Contig 002076:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF041N04Sequence652002076 (2)ref|XP_009776890.1|4e-125PREDICTED: probable pectate lyase 4 [Nicotiana sylvestris]606017010ref|XP_009622619.1|3e-69PREDICTED: probable pectate lyase 4 [Nicotiana tomentosiformis]
JMSF004P03Sequence318002076 (2)ref|XP_004236768.1|5e-31PREDICTED: probable pectate lyase 4 [Solanum lycopersicum]

Alignment

This contig is upended


. : . : . : . : . : . :
JMFF041N04+ GTGTACCATCAAAAAAACAATGGTGAATGGTCACTCTTATACACCGATCATTGAC
                      ____________________________________________________________
consensus GTGTACCATCAAAAAAACAATGGTGAATGGTCACTCTTATACACCGATCATTGAC
 
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JMFF041N04+ ATGAGAGGGGTCTGCTCCAATAAGCTTTGTTTTGTCATGATTTGCANAATAGCATCTAGA
                      ____________________________________________________________
consensus ATGAGAGGGGTCTGCTCCAATAAGCTTTGTTTTGTCATGATTTGCANAATAGCATCTAGA
 
. : . : . : . : . : . :
JMFF041N04+ AACAGTTATGTCTGTGCTTTGTCTTGTTATGTCTATTAGGCCATCATCATAATCTCGGAG
                      ____________________________________________________________
consensus AACAGTTATGTCTGTGCTTTGTCTTGTTATGTCTATTAGGCCATCATCATAATCTCGGAG
 
. : . : . : . : . : . :
JMFF041N04+ TGAACAGCGATCAATCCATATGTGCCTAGAATTGGGTTTTATTTGAATGCCATCAACATC
                      ____________________________________________________________
consensus TGAACAGCGATCAATCCATATGTGCCTAGAATTGGGTTTTATTTGAATGCCATCAACATC
 
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JMFF041N04+ ATGACCCCTGCCACCTTCAAACTCCAAGTTGCATACAATTATATGTTCACATTCCTTTAG
                      ____________________________________________________________
consensus ATGACCCCTGCCACCTTCAAACTCCAAGTTGCATACAATTATATGTTCACATTCCTTTAG
 
. : . : . : . : . : . :
JMFF041N04+ ACGTAATCCTTTGCCAGTCAGCTTTACCCTTTGTCCACGCCCGTCAATTGTCTTATAAGA
                      ____________________________________________________________
consensus ACGTAATCCTTTGCCAGTCAGCTTTACCCTTTGTCCACGCCCGTCAATTGTCTTATAAGA
 
. : . : . : . : . : . :
JMFF041N04+ TGACACACTCAGGTAGGATGAGAGATGAATGACACCTGAAACTTCAAAGATAATCCACAG
JMSF004P03+ TTCAAAGATAATCCACAG
                      ____________________________________________________________
consensus TGACACACTCAGGTAGGATGAGAGATGAATGACACCTGAAACTTCAAAGATAATCCACAG
 
. : . : . : . : . : . :
JMFF041N04+ TGGCTCTTTCTTACGGCATCCATCACGAAGTGATCCTGGACCATCATCGGCCAAAGTGGT
JMSF004P03+ TGGCTCTTTCTTACGGCATCCATCACGAAGTGATCCTGGACCATCATCGGCCAAAGTGGT
                      ____________________________________________________________
consensus TGGCTCTTTCTTACGGCATCCATCACGAAGTGATCCTGGACCATCATCGGCCAAAGTGGT
 
. : . : . : . : . : . :
JMFF041N04+ AACACGATAAAGGCCACCGTTGAGGCCGCCGATGGAGAACCTTCCGAATCCTTCGGCTCG
JMSF004P03+ AACACGATAAAGGCCACCGTTGAGGCCGCCGATGGAGAACCTTCCGAATCCTTCGGCTCG
                      ____________________________________________________________
consensus AACACGATAAAGGCCACCGTTGAGGCCGCCGATGGAGAACCTTCCGAATCCTTCGGCTCG
 
. : . : . : . : . : . :
JMFF041N04+ ACCGGCCAGAGATCTGAGGTTAAAGTCGACGTCAGCGTAAGGTAATGCTGCCATGGTGGT
JMSF004P03+ ACCGGCCAGAGATCTGAGGTTAAAGTCGACGTCAGCGTAAGGTAATGCTGCCATGGTGGT
                      ____________________________________________________________
consensus ACCGGCCAGAGATCTGAGGTTAAAGTCGACGTCAGCGTAAGGTAATGCTGCCATGGTGGT
 
. : . : . : . : . : . :
JMFF041N04+ TCCTGTCCTGGCGGACCACTGATTTCTTCGGCGGTAACCGTCGCGGGAAGTTAAA
JMSF004P03+ TCCTGTCCTGGCGGACCACTGATTTCTTCGGCGGTAACCGTCGCGGGAAGTTAAACCGGA
                      ____________________________________________________________
consensus TCCTGTCCTGGCGGACCACTGATTTCTTCGGCGGTAACCGTCGCGGGAAGTTAAACCGGA
 
. : . : . : . : . : . :
JMSF004P03+ GTTTTGTCTCGGCGGGCTGTTTTTTTATGTCTTGGGACGTTAACGTCACCGAGAATTTCC
                      ____________________________________________________________
consensus GTTTTGTCTCGGCGGGCTGTTTTTTTATGTCTTGGGACGTTAACGTCACCGAGAATTTCC