Contig 002130:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF012E08Sequence498002130 (6)ref|XP_004238153.1|7e-77PREDICTED: serine/threonine-protein kinase tricorner [Solanum lycopersicum]777002654 (6)ref|XP_006354880.1|5e-134PREDICTED: serine/threonine-protein kinase tricorner-like [Solanum tuberosum]
JMFF033P23Sequence332002130 (6)ref|XP_006354880.1|5e-35PREDICTED: serine/threonine-protein kinase tricorner-like [Solanum tuberosum]683002654 (6)ref|XP_006354880.1|2e-82PREDICTED: serine/threonine-protein kinase tricorner-like [Solanum tuberosum]
JMFF040D14Sequence532002130 (6)ref|XP_004238153.1|3e-83PREDICTED: serine/threonine-protein kinase tricorner [Solanum lycopersicum]770002654 (6)ref|XP_006354880.1|2e-98PREDICTED: serine/threonine-protein kinase tricorner-like [Solanum tuberosum]
JMSF011A22Sequence311002130 (6)ref|XP_004238153.1|8e-08PREDICTED: serine/threonine-protein kinase tricorner [Solanum lycopersicum]728002654 (6)ref|XP_006354880.1|1e-90PREDICTED: serine/threonine-protein kinase tricorner-like [Solanum tuberosum]
JMSF017K03Sequence552002130 (6)ref|XP_004238153.1|1e-76PREDICTED: serine/threonine-protein kinase tricorner [Solanum lycopersicum]746002654 (6)ref|XP_006354880.1|3e-123PREDICTED: serine/threonine-protein kinase tricorner-like [Solanum tuberosum]
JMSF046J15Sequence806002130 (6)ref|XP_004238153.1|6e-122PREDICTED: serine/threonine-protein kinase tricorner [Solanum lycopersicum]787002654 (6)ref|XP_006354880.1|5e-94PREDICTED: serine/threonine-protein kinase tricorner-like [Solanum tuberosum]

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF046J15+ TCATCAACAGTGTCATAATGTCACCG
                      ____________________________________________________________
consensus TCATCAACAGTGTCATAATGTCACCG
 
. : . : . : . : . : . :
JMSF046J15+ CCAGGTAAATACTCCATGATGAGGTATAAGAATTCTGAATCCTGGAAAGAATAGAAGAGT
                      ____________________________________________________________
consensus CCAGGTAAATACTCCATGATGAGGTATAAGAATTCTGAATCCTGGAAAGAATAGAAGAGT
 
. : . : . : . : . : . :
JMSF046J15+ TTCACAATGCAATGACTGGCAACCTCCACAAGCAAATTCCTTTCTGATCGAACATGCTCA
                      ____________________________________________________________
consensus TTCACAATGCAATGACTGGCAACCTCCACAAGCAAATTCCTTTCTGATCGAACATGCTCA
 
. : . : . : . : . : . :
JMSF017K03+ GGCAAAAATTTCTCCA
JMFF040D14+ CTAAGCATTTCTGACTTCTTCAATTTCTTCATGGCAAAAATTTCTCCA
JMFF012E08+ GGCAAAAATTTCTCCA
JMSF046J15+ ACCTGTCCACGGCTAAGCATTTCTGACTTCTTCAATTTCTTCATGGCAAAAATTTCTCCA
                      ____________________________________________________________
consensus ACCTGTCCACGGCTAAGCATTTCTGACTTCTTCAATTTCTTCATGGCAAAAATTTCTCCA
 
. : . : . : . : . : . :
JMSF017K03+ GTACTCTTAAAACGACACAGCCTCACCTCGCCAAAGGCACCTTTACCAATGACAGTTAAC
JMFF040D14+ GTACTCTTAAAACGACACAGCCTCACCTCGCCAAAGGCACCTTTACCAATGACAGTTAAC
JMFF012E08+ GTACTCTTAAAACGACACAGCCTCACCTCGCCAAAGGCACCTTTACCAATGACAGTTAAC
JMSF046J15+ GTACTCTTAAAACGACACAGCCTCACCTCGCCAAAGGCACCTTTACCAATGACAGTTAAC
                      ____________________________________________________________
consensus GTACTCTTAAAACGACACAGCCTCACCTCGCCAAAGGCACCTTTACCAATGACAGTTAAC
 
. : . : . : . : . : . :
JMSF017K03+ TGCTCAAAGTCATCTATCCCAACTTTATGCCTCTGCAACCTCATATACTCGGTCTCCCTC
JMFF040D14+ TGCTCAAAGTCATCTATCCCAACTTTATGCCTCTGCAACCTCATATACTCGGTCTCCCTC
JMFF012E08+ TGCTCAAAGTCATCTATCCCAACTTTATGCCTCTGCAACCTCATATACTCGGTCTCCCTC
JMSF046J15+ TGCTCAAAGTCATCTATCCCAACTTTATGCCTCTGCAACCTCATATACTCGGTCTCCCTC
                      ____________________________________________________________
consensus TGCTCAAAGTCATCTATCCCAACTTTATGCCTCTGCAACCTCATATACTCGGTCTCCCTC
 
. : . : . : . : . : . :
JMSF017K03+ TTCGCCAAATTCTTCAGCATCTTCTCCTGCTCCTCGTCCGGTATCTGCGCTTCCTGCGCT
JMFF040D14+ TTCGCCAAATTCTTCAGCATCTTCTCCTGCTCCTCGTCCGGTATCTGCGCTTCCTGCGCT
JMFF012E08+ TTCGCCAAATTCTTCAGCATCTTCTCCTGCTCCTCGTCCGGTATCTGCGCTTCCTGCGCT
JMFF033P23+ TCGTCCGGTATCTGCGCTTCCTGCGCT
JMSF046J15+ TTCGCCAAATTCTTCAGCATCTTCTCCTGCTCCTCGTCCGGTATCTGCGCTTCCTGCGCT
                      ____________________________________________________________
consensus TTCGCCAAATTCTTCAGCATCTTCTCCTGCTCCTCGTCCGGTATCTGCGCTTCCTGCGCT
 
. : . : . : . : . : . :
JMSF017K03+ CTCCTCTGCAACGTCCTACGCCTTTCCATGCGATCCTGCAGCCCCTGGAGATAGTTCTTA
JMFF040D14+ CTCCTCTGCAACGTCCTACGCCTTTCCATGCGATCCTGCAGCCCCTGGAGATAGTTCTTA
JMFF012E08+ CTCCTCTGCAACGTCCTACGCCTTTCCATGCGATCCTGCAGCCCCTGGAGATAGTTCTTA
JMFF033P23+ CTCCTCTGCAACGTCCTACGCCTTTCCATGCGATCCTGCAGCCCCTGGAGATAGTTCTTA
JMSF046J15+ CTCCTCTGCAACGTCCTACGCCTTTCCATGCGATCCTGCAGCCCCTGGAGATAGTTCTTA
                      ____________________________________________________________
consensus CTCCTCTGCAACGTCCTACGCCTTTCCATGCGATCCTGCAGCCCCTGGAGATAGTTCTTA
 
. : . : . : . : . : . :
JMSF017K03+ TAGTGATTCTCGATGAACTGCTTGGCGGCAGCTGCTTTCTGGCGGGTAACCGGCGAGGAA
JMFF040D14+ TAGTGATTCTCGATGAACTGCTTGGCGGCAGCTGCTTTCTGGCGGGTAACCGGCGAGGAA
JMFF012E08+ TAGTGATTCTCGATGAACTGCTTGGCGGCAGCTGCTTTCTGGCGGGTAACCGGCGAGGAA
JMFF033P23+ TAGTGATTCTCGATGAACTGCTTGGCGGCAGCTGCTTTCTGGCGGGTAACCGGCGAGGAA
JMSF046J15+ TAGTGATTCTCGATGAACTGCTTGGCGGCAGCTGCTTTCTGGCGGGTAACCGGCGAGGAA
JMSF011A22+ CCGGCGAGGAA
                      ____________________________________________________________
consensus TAGTGATTCTCGATGAACTGCTTGGCGGCAGCTGCTTTCTGGCGGGTAACCGGCGAGGAA
 
. : . : . : . : . : . :
JMSF017K03+ ACGGAGAAATCGGGATCGAGATTGTTGAAGACCCGCTCGGGAGTCATGTTGATGGCTCCC
JMFF040D14+ ACGGAGAAATCGGGATCGAGATTGTTGAAGACCCGCTCGGGAGTCATGTTGATGGCTCCC
JMFF012E08+ ACGGAGAAATCGGGATCGAGATTGTTGAAGACCCGCTCGGGAGTCATGTTGATGGCTCCC
JMFF033P23+ ACGGAGAAATCGGGATCGAGATTGTTGAAGACCCGCTCGGGAGTCATGTTGATGGCTCCC
JMSF046J15+ ACGGAGAAATCGGGATCGAGATTGTTGAAGACCCGCTCGGGAGTCATGTTGATGGCTCCC
JMSF011A22+ ACGGAGAAATCGGGATCGAGATTGTTGAAGACCCGCTCGGGAGTCATGTTGATGGCTCCC
                      ____________________________________________________________
consensus ACGGAGAAATCGGGATCGAGATTGTTGAAGACCCGCTCGGGAGTCATGTTGATGGCTCCC
 
. : . : . : . : . : . :
JMSF017K03+ AATCTCACCGTGCCATCTCCGCCGCCCTCCATTGAGAGTTACGCTATCAGATCCAAACCG
JMFF040D14+ AATCTCACCGTGCCATCTCCGCCGCCCTCCATTGAGAGTTACGCTATCAGATCCAAACCG
JMFF012E08+ AATCTCACCGTGCCATCTCCGCCGCCCTCCATTGAGAGTTACGCTATCAGATCCAAACCG
JMFF033P23+ AATCTCACCGTGCCATCTCCGCCGCCCTCCATTGAGAGTTACGCTATCAGATCCAAACCG
JMSF046J15+ AATCTCACCGTGCCATCTCCGCCGCCCTCCATTGAGAGTTACGCTATCAGATCCAAACCG
JMSF011A22+ AATCTCACCGTGCCATCTCCGCCGCCCTCCATTGAGAGTTACGCTATCAGATCCAAACCG
                      ____________________________________________________________
consensus AATCTCACCGTGCCATCTCCGCCGCCCTCCATTGAGAGTTACGCTATCAGATCCAAACCG
 
. : . : . : . : . : . :
JMSF017K03+ GAGAAGCTTCAAGCCTCGAATCTGACCTGAGAAGACGAAGAAGTGTCGGAGTCAACAGGT
JMFF040D14+ GAGAAGCTTCAAGCCTCGAATCTGACCTGAGAAGACGAAGAAGTGTCGGAGTCAACAGGT
JMFF012E08+ GAGAAGCTTCAAGCCTCGAATCTGACCTGAGAAGACGAAGAAGTGTCGGAGTCAACAGGT
JMFF033P23+ GAGAAGCTTCAAGCCTCGAATCTGACCTGAGAAGANGAAGAAGTGTCGGAGTCAACAGGT
JMSF046J15+ GAGAAGCTTCAAGCCTCGAATCTGACCTGAGAAGACGAAGAAGTGTCGGAGTCAACAGGT
JMSF011A22+ GAGAAGCTTCAAGCCTCGAATCTGACCTGAGAAGACGAAGAAGTGTCGGAGTCAACAGGT
                      ____________________________________________________________
consensus GAGAAGCTTCAAGCCTCGAATCTGACCTGAGAAGACGAAGAAGTGTCGGAGTCAACAGGT
 
. : . : . : . : . : . :
JMSF017K03+ GAGTTCGGTGTGAGAGCAGCGATGAGAGTTTTATTGCAGTTGTTTGGTAGGGTGT
JMFF040D14+ GAGT
JMSF046J15+ GAGTTCGGTGTGAGAGCAGCGATGGGAGTTTTATTGCAGTTGTTTGGTAGGGTGTGAACT
JMSF011A22+ GAGTTCGGTGTGAGAGCAGCGATGAGAGTTTTATTGCAGTTGTTTGGTAGGGTGTGAACT
                      ____________________________________________________________
consensus GAGTTCGGTGTGAGAGCAGCGATGAGAGTTTTATTGCAGTTGTTTGGTAGGGTGTGAACT
 
. : . : . : . : . : . :
JMSF046J15+ GGCATAGATCGGGGAAAGGGGAGAGGGAAGGGAGGGGGGTGGTTAGCGGGAGCTTAGC
JMSF011A22+ GGCATAGATCGGGGAAAGGGGAGAGGGAAGGGAGGGGGGTGGTTAGCGGGAGCTTAGCGC
                      ____________________________________________________________
consensus GGCATAGATCGGGGAAAGGGGAGAGGGAAGGGAGGGGGGTGGTTAGCGGGAGCTTAGCGC