Contig 002070:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF032F21+              ATCAGCTGTGATAGGGAGGAAAAAGAAACACCTGAGTTATATACTATATAGAATATC
                      ____________________________________________________________
consensus                ATCAGCTGTGATAGGGAGGAAAAAGAAACACCTGAGTTATATACTATATAGAATATC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF032F21+           CAATAGAAAGTAATCGTATTAGATAATCAGAATCCCAGATCATTAGAAATGGACAACAAA
                      ____________________________________________________________
consensus             CAATAGAAAGTAATCGTATTAGATAATCAGAATCCCAGATCATTAGAAATGGACAACAAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF032F21+           ACAATTTTAGACTGATTTATATAGCGAAATTGACAGAATAATTTCAAATTGGATTATTAA
                      ____________________________________________________________
consensus             ACAATTTTAGACTGATTTATATAGCGAAATTGACAGAATAATTTCAAATTGGATTATTAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF032F21+           AATCAACATTAGAAACTCTAGATTTGAGCATGCAAACCAACATATACATGAAACTCTAGA
                      ____________________________________________________________
consensus             AATCAACATTAGAAACTCTAGATTTGAGCATGCAAACCAACATATACATGAAACTCTAGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF032F21+           AAGATCCACGTTGATTAATAAAACAATTGATAGAAAATTTAAACACTAATTTTCGCAGAT
JMSF004F18+                                                               TCGCAGAT
                      ____________________________________________________________
consensus             AAGATCCACGTTGATTAATAAAACAATTGATAGAAAATTTAAACACTAATTTTCGCAGAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF032F21+           GTGAAGCGCTAGATGAAGTAATCTTAGAAATAAATGAATTCATAACCTCTATGAAAACCC
JMSF004F18+           GTGAAGCGCTAGATGAAGTAATCTTAGAAATAAATGAATTCATAACCTCTATGAAAACCC
                      ____________________________________________________________
consensus             GTGAAGCGCTAGATGAAGTAATCTTAGAAATAAATGAATTCATAACCTCTATGAAAACCC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF032F21+           TAGATCAGTAGAACTTTACCGAAAAAACAGATTTAACCTCAACATTGGATCAGTGCCGTA
JMSF004F18+           TAGATCAGTAGAACTTTACCGAAAAAACAGATTTAACCTCAACATTGGATCAGTGCCGTA
                      ____________________________________________________________
consensus             TAGATCAGTAGAACTTTACCGAAAAAACAGATTTAACCTCAACATTGGATCAGTGCCGTA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF032F21+           CTGAGACTAGATCCGCCAGAGAAGAATACAGTTGTCGAACCCAAAAATCAAAGACATGCT
JMSF004F18+           CTGAGACTAGATCCGCCAGAGAAGAATACAGTTGTCGAACCCAAAAATCAAAGACATGCT
                      ____________________________________________________________
consensus             CTGAGACTAGATCCGCCAGAGAAGAATACAGTTGTCGAACCCAAAAATCAAAGACATGCT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF032F21+           AGATTGTAGGGGCGAGGAAAGGTAACGAAGAATCCATTTGCTAGCTAAATTTTTCGCAGG
JMSF004F18+           AGATTGTAGGGGCGAGGAAAGGTAACGAAGAATCCATTTGCTAGCTAAATTTTTCGCAGG
                      ____________________________________________________________
consensus             AGATTGTAGGGGCGAGGAAAGGTAACGAAGAATCCATTTGCTAGCTAAATTTTTCGCAGG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF032F21+           AATAACATCAGATAAGAAATTCTAAGCACTAGAGCTGTGTATTGTATTGTAGACTATGGG
JMSF004F18+           AATAACATCAGATAAGAAATTCTAAGCACTAGAGCTGTGTATTGTATTGTAGACTATGGG
                      ____________________________________________________________
consensus             AATAACATCAGATAAGAAATTCTAAGCACTAGAGCTGTGTATTGTATTGTAGACTATGGG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF032F21+           GTTTTGGTGGATCTTTGAGGGAATTGAGTTAACTTTCCAGATCTGTGCGATAAAGCTAGC
JMSF004F18+           GTTTTGGTGGATCTTTGAGGGAATTGAGTTAACTTTCCAGATCTGTGCGATAAAGCTAGC
                      ____________________________________________________________
consensus             GTTTTGGTGGATCTTTGAGGGAATTGAGTTAACTTTCCAGATCTGTGCGATAAAGCTAGC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF032F21+           CACGAGCAAGGAAAATAGCCCAAATGCTTAGC                            
JMSF004F18+           CACGAGCAAGGAAAATAGCCCAAATGCTTAGCTAGAATGTTTCCAGAATCATCCACCATC
                      ____________________________________________________________
consensus             CACGAGCAAGGAAAATAGCCCAAATGCTTAGCTAGAATGTTTCCAGAATCATCCACCATC