGCCCTCAT
                      ____________________________________________________________
consensus TTAACCCTTTAAGAGCTGAATCCAATAGCGAAGCAAATAAAGAAAAGGTTGTGCCCTCAT
 
. : . : . : . : . : . :
JMFS013E07+ CATCTACCACTGCATCATGCTCCTCCTTGCATGTTTTAAGGGAAATGCTTCCACCTTGGC
JMFS158D12+ CATCTACCACTGCATCATGCTCCTCCTTGCATGTTTTAAGGGAAATGCTTCCACCTTGGC
JMFS001C08+ CATCTACCACTGCATCATGCTCCTCCTTGCATGTTTTAAGGGAAATGCTTCCACCTTGGC
                      ____________________________________________________________
consensus CATCTACCACTGCATCATGCTCCTCCTTGCATGTTTTAAGGGAAATGCTTCCACCTTGGC
 
. : . : . : . : . : . :
JMFS013E07+ GAGTGGCATCGACACCAAAATCTGTCCCGGAAATTACATGGCTCTCGAGAGAAGATCTCC
JMFS158D12+ GAGTGGCATCGACACCAAAATCTGTCCCGGAAATTACATGGCTCTCGAGAGAAGATCTCC
JMFS001C08+ GAGTGGCATCGACACCAAAATCTGTCCCGGAAATTACATGGCTCTCGAGAGAAGATCTCC
                      ____________________________________________________________
consensus GAGTGGCATCGACACCAAAATCTGTCCCGGAAATTACATGGCTCTCGAGAGAAGATCTCC
 
. : . : . : . : . : . :
JMFS013E07+ ATTTTGTGTCATTTTGCATCTTTAGAGGTGTTGTTACATGATCACTATGAAGGCTTTCAA
JMFS158D12+ ATTTTGTGTCATTTTGCATCTTTAGAGGTGTTGTTACATGATCACTATGAAGGCTTTCAA
JMFS001C08+ ATTTTGTGTCATTTTGCATCTTTAGAGGTGTTGTTACATGATCACTATGAAGGCTTTCAA
                      ____________________________________________________________
consensus ATTTTGTGTCATTTTGCATCTTTAGAGGTGTTGTTACATGATCACTATGAAGGCTTTCAA
 
. : . : . : . : . : . :
JMFS166H08- TACTTTCCAGAAAAAGAGCTGAATTTGACCTAACCTCTGCTAACCTAT
JMFS013E07+ ATTCTTGCTTGATACTTTCCAGAAAAAGAGCTGAATTTGACCTAACCTCTGCTAACCTAT
JMFS158D12+ ATTCTTGCTTGATACTTTCCAGAAAAAGAGCTGAATTTGACCTAACCTCTGCTAACCTAT
JMFS001C08+ ATTCTTGCTTGATACTTTCCAGAAAAAGAGCTGAATTTGACCTAACCTCTGCTAACCTAT
                      ____________________________________________________________
consensus ATTCTTGCTTGATACTTTCCAGAAAAAGAGCTGAATTTGACCTAACCTCTGCTAACCTAT
 
. : . : . : . : . : . :
JMFS166H08- CAGCTGATTTTTCTCGGTGCGGAGATAGGCTAGAAGGAGAATGTCGTTTGCCGTATCGAC
JMFS013E07+ CAGCTGATTTTTCTCGGTGCGGAGATAGGCTAGAAGGAGAATGTCGTTTGCCGTATCGAC
JMFS158D12+ CAGCTGATTTTTCTCGGTGCGGACACAGGCTAGAAGGAGAATGTCGTTTGCCGTATCGAC
JMFS001C08+ CAGCTGATTTTTCTCGGTGCGGAGATAGGCTAGAAGGAGAATGTCGTTTGCCGTATCGAC
JMSF011B18+ TTTTCTCGGTGCGGAGATAGGCTAGAAGGAGAATGTCGTTTGCCGTATCGAC
                      ____________________________________________________________
consensus CAGCTGATTTTTCTCGGTGCGGAGATAGGCTAGAAGGAGAATGTCGTTTGCCGTATCGAC
 
. : . : . : . : . : . :
JMFS166H08- GAAAGCGCTGTCTGATACTGAGATCTTCGGGGTCAAAGCTGCTGGGGGAA
JMFS013E07+ GAAAGCGCTGTCTGATACTGAGATCTTCGGGGTCAAAGCTGCTGGGGGAAGTCTCCATAT
JMFS158D12+ GAAAGCGCTGTCTGATACTGAGATCTTCGGGGTCAAAGCTGCTGGGGGAAGTCTCCATAT
JMFS001C08+ GAAAGCGCTGTCTGATACTGAGATCTTCGGGGTCAAAGCTGCTGGGGGAAGTCTCCATAT
JMSF011B18+ GAAAGCGCTGTCTGATACTGAGATCTTCGGGGTCAAAGCTGCTGGGGGAAGTCTCCATAT
                      ____________________________________________________________
consensus GAAAGCGCTGTCTGATACTGAGATCTTCGGGGTCAAAGCTGCTGGGGGAAGTCTCCATAT
 
. : . : . : . : . : . :
JMFS013E07+ CCACCTCCATTGTGGTAAACACCGAAATTTGATGGTCCCAAATTCGTGAAAAATCTCTGC
JMFS158D12+ CCACCTCCATTGTGGTAAACACCGAAATTTGATGGTCCCAAATTCGTGAAAAATCTCCGC
JMFS001C08+ CCACCTCCATTGTGGTAAACACCGAAATTTGATGGTCCCAAATTCGTGAAAAATCTCTGC
JMSF011B18+ CCACCTCCATTGTGGTAAACACCGAAATTTGATGGTCCCAAATTCGTGAAAAATCTCTGC
                      ____________________________________________________________
consensus CCACCTCCATTGTGGTAAACACCGAAATTTGATGGTCCCAAATTCGTGAAAAATCTCTGC
 
. : . : . : . : . : . :
JMFS013E07+ AACGGTGGTACTTGAAG
JMFS158D12+ ACCGGTGGTACTTGAAGTAAAGCTTAAACCCTAGAGCTCTAAGCGC
JMFS001C08+ AACGGTGGTACTTGAAGTAAAGCTTAAACCCTAGAGCTCTAAGCGC
JMSF011B18+ AACGGTGGTACTTGAAGTAAAGCTTAAACCCTAGAGCTCTAAGCGCGGGAAGGGTACTCC
                      ____________________________________________________________
consensus AACGGTGGTACTTGAAGTAAAGCTTAAACCCTAGAGCTCTAAGCGCGGGAAGGGTACTCC