Contig 002108:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF008I11Sequence326002108 (2)gb|KCW56669.1|3e-18hypothetical protein EUGRSUZ_I02369 [Eucalyptus grandis]762013893 (2)ref|XP_011100947.1|277PREDICTED: UPF0183 protein At3g51130 isoform X1 [Sesamum indicum]
JMSF049E04Sequence705002108 (2)ref|XP_009599857.1|434PREDICTED: UPF0183 protein At3g51130 isoform X3 [Nicotiana tomentosiformis]778013893 (2)ref|XP_011100947.1|327PREDICTED: UPF0183 protein At3g51130 isoform X1 [Sesamum indicum]

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF049E04+ GA
                      ____________________________________________________________
consensus GA
 
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JMSF049E04+ ATGTGTTGGCCACCGACCGTAAACCATAATTCTTCCCCTAGCTTAACACGCACTTCCTCC
                      ____________________________________________________________
consensus ATGTGTTGGCCACCGACCGTAAACCATAATTCTTCCCCTAGCTTAACACGCACTTCCTCC
 
. : . : . : . : . : . :
JMSF049E04+ ATATAAAGGCTTCCAGCGGGCAAAGGAGGAGCACAAGCCTTGTCCATCGAGGACCCCACA
                      ____________________________________________________________
consensus ATATAAAGGCTTCCAGCGGGCAAAGGAGGAGCACAAGCCTTGTCCATCGAGGACCCCACA
 
. : . : . : . : . : . :
JMSF049E04+ CCGACTTTACTGCCCGTAGAACTATCGTATATCGAGACACGACATGTAACAGGAGTTGTG
                      ____________________________________________________________
consensus CCGACTTTACTGCCCGTAGAACTATCGTATATCGAGACACGACATGTAACAGGAGTTGTG
 
. : . : . : . : . : . :
JMSF049E04+ CCATCAGGGAATTCCAGAGGCAGTTCCGCTTCTCCATCACGACAACATTCTGTATACTGT
                      ____________________________________________________________
consensus CCATCAGGGAATTCCAGAGGCAGTTCCGCTTCTCCATCACGACAACATTCTGTATACTGT
 
. : . : . : . : . : . :
JMSF049E04+ GAGGGAATTGGGAAAGCAAACGACAACCCCGGGTAAAATAACGTGTAAACACCTCTGTCT
                      ____________________________________________________________
consensus GAGGGAATTGGGAAAGCAAACGACAACCCCGGGTAAAATAACGTGTAAACACCTCTGTCT
 
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JMSF049E04+ TTGTCATACTTGCCAGGATATGTCGGACCAAAAAGAGCATAAACGGCAACAAAAGTGGCT
                      ____________________________________________________________
consensus TTGTCATACTTGCCAGGATATGTCGGACCAAAAAGAGCATAAACGGCAACAAAAGTGGCT
 
. : . : . : . : . : . :
JMSF049E04+ AGGGTGGATGGTCCTCCAATCAAAGAGGTAGCATAACGCATTTGAAGCCGTTTCACATCA
                      ____________________________________________________________
consensus AGGGTGGATGGTCCTCCAATCAAAGAGGTAGCATAACGCATTTGAAGCCGTTTCACATCA
 
. : . : . : . : . : . :
JMSF049E04+ AAAATTTCAATAAGACGCAGTCTCTGTGACCAAGGATCAAAGCGAAGATGAAAGCCATGG
                      ____________________________________________________________
consensus AAAATTTCAATAAGACGCAGTCTCTGTGACCAAGGATCAAAGCGAAGATGAAAGCCATGG
 
. : . : . : . : . : . :
JMSF049E04+ TCCGGGAAGCTGATAACAATATCAAGTTTTAAAGGATCCTCATCGTAATGCTTCACGTGA
                      ____________________________________________________________
consensus TCCGGGAAGCTGATAACAATATCAAGTTTTAAAGGATCCTCATCGTAATGCTTCACGTGA
 
. : . : . : . : . : . :
JMSF049E04+ ACAACATCATAAATGTTAGGCTTCTGCTCTATTTGAGCAAAGGCCTCGCAAATCGGCATT
JMSF008I11+ GAGCAAAGGCCTCGCAAATCGGCATT
                      ____________________________________________________________
consensus ACAACATCATAAATGTTAGGCTTCTGCTCTATTTGAGCAAAGGCCTCGCAAATCGGCATT
 
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JMSF049E04+ CCGAGAGAGAAGGGACCGATGCCGGCGCCGGGGCGGAGATCGAAAACGATGGCGCCCATG
JMSF008I11+ CCGAGAGAGAAGGGACCGATGCCGGCGCCGGGGCGGAGATCGAAAACGATGGCGCCCATG
                      ____________________________________________________________
consensus CCGAGAGAGAAGGGACCGATGCCGGCGCCGGGGCGGAGATCGAAAACGATGGCGCCCATG
 
. : . : . : . : . : . :
JMSF049E04+ GCTGTGCCTTCGCACCTGCGTCTCGGTCTCTGCTGCATCATT
JMSF008I11+ GCTGTGCCTTCGCACCTGCGTCTCGGTCTCTGCTGCATCATTATGAAGGACTTATTGTTA
                      ____________________________________________________________
consensus GCTGTGCCTTCGCACCTGCGTCTCGGTCTCTGCTGCATCATTATGAAGGACTTATTGTTA
 
. : . : . : . : . : . :
JMSF008I11+ TTATTACAAAAAATACATATATCGATTGAATTGCGATAGCTGATAGTGATGTCCAATTGA
                      ____________________________________________________________
consensus TTATTACAAAAAATACATATATCGATTGAATTGCGATAGCTGATAGTGATGTCCAATTGA
 
. : . : . : . : . : . :
JMSF008I11+ ATTTGAGGATGAAGAGATTTTTGCCACTCTTTGGCAGACGATTATAGGTGAGATGAGATG
                      ____________________________________________________________
consensus ATTTGAGGATGAAGAGATTTTTGCCACTCTTTGGCAGACGATTATAGGTGAGATGAGATG
 
. : . : . : . : . : . :
JMSF008I11+ AGATTGATTGCTTCAAGTAGACGGAGACGATGTGGTTGGAATTGGGAAAGGCAGAAAGCC
                      ____________________________________________________________
consensus AGATTGATTGCTTCAAGTAGACGGAGACGATGTGGTTGGAATTGGGAAAGGCAGAAAGCC