clone | 5'-sequence | 3'-sequence | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
JMFF012E08 | Sequence | 498 | 002130 (6) | ref|XP_004238153.1| | 7e-77 | PREDICTED: serine/threonine-protein kinase tricorner [Solanum lycopersicum] | 777 | 002654 (6) | ref|XP_006354880.1| | 5e-134 | PREDICTED: serine/threonine-protein kinase tricorner-like [Solanum tuberosum] |
JMFF033P23 | Sequence | 332 | 002130 (6) | ref|XP_006354880.1| | 5e-35 | PREDICTED: serine/threonine-protein kinase tricorner-like [Solanum tuberosum] | 683 | 002654 (6) | ref|XP_006354880.1| | 2e-82 | PREDICTED: serine/threonine-protein kinase tricorner-like [Solanum tuberosum] |
JMFF040D14 | Sequence | 532 | 002130 (6) | ref|XP_004238153.1| | 3e-83 | PREDICTED: serine/threonine-protein kinase tricorner [Solanum lycopersicum] | 770 | 002654 (6) | ref|XP_006354880.1| | 2e-98 | PREDICTED: serine/threonine-protein kinase tricorner-like [Solanum tuberosum] |
JMSF011A22 | Sequence | 311 | 002130 (6) | ref|XP_004238153.1| | 8e-08 | PREDICTED: serine/threonine-protein kinase tricorner [Solanum lycopersicum] | 728 | 002654 (6) | ref|XP_006354880.1| | 1e-90 | PREDICTED: serine/threonine-protein kinase tricorner-like [Solanum tuberosum] |
JMSF017K03 | Sequence | 552 | 002130 (6) | ref|XP_004238153.1| | 1e-76 | PREDICTED: serine/threonine-protein kinase tricorner [Solanum lycopersicum] | 746 | 002654 (6) | ref|XP_006354880.1| | 3e-123 | PREDICTED: serine/threonine-protein kinase tricorner-like [Solanum tuberosum] |
JMSF046J15 | Sequence | 806 | 002130 (6) | ref|XP_004238153.1| | 6e-122 | PREDICTED: serine/threonine-protein kinase tricorner [Solanum lycopersicum] | 787 | 002654 (6) | ref|XP_006354880.1| | 5e-94 | PREDICTED: serine/threonine-protein kinase tricorner-like [Solanum tuberosum] |
This contig is upended
. : . : . : . : . : . :
JMSF046J15+ TCATCAACAGTGTCATAATGTCACCG
____________________________________________________________
consensus TCATCAACAGTGTCATAATGTCACCG
. : . : . : . : . : . :
JMSF046J15+ CCAGGTAAATACTCCATGATGAGGTATAAGAATTCTGAATCCTGGAAAGAATAGAAGAGT
____________________________________________________________
consensus CCAGGTAAATACTCCATGATGAGGTATAAGAATTCTGAATCCTGGAAAGAATAGAAGAGT
. : . : . : . : . : . :
JMSF046J15+ TTCACAATGCAATGACTGGCAACCTCCACAAGCAAATTCCTTTCTGATCGAACATGCTCA
____________________________________________________________
consensus TTCACAATGCAATGACTGGCAACCTCCACAAGCAAATTCCTTTCTGATCGAACATGCTCA
. : . : . : . : . : . :
JMSF017K03+ GGCAAAAATTTCTCCA
JMFF040D14+ CTAAGCATTTCTGACTTCTTCAATTTCTTCATGGCAAAAATTTCTCCA
JMFF012E08+ GGCAAAAATTTCTCCA
JMSF046J15+ ACCTGTCCACGGCTAAGCATTTCTGACTTCTTCAATTTCTTCATGGCAAAAATTTCTCCA
____________________________________________________________
consensus ACCTGTCCACGGCTAAGCATTTCTGACTTCTTCAATTTCTTCATGGCAAAAATTTCTCCA
. : . : . : . : . : . :
JMSF017K03+ GTACTCTTAAAACGACACAGCCTCACCTCGCCAAAGGCACCTTTACCAATGACAGTTAAC
JMFF040D14+ GTACTCTTAAAACGACACAGCCTCACCTCGCCAAAGGCACCTTTACCAATGACAGTTAAC
JMFF012E08+ GTACTCTTAAAACGACACAGCCTCACCTCGCCAAAGGCACCTTTACCAATGACAGTTAAC
JMSF046J15+ GTACTCTTAAAACGACACAGCCTCACCTCGCCAAAGGCACCTTTACCAATGACAGTTAAC
____________________________________________________________
consensus GTACTCTTAAAACGACACAGCCTCACCTCGCCAAAGGCACCTTTACCAATGACAGTTAAC
. : . : . : . : . : . :
JMSF017K03+ TGCTCAAAGTCATCTATCCCAACTTTATGCCTCTGCAACCTCATATACTCGGTCTCCCTC
JMFF040D14+ TGCTCAAAGTCATCTATCCCAACTTTATGCCTCTGCAACCTCATATACTCGGTCTCCCTC
JMFF012E08+ TGCTCAAAGTCATCTATCCCAACTTTATGCCTCTGCAACCTCATATACTCGGTCTCCCTC
JMSF046J15+ TGCTCAAAGTCATCTATCCCAACTTTATGCCTCTGCAACCTCATATACTCGGTCTCCCTC
____________________________________________________________
consensus TGCTCAAAGTCATCTATCCCAACTTTATGCCTCTGCAACCTCATATACTCGGTCTCCCTC
. : . : . : . : . : . :
JMSF017K03+ TTCGCCAAATTCTTCAGCATCTTCTCCTGCTCCTCGTCCGGTATCTGCGCTTCCTGCGCT
JMFF040D14+ TTCGCCAAATTCTTCAGCATCTTCTCCTGCTCCTCGTCCGGTATCTGCGCTTCCTGCGCT
JMFF012E08+ TTCGCCAAATTCTTCAGCATCTTCTCCTGCTCCTCGTCCGGTATCTGCGCTTCCTGCGCT
JMFF033P23+ TCGTCCGGTATCTGCGCTTCCTGCGCT
JMSF046J15+ TTCGCCAAATTCTTCAGCATCTTCTCCTGCTCCTCGTCCGGTATCTGCGCTTCCTGCGCT
____________________________________________________________
consensus TTCGCCAAATTCTTCAGCATCTTCTCCTGCTCCTCGTCCGGTATCTGCGCTTCCTGCGCT
. : . : . : . : . : . :
JMSF017K03+ CTCCTCTGCAACGTCCTACGCCTTTCCATGCGATCCTGCAGCCCCTGGAGATAGTTCTTA
JMFF040D14+ CTCCTCTGCAACGTCCTACGCCTTTCCATGCGATCCTGCAGCCCCTGGAGATAGTTCTTA
JMFF012E08+ CTCCTCTGCAACGTCCTACGCCTTTCCATGCGATCCTGCAGCCCCTGGAGATAGTTCTTA
JMFF033P23+ CTCCTCTGCAACGTCCTACGCCTTTCCATGCGATCCTGCAGCCCCTGGAGATAGTTCTTA
JMSF046J15+ CTCCTCTGCAACGTCCTACGCCTTTCCATGCGATCCTGCAGCCCCTGGAGATAGTTCTTA
____________________________________________________________
consensus CTCCTCTGCAACGTCCTACGCCTTTCCATGCGATCCTGCAGCCCCTGGAGATAGTTCTTA
. : . : . : . : . : . :
JMSF017K03+ TAGTGATTCTCGATGAACTGCTTGGCGGCAGCTGCTTTCTGGCGGGTAACCGGCGAGGAA
JMFF040D14+ TAGTGATTCTCGATGAACTGCTTGGCGGCAGCTGCTTTCTGGCGGGTAACCGGCGAGGAA
JMFF012E08+ TAGTGATTCTCGATGAACTGCTTGGCGGCAGCTGCTTTCTGGCGGGTAACCGGCGAGGAA
JMFF033P23+ TAGTGATTCTCGATGAACTGCTTGGCGGCAGCTGCTTTCTGGCGGGTAACCGGCGAGGAA
JMSF046J15+ TAGTGATTCTCGATGAACTGCTTGGCGGCAGCTGCTTTCTGGCGGGTAACCGGCGAGGAA
JMSF011A22+ CCGGCGAGGAA
____________________________________________________________
consensus TAGTGATTCTCGATGAACTGCTTGGCGGCAGCTGCTTTCTGGCGGGTAACCGGCGAGGAA
. : . : . : . : . : . :
JMSF017K03+ ACGGAGAAATCGGGATCGAGATTGTTGAAGACCCGCTCGGGAGTCATGTTGATGGCTCCC
JMFF040D14+ ACGGAGAAATCGGGATCGAGATTGTTGAAGACCCGCTCGGGAGTCATGTTGATGGCTCCC
JMFF012E08+ ACGGAGAAATCGGGATCGAGATTGTTGAAGACCCGCTCGGGAGTCATGTTGATGGCTCCC
JMFF033P23+ ACGGAGAAATCGGGATCGAGATTGTTGAAGACCCGCTCGGGAGTCATGTTGATGGCTCCC
JMSF046J15+ ACGGAGAAATCGGGATCGAGATTGTTGAAGACCCGCTCGGGAGTCATGTTGATGGCTCCC
JMSF011A22+ ACGGAGAAATCGGGATCGAGATTGTTGAAGACCCGCTCGGGAGTCATGTTGATGGCTCCC
____________________________________________________________
consensus ACGGAGAAATCGGGATCGAGATTGTTGAAGACCCGCTCGGGAGTCATGTTGATGGCTCCC
. : . : . : . : . : . :
JMSF017K03+ AATCTCACCGTGCCATCTCCGCCGCCCTCCATTGAGAGTTACGCTATCAGATCCAAACCG
JMFF040D14+ AATCTCACCGTGCCATCTCCGCCGCCCTCCATTGAGAGTTACGCTATCAGATCCAAACCG
JMFF012E08+ AATCTCACCGTGCCATCTCCGCCGCCCTCCATTGAGAGTTACGCTATCAGATCCAAACCG
JMFF033P23+ AATCTCACCGTGCCATCTCCGCCGCCCTCCATTGAGAGTTACGCTATCAGATCCAAACCG
JMSF046J15+ AATCTCACCGTGCCATCTCCGCCGCCCTCCATTGAGAGTTACGCTATCAGATCCAAACCG
JMSF011A22+ AATCTCACCGTGCCATCTCCGCCGCCCTCCATTGAGAGTTACGCTATCAGATCCAAACCG
____________________________________________________________
consensus AATCTCACCGTGCCATCTCCGCCGCCCTCCATTGAGAGTTACGCTATCAGATCCAAACCG
. : . : . : . : . : . :
JMSF017K03+ GAGAAGCTTCAAGCCTCGAATCTGACCTGAGAAGACGAAGAAGTGTCGGAGTCAACAGGT
JMFF040D14+ GAGAAGCTTCAAGCCTCGAATCTGACCTGAGAAGACGAAGAAGTGTCGGAGTCAACAGGT
JMFF012E08+ GAGAAGCTTCAAGCCTCGAATCTGACCTGAGAAGACGAAGAAGTGTCGGAGTCAACAGGT
JMFF033P23+ GAGAAGCTTCAAGCCTCGAATCTGACCTGAGAAGANGAAGAAGTGTCGGAGTCAACAGGT
JMSF046J15+ GAGAAGCTTCAAGCCTCGAATCTGACCTGAGAAGACGAAGAAGTGTCGGAGTCAACAGGT
JMSF011A22+ GAGAAGCTTCAAGCCTCGAATCTGACCTGAGAAGACGAAGAAGTGTCGGAGTCAACAGGT
____________________________________________________________
consensus GAGAAGCTTCAAGCCTCGAATCTGACCTGAGAAGACGAAGAAGTGTCGGAGTCAACAGGT
. : . : . : . : . : . :
JMSF017K03+ GAGTTCGGTGTGAGAGCAGCGATGAGAGTTTTATTGCAGTTGTTTGGTAGGGTGT
JMFF040D14+ GAGT
JMSF046J15+ GAGTTCGGTGTGAGAGCAGCGATGGGAGTTTTATTGCAGTTGTTTGGTAGGGTGTGAACT
JMSF011A22+ GAGTTCGGTGTGAGAGCAGCGATGAGAGTTTTATTGCAGTTGTTTGGTAGGGTGTGAACT
____________________________________________________________
consensus GAGTTCGGTGTGAGAGCAGCGATGAGAGTTTTATTGCAGTTGTTTGGTAGGGTGTGAACT
. : . : . : . : . : . :
JMSF046J15+ GGCATAGATCGGGGAAAGGGGAGAGGGAAGGGAGGGGGGTGGTTAGCGGGAGCTTAGC
JMSF011A22+ GGCATAGATCGGGGAAAGGGGAGAGGGAAGGGAGGGGGGTGGTTAGCGGGAGCTTAGCGC
____________________________________________________________
consensus GGCATAGATCGGGGAAAGGGGAGAGGGAAGGGAGGGGGGTGGTTAGCGGGAGCTTAGCGC