Contig 002117:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF009K19Sequence288002117 (2)ref|XP_009766329.1|103PREDICTED: uncharacterized protein LOC104217722 [Nicotiana sylvestris]741009944 (2)ref|XP_009622453.1|324PREDICTED: uncharacterized protein LOC104113849 [Nicotiana tomentosiformis]
JMSF017N14Sequence216002117 (2)ref|XP_009622453.1|59.3PREDICTED: uncharacterized protein LOC104113849 [Nicotiana tomentosiformis]711009944 (2)ref|XP_009622453.1|227PREDICTED: uncharacterized protein LOC104113849 [Nicotiana tomentosiformis]

Alignment

This contig is upended


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JMSF009K19+ CAAGCATGGTGAGCTGCTGCTGACTGAAACCCAGAACTGATTTCAGAG
                      ____________________________________________________________
consensus CAAGCATGGTGAGCTGCTGCTGACTGAAACCCAGAACTGATTTCAGAG
 
. : . : . : . : . : . :
JMSF017N14+ GTAAGCATTTCCTGCTGCTATTTGCATCCAAACTGAGG
JMSF009K19+ TGTGGGAATAGAGTGGGAAATTGTAAGCATTTCCTGCTGCTATTTGCATCCAAACTGAGG
                      ____________________________________________________________
consensus TGTGGGAATAGAGTGGGAAATTGTAAGCATTTCCTGCTGCTATTTGCATCCAAACTGAGG
 
. : . : . : . : . : . :
JMSF017N14+ CCCCAAGACCCACCCATGGTGGCCTTGTCCCTCCCTTCAAGTTCACCATTCTTGAGACCC
JMSF009K19+ CCCCAAGACCCACCCATGGTGGCCTTGTCCCTCCCTTCAAGTTCACCATTCTTGAGACCC
                      ____________________________________________________________
consensus CCCCAAGACCCACCCATGGTGGCCTTGTCCCTCCCTTCAAGTTCACCATTCTTGAGACCC
 
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JMSF017N14+ TTTGTTTAGCTCTCAAGAATCAGGGGATAGCAGAGGAAAGAGTGGGTTTTGATCT-ATTT
JMSF009K19+ TTTGTTTAGCTCTCAAGAATCAGGGGATAGCAGAGGAAAGAGTGGGTTTTGATCTGATTT
                      ____________________________________________________________
consensus TTTGTTTAGCTCTCAAGAATCAGGGGATAGCAGAGGAAAGAGTGGGTTTTGATCTGATTT
 
. : . : . : . : . : . :
JMSF017N14+ GGTTTTGCAGGGAGGGGGGAAGAATTGAGGAAAGGAGTGTGAAAGTGAGAGATTGTGTC
JMSF009K19+ GGTTTTGCAGGGAGGGGGGAAGAATTGAGGAAAGGAGTGTGAAAGTGAGAGATTGTGTCC
                      ____________________________________________________________
consensus GGTTTTGCAGGGAGGGGGGAAGAATTGAGGAAAGGAGTGTGAAAGTGAGAGATTGTGTCC