| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF006N11 | Sequence | 308 | 002085 (7) | gb|EPS70427.1| | 69.3 | digalactosyldiacylglycerol synthase 1, chloroplastic, partial [Genlisea aurea] | 803 | 001038 (10) | gb|AAT67159.1| | 6e-125 | digalactosyldiacylglycerol synthase [Nicotiana tabacum] |
| JMFF012K02 | Sequence | 308 | 002085 (7) | gb|EPS70427.1| | 69.3 | digalactosyldiacylglycerol synthase 1, chloroplastic, partial [Genlisea aurea] | 694 | 001038 (10) | gb|AAT67159.1| | 2e-93 | digalactosyldiacylglycerol synthase [Nicotiana tabacum] |
| JMFF040N23 | Sequence | 308 | 002085 (7) | gb|EPS70427.1| | 69.3 | digalactosyldiacylglycerol synthase 1, chloroplastic, partial [Genlisea aurea] | 751 | 001038 (10) | gb|AAT67159.1| | 1e-113 | digalactosyldiacylglycerol synthase [Nicotiana tabacum] |
| JMFS158B08 | Sequence | 520 | 002085 (7) | gb|AHM22933.1| | 1e-32 | digalactosyldiacylglycerol synthase 1 [Nicotiana tabacum] | |||||
| JMSF006B21 | Sequence | 288 | 002085 (7) | gb|EPS70427.1| | 50.1 | digalactosyldiacylglycerol synthase 1, chloroplastic, partial [Genlisea aurea] | 245 | 009803 (22) | ref|XP_009603475.1| | 5e-09 | PREDICTED: DELLA protein GAI1-like [Nicotiana tomentosiformis] |
| JMSF019E03 | Sequence | 224 | 002085 (7) | 792 | 001038 (10) | gb|AAT67159.1| | 4e-127 | digalactosyldiacylglycerol synthase [Nicotiana tabacum] | |||
| JMSF042B01 | Sequence | 741 | 002085 (7) | gb|AHM22933.1| | 2e-43 | digalactosyldiacylglycerol synthase 1 [Nicotiana tabacum] | 769 | 001038 (10) | gb|AAT67159.1| | 5e-121 | digalactosyldiacylglycerol synthase [Nicotiana tabacum] |
This contig is upended
. : . : . : . : . : . :
JMSF042B01+ CGCTATTCTTAATCCCTTCAA
____________________________________________________________
consensus CGCTATTCTTAATCCCTTCAA
. : . : . : . : . : . :
JMSF042B01+ GAATCTCCGCCGGTGAAGAGCTTGTAGTCTTGAGCTCTGCCTCAATCTCCTTACACCGCG
____________________________________________________________
consensus GAATCTCCGCCGGTGAAGAGCTTGTAGTCTTGAGCTCTGCCTCAATCTCCTTACACCGCG
. : . : . : . : . : . :
JMSF042B01+ TCTGGAAGGCTTTAATTGGCTCCCAACTGGATTCCCCGGAGTGCCCTTCCTCCTTTCCCC
____________________________________________________________
consensus TCTGGAAGGCTTTAATTGGCTCCCAACTGGATTCCCCGGAGTGCCCTTCCTCCTTTCCCC
. : . : . : . : . : . :
JMFS158B08+ TCCGTGAACCTCAGCCGCCTCCAGGTCCTCCACCTTTCACTTTNGCTGTCCTCCT
JMSF042B01+ CTCCTTCCGTGAACCTCAGCCGCCTCCACGTCCTCCACCTCTCACTTTCGCTGTCCTCCT
____________________________________________________________
consensus CTCCTTCCGTGAACCTCAGCCGCCTCCAGGTCCTCCACCTTTCACTTTCGCTGTCCTCCT
. : . : . : . : . : . :
JMFS158B08+ CCACATCCGGCGCAATCGCGTTCCTAAACGCTGACAAGTCAATCCGAAGCTTCCCTTTCG
JMSF042B01+ CCACATCCGGCGCAATCGCGTTCCTAAACGCTGACAAGTCAATCCGAAGCTTCCCTTTCG
____________________________________________________________
consensus CCACATCCGGCGCAATCGCGTTCCTAAACGCTGACAAGTCAATCCGAAGCTTCCCTTTCG
. : . : . : . : . : . :
JMFS158B08+ TGCCCCACTTGAAGTCCGGCGACGAGTACGCCCTCCGAAATTCCGAAATCTTGGGGCGGA
JMSF042B01+ TGCCCCACTTGAAGTCCGGCGACGAGTACGCCCTCCGAAATTCCGAAATCTTGGGGCGGA
____________________________________________________________
consensus TGCCCCACTTGAAGTCCGGCGACGAGTACGCCCTCCGAAATTCCGAAATCTTGGGGCGGA
. : . : . : . : . : . :
JMFS158B08+ GCTTCTTGACGAACTCGATCTCCGCCGGAGTTGAGACAGCCGACGCCGTAACTGTAGGGA
JMFF040N23+ GAGTTGAGACAGCCGACGCCGTAACTGTAGGGA
JMFF006N11+ GAGTTGAGACAGCCGACGCCGTAACTGTAGGGA
JMFF012K02+ GAGTTGAGACAGCCGACGCCGTAACTGTAGGGA
JMSF042B01+ GCTTCTTGACGAACTCGATCTCCGCCGGAGTTGAGACAGCCGACGCCGTAACTGTAGGGA
____________________________________________________________
consensus GCTTCTTGACGAACTCGATCTCCGCCGGAGTTGAGACAGCCGACGCCGTAACTGTAGGGA
. : . : . : . : . : . :
JMFS158B08+ CAGTAAACGAGGCGGAGTTAATGAAGTGCTCCACCCCCTGGTCGGCAAGTTTGAAGATGG
JMFF040N23+ CAGTAAACGAGGCGGAGTTAATGAAGTGCTCCACCCCCTGGTCGGCAAGTTTGAAGATGG
JMFF006N11+ CAGTAAACGAGGCGGAGTTAATGAAGTGCTCCACCCCCTGGTCGGCAAGTTTGAAGATGG
JMFF012K02+ CAGTAAACGAGGCGGAGTTAATGAAGTGCTCCACCCCCTGGTCGGCAAGTTTGAAGATGG
JMSF042B01+ CAGTAAACGAGGCGGAGTTAATGAAGTGCTCCACCCCCTGGTCGGCAAGTTTGAAGATGG
____________________________________________________________
consensus CAGTAAACGAGGCGGAGTTAATGAAGTGCTCCACCCCCTGGTCGGCAAGTTTGAAGATGG
. : . : . : . : . : . :
JMFS158B08+ AGTTGGCTCGGTTCCTGAGGAGCTCAAAATCCGCGTCGGCTCACGCACGCATCTCCCGCA
JMFF040N23+ AGTTGGCTCGGTTCCTGAGGAGCTCAAAATCCGCGTCGGCTGAGGTACGCATCTCCCGCA
JMFF006N11+ AGTTGGCTCGGTTCCTGAGGAGCTCAAAATCCGCGTCGGCTGAGGTACGCATCTCCCGCA
JMFF012K02+ AGTTGGCTCGGTTCCTGAGGAGCTCAAAATCCGCGTCGGCTGAGGTACGCATCTCCCGCA
JMSF042B01+ AGTTGGCTCGGTTCCTGAGGAGCTCAAAATCCGCGTCGGCTGAGGTACGCATCTCCCGCA
JMSF006B21+ TCCTGAGGAGCTCAAAATCCGCGTCGGCTGAGGTACGCATCTCCCGCA
____________________________________________________________
consensus AGTTGGCTCGGTTCCTGAGGAGCTCAAAATCCGCGTCGGCTGAGGTACGCATCTCCCGCA
. : . : . : . : . : . :
JMFS158B08+ AACCCTTGGAGATGAACGATACGATCGAGGCGGAGCTCGCCGTCCCCGGCGCCGTGGCCC
JMFF040N23+ AACCCTTGGAGATGAACGATACGATCGAGGCGGAGCTCGCCGTCCCCGGCGCCGTGGCCC
JMFF006N11+ AACCCTTGGAGATGAACGATACGATCGAGGCGGAGCTCGCCGTCCCCGGCGCCGTGGCCC
JMFF012K02+ AACCCTTGGAGATGAACGATACGATCGAGGCGGAGCTCGCCGTCCCCGGCGCCGTGGCCC
JMSF042B01+ AACCCTTGGAGATGAACGATACGATCGAGGCGGAGCTCGCCGTCCCCGGCGCCGTGGCCC
JMSF019E03+ TGGAGATGAACGATACGATCGAGGCGGAGCTCGCCGTCCCCGGCGCCGTGGCCC
JMSF006B21+ AACCCTTGGAGATGAACGATACGATCGAGGCGGAGCTCGCCGTCCCCGGCGCCGTGGCCC
____________________________________________________________
consensus AACCCTTGGAGATGAACGATACGATCGAGGCGGAGCTCGCCGTCCCCGGCGCCGTGGCCC
. : . : . : . : . : . :
JMFS158B08+ TCGCCTCCGCCGGCTTAATATTAATCATAATCGTTTTCTATTTCCCCACAATCGAATTCC
JMFF040N23+ TCGCCTCCGCCGGCTTAATATTAATCATAATCGTTTTCTATTTCCCCACAATCGAATTCC
JMFF006N11+ TCGCCTCCGCCGGCTTAATATTAATCATAATCGTTTTCTATTTCCCCACAATCGAATTCC
JMFF012K02+ TCGCCTCCGCCGGCTTAATATTAATCATAATCGTTTTCTATTTCCCCACAATCGAATTCC
JMSF042B01+ TCGCCTCCGCCGGCTTAATATTAATCATAATCGTTTTCTATTTCCCCACAATCGAATTCC
JMSF019E03+ TCGCCTCCGCCGGCTTAATATTAATCATAATCGTTTTCTATTTCCCCACAATCGAATTCC
JMSF006B21+ TCGCCTCCGCCGGCTTAATATTAATCATAATCGTTTTCTATTTCCCCACAATCGAATTCC
____________________________________________________________
consensus TCGCCTCCGCCGGCTTAATATTAATCATAATCGTTTTCTATTTCCCCACAATCGAATTCC
. : . : . : . : . : . :
JMFS158B08+ GATGAGATTACCGAAAATTCACTATGAATCGGTAGGGTTCTCGGA
JMFF040N23+ GATGAGATTACCGAAAATTCACTATGAATCGGTAG
JMFF006N11+ GATGAGATTACCGAAAATTCACTATGAATCGGTAG
JMFF012K02+ GATGAGATTACCGAAAATTCACTATGAATCGGTAG
JMSF042B01+ GATGAGATTACCGAAAATTCACTATGAATCGGTAGGGTTCTCGGAGAATTCGAGCTTCAG
JMSF019E03+ GATGAGATTACCGAAAATTCACTATGAATCGGTAGGGTTCTCGGAGAATTCGAGCTTCAG
JMSF006B21+ GATGAGATTACCGAAAATTCACTATGAATCGGTAGGGTTCTCGGAGAATTCGAGCTTCAG
____________________________________________________________
consensus GATGAGATTACCGAAAATTCACTATGAATCGGTAGGGTTCTCGGAGAATTCGAGCTTCAG
. : . : . : . : . : . :
JMSF042B01+ TTTGGGGGAAAAGAAAACGATACCGGGCGGCTGAGGATTTAACGGCTAGGATTTTTTGTC
JMSF019E03+ TTTGGGGGAAAAGAAAACGATACCGGGCGGCTGAGGATTTAACGGCTAG
JMSF006B21+ TTTGGGGGAAAAGAAAACGATACCGGGCGGCTGAGGATTTAACGGCTAGGATTTTTTGTC
____________________________________________________________
consensus TTTGGGGGAAAAGAAAACGATACCGGGCGGCTGAGGATTTAACGGCTAGGATTTTTTGTC