Contig 002131:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF011B08Sequence226002131 (2)745002858 (2)ref|XP_009793676.1|2e-47PREDICTED: probable polygalacturonase [Nicotiana sylvestris]
JMSF024C05Sequence690002131 (2)emb|CDP17099.1|3e-79unnamed protein product [Coffea canephora]810002858 (2)ref|XP_009793676.1|1e-61PREDICTED: probable polygalacturonase [Nicotiana sylvestris]

Alignment

This contig is upended


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JMSF024C05+ CTTCACTAGAACTAACAAATTCAATTAGATGAGGTCGACTGTA
                      ____________________________________________________________
consensus CTTCACTAGAACTAACAAATTCAATTAGATGAGGTCGACTGTA
 
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JMSF024C05+ ATTCAATGCATGGGCATCGAATTGTTCCCCCAGACAGAACCCTGGCCATCAATAGTTCCA
                      ____________________________________________________________
consensus ATTCAATGCATGGGCATCGAATTGTTCCCCCAGACAGAACCCTGGCCATCAATAGTTCCA
 
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JMSF024C05+ TTATTGCCTGTTATTGCAACATCAACTAAATTATTTCCCGTGATCAAGCTGCGATATCTT
                      ____________________________________________________________
consensus TTATTGCCTGTTATTGCAACATCAACTAAATTATTTCCCGTGATCAAGCTGCGATATCTT
 
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JMSF024C05+ TGACCTGGCACATCAATACCTCGCCCATAAGATGGTAAGGGATCAACTACATCCCAATGA
                      ____________________________________________________________
consensus TGACCTGGCACATCAATACCTCGCCCATAAGATGGTAAGGGATCAACTACATCCCAATGA
 
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JMSF024C05+ GTGTAATCCTCGGATCCTAGAATAATGGCATTTTTTTCCAGGAAGAGTGTAAGGTGACTG
                      ____________________________________________________________
consensus GTGTAATCCTCGGATCCTAGAATAATGGCATTTTTTTCCAGGAAGAGTGTAAGGTGACTG
 
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JMSF024C05+ GTAAGGTTGATGCTACCAGTCAGCCACCTGCCAGCTGGAACATAGAGTTGTGCGCCCCCC
                      ____________________________________________________________
consensus GTAAGGTTGATGCTACCAGTCAGCCACCTGCCAGCTGGAACATAGAGTTGTGCGCCCCCC
 
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JMSF024C05+ TTGTCAGCAAATGACTTAAGATAAAATACCGCATTCTGAAATGCAACAGTATTCGATGTT
                      ____________________________________________________________
consensus TTGTCAGCAAATGACTTAAGATAAAATACCGCATTCTGAAATGCAACAGTATTCGATGTT
 
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JMSF024C05+ TTCCCGTCCCCCACAGCACCAAAGTCCAAAACCGATGCTCTGTGAGGCCTGGGTTTCACC
                      ____________________________________________________________
consensus TTCCCGTCCCCCACAGCACCAAAGTCCAAAACCGATGCTCTGTGAGGCCTGGGTTTCACC
 
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JMSF024C05+ GGTTTACTGAGAGTGCATTCTCCCTCGATTTGAGCTTCAGTATGCTCTACACTGTCATTC
JMSF011B08+ GAGTGCATTCTCCCTCGATTTGAGCTTCAGTATGCTCTACACTGTCATTC
                      ____________________________________________________________
consensus GGTTTACTGAGAGTGCATTCTCCCTCGATTTGAGCTTCAGTATGCTCTACACTGTCATTC
 
. : . : . : . : . : . :
JMSF024C05+ AAAACCAATAGCAAAAGGAGAACTACTTACTAGCCCCTTCATGGGTTTCCTGTCTTTCTC
JMSF011B08+ AAAACCAATAGCAAAAGGAGAAC----TACTAGCCCCTTCATGGGTTTCCTGTCTTTCTC
                      ____________________________________________________________
consensus AAAACCAATAGCAAAAGGAGAACTACTTACTAGCCCCTTCATGGGTTTCCTGTCTTTCTC
 
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JMSF024C05+ CCGCATTGTGGTTAGAGTGAAAAGGCAGGACCACAAGTCCACCACACCACCCACCCTCTG
JMSF011B08+ CCGCATTGTGGTTAGAGTGAAAAGGCAGGACCACAAGTCCACCACACCACCCACCCTCTG
                      ____________________________________________________________
consensus CCGCATTGTGGTTAGAGTGAAAAGGCAGGACCACAAGTCCACCACACCACCCACCCTCTG
 
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JMSF024C05+ ATAGGCTTGAGCAGAGTGAAGAAGACGCAGAGAGGCGTATGGCAGT
JMSF011B08+ ATAGGCTTGAGCAGAGTGAAGAAGACGCAGAGAGGCGTATGGCAGTGAAGTGTGAATATC
                      ____________________________________________________________
consensus ATAGGCTTGAGCAGAGTGAAGAAGACGCAGAGAGGCGTATGGCAGTGAAGTGTGAATATC