Contig 002119:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF012K21Sequence453002119 (7)ref|XP_006434240.1|2e-70hypothetical protein CICLE_v10001976mg [Citrus clementina] gb|ESR47480.1| hypoth221014047 (5)
JMFF036J19Sequence451002119 (7)ref|XP_006434240.1|6e-74hypothetical protein CICLE_v10001976mg [Citrus clementina] gb|ESR47480.1| hypoth
JMSF005K15Sequence342002119 (7)gb|AAM34773.1|AF509873_14e-43nam-like protein 10 [Petunia x hybrida]
JMSF009M05Sequence388002119 (7)gb|AAM34773.1|AF509873_13e-55nam-like protein 10 [Petunia x hybrida]182014047 (5)
JMSF018F02Sequence274002119 (7)ref|XP_003602038.1|2e-26NAC domain protein [Medicago truncatula] gb|AES72289.1| NAC-like transcription f
JMSF037N19Sequence604002119 (7)ref|XP_006434240.1|8e-107hypothetical protein CICLE_v10001976mg [Citrus clementina] gb|ESR47480.1| hypoth289014047 (5)
JMSF038N19Sequence505002119 (7)ref|XP_006434240.1|2e-86hypothetical protein CICLE_v10001976mg [Citrus clementina] gb|ESR47480.1| hypoth444014047 (5)

Alignment

This contig is upended


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JMSF037N19+                                                                  CCTTA
                      ____________________________________________________________
consensus                                                                    CCTTA
 
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JMSF037N19+           TCAAGCTCACCCTTCTTGTTGTATATCCGGCATAAAACCCAGTCATCCAGCCGGAGGCTG
                      ____________________________________________________________
consensus             TCAAGCTCACCCTTCTTGTTGTATATCCGGCATAAAACCCAGTCATCCAGCCGGAGGCTG
 
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JMSF038N19+                    TTACGAGCGGACCGGTCAACGTCGGCGAGCCGGTACTCATGCATGATNCAA
JMSF037N19+           TTGCTCTTCTTACGAGCGGACCGGTCAACGTCGGCGAGCCGGTACTCATGCATGATCCAA
                      ____________________________________________________________
consensus             TTGCTCTTCTTACGAGCGGACCGGTCAACGTCGGCGAGCCGGTACTCATGCATGATCCAA
 
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JMSF038N19+           TTCGTNTTNTNTCCCTTNGGCGCCNNGCCGGAGTAAAACACCAGCGCCTTCTTGATCCCC
JMFF012K21+                                         GAGTAAAACACCAGCGCCTTCTTGATCCCC
JMFF036J19+                                         GAGTAAAACACCAGCGCCTTCTTGATCCCC
JMSF037N19+           TTCGTCTTCTCTCCCTTCGGCGCCTTGCCGGAGTAAAACACCAGCGCCTTCTTGATCCCC
                      ____________________________________________________________
consensus             TTCGTCTTCTCTCCCTTCGGCGCCTTGCCGGAGTAAAACACCAGCGCCTTCTTGATCCCC
 
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JMSF038N19+           ACTGGTTTCGGCTGTCCGATCGGCTTATCGGCTCCGGTAGCCTTCCAGTAACCTCTCCCC
JMFF012K21+           ACTGGTTTCGGCTGTCCGATCGGCTTATCGGCTCCGGTAGCCTTCCAGTAACCTCTCCCC
JMFF036J19+           ACTGGTTTCGGCTGTCCGATCGGCTTATCGGCTCCGGTAGCCTTCCAGTAACCTCTCCCC
JMSF037N19+           ACTGGTTTCGGCTGTCCGATCGGCTTATCGGCTCCGGTAGCCTTCCAGTAACCTCTCCCC
JMSF009M05+                                           TCCGGTAGCCTTCCAGTAACCTNTCCCC
                      ____________________________________________________________
consensus             ACTGGTTTCGGCTGTCCGATCGGCTTATCGGCTCCGGTAGCCTTCCAGTAACCTCTCCCC
 
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JMSF038N19+           GCCGCCCGGTTCGGCCTCGAACCGTTCGGATACTTCCGGTCTCGCGGCGAGAAGAAGTAC
JMFF012K21+           GCCGCCCGGTTCGGCCTCGAACCGTTCGGATACTTCCGGTCTCGCGGCGAGAAGAAGTAC
JMFF036J19+           GCCGCCCGGTTCGGCCTCGAACCGTTCGGATACTTCCGGTCTCGCGGCGAGAAGAAGTAC
JMSF005K15+                            CGAACCGTTCGGATACTTCCGGTCTCGCGGCGAGAAGAAGTAC
JMSF037N19+           GCCGCCCGGTTCGGCCTCGAACCGTTCGGATACTTCCGGTCTCGCGGCGAGAAGAAGTAC
JMSF009M05+           GCCGCCCGGTTCGGCCTCGAACCGTTCGGATACTTCCGGTCTCGCGGCGAGAAGAAGTAC
                      ____________________________________________________________
consensus             GCCGCCCGGTTCGGCCTCGAACCGTTCGGATACTTCCGGTCTCGCGGCGAGAAGAAGTAC
 
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JMSF038N19+           CACTCCTTTTCGCCGTACAACGCCATATCGGGGAGATCCCAGGGATCGAACTTGTAGAGA
JMSF018F02+                                       CGGGGAGATCCCAGGGATCGAACTTGTAGAGA
JMFF012K21+           CACTCCTTTTCGCCGTACAACGCCATATCGGGGAGATCCCAGGGATCGAACTTGTAGAGA
JMFF036J19+           CACTCCTTTTCGCCGTACAACGCCATATCGGGGAGATCCCAGGGATCGAACTTGTAGAGA
JMSF005K15+           CACTCCTTTTCGCCGTACAACGACATATCGGGGAGATCCCAGGGATCGAACTTGTAGAGA
JMSF037N19+           CACTCCTTTTCGCCGTACAACGCCATATCGGGGAGATCCCAGGGATCGAACTTGTAGAGA
JMSF009M05+           CACTCCTTTTCGCCGTACAACGCCATATCGGGGAGATCCCAGGGATCGAACTTGTAGAGA
                      ____________________________________________________________
consensus             CACTCCTTTTCGCCGTACAACGCCATATCGGGGAGATCCCAGGGATCGAACTTGTAGAGA
 
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JMSF038N19+           TCAATCTNGGCGATAATCGGAACGGAAATCGGCAACGACGCACACTTCCGGCACAGATAG
JMSF018F02+           TCAATCTCGGCGATAATCGGAACGGAAATCGGCAACGACGCACACTTCCGGCACAGATAG
JMFF012K21+           TCAATCTCGGCGATAATCGGAACGGAAATCGGCAACGACGCACACTTCCGGCACAGATAG
JMFF036J19+           TCAATCTCGGCGATAATCGGAACGGAAATCGGCAACGACGCACACTTCCGGCACAGATAG
JMSF005K15+           TCAATCTCGGCGATAATCGGAACGGAAATCGGCAACGACGCACACTTCCGGCACAGATAG
JMSF037N19+           TCAATCTCGGCGATAATCGGAACGGAAATCGGCAACGACGCACACTTCCGGCACAGATAG
JMSF009M05+           TCAATCTCGGCGATAATCGGAACGGAAATCGGCAACGACGCACACTTCCGGCACAGATAG
                      ____________________________________________________________
consensus             TCAATCTCGGCGATAATCGGAACGGAAATCGGCAACGACGCACACTTCCGGCACAGATAG
 
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JMSF038N19+           TGCATCACTAGCTCCTCATCCGTCGGATGAAACCTAAATCCAGGAGGTAACTGCAATCCC
JMSF018F02+           TGCATCACTAGCTCCTCATCCGTCGGATGAAACCTAAATCCAGGAGGTAACTGCAATCCC
JMFF012K21+           TGCATCACTAGCTCCTCATCCGTCGGATGAAACCTAAATCCAGGAGGTAACTGCAATCCC
JMFF036J19+           TGCATCACTAGCTCCTCATCCGTCGGATGAAACCTAAATCCAGGAGGTAACTGCAATCCC
JMSF005K15+           TGCATCACTAGCTCCTCATCCGTCGGATGAAACCTAAATCCAGGAGGTAACTGCAATCCC
JMSF037N19+           TGCATCACTAGCTCCTCATCCGTCGGATGAAACCTAAATCCAGGAGGTAACTGCAATCCC
JMSF009M05+           TGCATCACTAGCTCCTCATCCGTCGGATGAAACCTAAATCCAGGAGGTAACTGCAATCCC
                      ____________________________________________________________
consensus             TGCATCACTAGCTCCTCATCCGTCGGATGAAACCTAAATCCAGGAGGTAACTGCAATCCC
 
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JMSF038N19+           CCCGTCATTTTCCTGCAAAAATTTCACCTCTTTTTTTTACTATTTTTTTTTACAGTGAAT
JMSF018F02+           CCCGTCATTTTCCTGCAAAAATTTCACCTCTTTTTTTTACTATTTTTTTTTACAGTGAAT
JMFF012K21+           CCCGTCATTTTCCTGCAAAAATTTCACCTCTTTTTTTTACTATTTTTTTTTACAGTGAAT
JMFF036J19+           CCCGTCATTTTCCTGCAAAAATTTCACCTCTTTTTTTTACTATTTTTTTTTACAGTGAAT
JMSF005K15+           CCCGTCATTTTCCTGCAAAAATTTCACCTCTTTTTTTTACTATTTTTTTTTACAGTGAAT
JMSF037N19+           CCCGTCATTTTCCTGCAAAAATTTCACCTCTTTTTTTTACTATTTTTTTTTACAGTGAAT
JMSF009M05+           CCCGTCATTTTCCTGCAAAAATTTCACCTCTTTTTTTTACTATTTTTTTTTACAGTGAAT
                      ____________________________________________________________
consensus             CCCGTCATTTTCCTGCAAAAATTTCACCTCTTTTTTTTACTATTTTTTTTTACAGTGAAT
 
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JMSF038N19+           TTCTCCTTGTGGTTGGGTGAGTGAAGGGAGAAAA                          
JMSF018F02+           TTCTCCTTGTGGTTGGGTGAGTGAAGGGAGAAAAACAGAAGCTCT               
JMFF012K21+           TTCTCCTTGTGGTTGGGTGAGTGAAGGGAGAAAAACAGAAGCTCTGAAAATT        
JMFF036J19+           TTCTCCTTGTGGTTGGGTGAGTGAAGGGAGAAAAACAGAAGC                  
JMSF005K15+           TTCTCCTTGTGGTTGGGTGAGTGAAGGGAGAAAAACAGAAGCTCTGAAAATT        
JMSF037N19+           TTCTCCTTGTGGTTGGGTGAGTGAAGGGAGAAAAACAGAAGCTCTGAAAATT        
JMSF009M05+           TTCTCCTTGTGGTTGGGTGAGTGAAGGGAGAAAAACAGAAGCTCTGAAAATTGAAACGTC
                      ____________________________________________________________
consensus             TTCTCCTTGTGGTTGGGTGAGTGAAGGGAGAAAAACAGAAGCTCTGAAAATTGAAACGTC