clone | 5'-sequence | 3'-sequence | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
JMFN014O11 | Sequence | 601 | 002056 (6) | gb|ADM33676.1| | 6e-59 | late embryogenesis abundant protein 14 [Ipomoea batatas] | |||||
JMFN015L08 | Sequence | 591 | 002056 (6) | gb|ADM33676.1| | 2e-88 | late embryogenesis abundant protein 14 [Ipomoea batatas] | |||||
JMFN028N20 | Sequence | 617 | 002056 (6) | gb|ADM33676.1| | 5e-89 | late embryogenesis abundant protein 14 [Ipomoea batatas] | |||||
JMFN031L06 | Sequence | 571 | 002056 (6) | gb|ADM33676.1| | 5e-90 | late embryogenesis abundant protein 14 [Ipomoea batatas] | |||||
JMSF003B11 | Sequence | 195 | 002056 (6) | gb|ADM33676.1| | 5e-07 | late embryogenesis abundant protein 14 [Ipomoea batatas] | 688 | 002056 (6) | gb|ADM33676.1| | 1e-89 | late embryogenesis abundant protein 14 [Ipomoea batatas] |
This contig is upended
. : . : . : . : . : . :
JMFN015L08+ GATTTGATGAAATGAAACAAGGTACATACTACATAGTGCAGAAAGCAACTTAT
rJMSF003B11- CATACTACATAGTGCAGAAAGCAACTTAT
____________________________________________________________
consensus GATTTGATGAAATGAAACAAGGTACATACTACATAGTGCAGAAAGCAACTTAT
. : . : . : . : . : . :
JMFN015L08+ TGTAAGACTACATTATTCATCATCATCCTATGACTACATATAACACCACTGTTAATGATC
JMFN028N20+ GACTACATTATTCATCATCATCCTATGACTACATATAACACCACTGTTAATGATC
JMFN014O11+ CTGTTAATGATC
rJMSF003B11- TGTAAGACTACATTATTCATCATCATCCTATGACTACATATAACACCACTGTTAATGATC
____________________________________________________________
consensus TGTAAGACTACATTATTCATCATCATCCTATGACTACATATAACACCACTGTTAATGATC
. : . : . : . : . : . :
JMFN015L08+ ATGTCTGTTAGGCAGCTTCTGGTTCTGATTTCTTCCAGAAATCAGAAAAGGTTGGGAGCT
JMFN028N20+ ATGTCTGTTAGGCAGCTTCTGGTTCTGATTTCTTCCAGAAATCAGAAAAGGTTGGGAGCT
JMFN031L06+ AGGCAGCTTCGGGTTCTGATTTCTTCCAGAAATCAGAAAAGGTTGGGAGCT
JMFN014O11+ ATGTCTGTTAGGCAGCTTCTGGTTCTGATTTCTTCCAGAAATCAGAAAAGGTTGGGAGCT
rJMSF003B11- ATGTCTGTTAGGCAGCTTCTGGTTCTGATTTCTTCCAGAAATCAGAAAAGGTTGGGAGCT
____________________________________________________________
consensus ATGTCTGTTAGGCAGCTTCTGGTTCTGATTTCTTCCAGAAATCAGAAAAGGTTGGGAGCT
. : . : . : . : . : . :
JMFN015L08+ TGATCTCACCCGACTGAGACAGTGGGATGGTAAAGTTTCCAACGACAGGAAGATCAATGA
JMFN028N20+ TGATCTCACCCGACTGAGACAGTGGGATGGTAAAGTTTCCAACGACAGGAAGATCAATGA
JMFN031L06+ GGATCTCACCCGACTGAGACAGTGGGATGGTAAAGTTTCCAACGACAGGAAGATCAATGA
JMFN014O11+ TGATCTCACCCGACTGAGACAGTGGGATGGTAAAGTTTCCAACGACAGGAAGATCAATGA
rJMSF003B11- TGATCTCACCCGACTGAGACAGTGGGATGGTAAAGTTTCCAACGACAGGAAGATCAATGA
____________________________________________________________
consensus TGATCTCACCCGACTGAGACAGTGGGATGGTAAAGTTTCCAACGACAGGAAGATCAATGA
. : . : . : . : . : . :
JMFN015L08+ TTAGACCCAAATCAAGTTGATAGTCAATGTCCCAATCTCCACCAATGTCCCTCGCCAAAC
JMFN028N20+ TTAGACCCAAATCAAGTTGATAGTCAATGTCCCAATCTCCACCAATGTCCCTCGCCAAAC
JMFN031L06+ TTAGACCCAAATCAAGTTGATAGTCAATGTCCCAATCTCCACCAATGTCCCTCGCCAAAC
JMFN014O11+ TTAGACCCAAATCAAGTTGATAGTCAATGTCCCAATCTCCACCAATGTCCCTCGCCAAAC
rJMSF003B11- TTAGACCCAAATCAAGTTGATAGTCAATGTCCCAATCTCCACCAATGTCCCTCGCCAAAC
____________________________________________________________
consensus TTAGACCCAAATCAAGTTGATAGTCAATGTCCCAATCTCCACCAATGTCCCTCGCCAAAC
. : . : . : . : . : . :
JMFN015L08+ TCACCACCACACTGTGTGGCACCTTCACTGCCACATCAAGGGTGGTTGTTTCCTTTCCCG
JMFN028N20+ TCACCACCACACTGTGTGGCACCTTCACTGCCACATCAAGGGTGGTTGTTTCCTTTCCCG
JMFN031L06+ TCACCACCACACTGTGTGGCACCTTCACTGCCACATCAAGGGTGGTTGTTTCCTTTCCCG
JMFN014O11+ TCACCACCACACTGTGTGGCACCTTCACTGCCACATCAAGGGTGGTTGTTTCCTTTCCCG
rJMSF003B11- TCACCACCACACTGTGTGGCACCTTCACTGCCACATCAAGGGTGGTTGTTTCCTTTCCCG
____________________________________________________________
consensus TCACCACCACACTGTGTGGCACCTTCACTGCCACATCAAGGGTGGTTGTTTCCTTTCCCG
. : . : . : . : . : . :
JMFN015L08+ TAATTGACCCTGGGTCTGGAATCGTGCCTGAAGCTATCACCCTGCCGGCGCTCTTGAGCT
JMFN028N20+ TAATTGACCCTGGGTCTGGAATCGTGCCTGAAGCTATCACCCTGCCGGCGCTCTTGAGCT
JMFN031L06+ TAATTGACCCTGGGTCTGGAATCGTGCCTGAAGCTATCACCCTGCCGGCGCTCTTGAGCT
JMFN014O11+ TAATTGACCCTGGGTCTGGAATCGTGCCTGAAGCTATCACCCTGCCGGCGCTCTTGAGCT
rJMSF003B11- TAATTGACCCTGGGTCTGGAATCGTGCCTGAAGCTATCACCCTGCCGGCGCTCTTGAGCT
____________________________________________________________
consensus TAATTGACCCTGGGTCTGGAATCGTGCCTGAAGCTATCACCCTGCCGGCGCTCTTGAGCT
. : . : . : . : . : . :
JMFN015L08+ CGTATTTGATCTCGCAGATGGGAATGGAAACAGAGTAAGGGTTCTTGACGTCGA-CCTTA
JMFN028N20+ CGTATTTGATCTCGCAGATGGGAATGGAAACAGAGTAAGGGTTCTTGACGTCGA-CCTTA
JMFN031L06+ CGTATTTGATCTCGCAGATGGGAATGGAAACAGAGTAAGGGTTCTTGACGTCGA-CCTTA
JMFN014O11+ CGTATTTGATCTCGCAGATGGGAATGGAAACAGAGTAAGGGTTCTTGACGTCGATCCTTA
rJMSF003B11- CGTATTTGATCTCGCAGATGGGAATGGAAACAGAGTAAGGGTTCTTGACGTCGA-CCTTA
____________________________________________________________
consensus CGTATTTGATCTCGCAGATGGGAATGGAAACAGAGTAAGGGTTCTTGACGTCGA-CCTTA
. : . : . : . : . : . :
JMFN015L08+ GCTAGAAAGGAAAAACCGTCGAATCCAACACCTTTGATATCAACGTCGGCGATGCTGGCT
JMFN028N20+ GCTAGAAAGGAAAAACCGTCGAATCCAACACCTTTGATATCAACGTCGGCGATGCTGGCT
JMFN031L06+ GCTAGAAAGGAAAAACCGTCGAATCCAACACCTTTGATATCAACGTCGGCGATGCTGGCT
JMFN014O11+ GCTAGAAAGGAAAAACCGTCGAATCCAACACCTTTGATATCAACGTCGGCGATGCTGGCT
rJMSF003B11- GCTAGAAAGGAAAAACCGTCGAATCCAACACCTTTGATATCAACGTCGGCGATGCTGGCT
JMSF003B11+ TCGGCGATGCTGGCT
____________________________________________________________
consensus GCTAGAAAGGAAAAACCGTCGAATCCAACACCTTTGATATCAACGTCGGCGATGCTGGCT
. : . : . : . : . : . :
JMFN015L08+ TCCGGTTTCTCCATCTCCGCCAGCTTTTCTCCCACGAAATTCTTAGCCTTGTCCACCAG
JMFN028N20+ TCCGGTTTCTCCGTCTCCGCCAGCTTTTCTCCCACGAAATTCTTAGCCTTGTCCACCAGA
JMFN031L06+ TCCGGTTTCTCCATCTCCGCCAGCTTTTCTCCCACGAAATTCTTAGCCTTGTCCACCAGA
JMFN014O11+ TCCGGTTTCTCCATCTCCGCCAGCTTTTCTCCCACGAAATTCTTAGCCTTGTCCACCAGA
rJMSF003B11- TCCGGTTTCTCCATCTCCGCCAGCTTTTCTCCCACGAAATTCTTAGCCTTGTCCACCAGA
JMSF003B11+ TCCGGTTTCTCCATCTCCGCCAGCTTTTCTCCCACGAAATTCTTAGCCTTGTCCACCAGA
____________________________________________________________
consensus TCCGGTTTCTCCATCTCCGCCAGCTTTTCTCCCACGAAATTCTTAGCCTTGTCCACCAGA
. : . : . : . : . : . :
JMFN028N20+ TCCATTTCTCAAGCTCGAAACTGAAACTAGAAGATCTGTATTTTGTCTCTTTATGCACGT
JMFN031L06+ TCCATTTCTCAAGCTCGAAACTGAAACTAGAAGATCTGTATTTTGTCTCTTTATGCACGT
JMFN014O11+ TCCATTTCTCAAGCTCGAAACT-ATACTAGAAGATCTGTATTTTGTCTCTTTATGCACGT
rJMSF003B11- TCCATTTCTCAAGCTCGAAACTGAAACTAGAAGATCTGTATTTTGTCTCTTTATGCACGT
JMSF003B11+ TCCATTTCTCAAGCTCGAAACTGAAACTAGAAGATCTGTATTTTGTCTCTTTATGCACGT
____________________________________________________________
consensus TCCATTTCTCAAGCTCGAAACTGAAACTAGAAGATCTGTATTTTGTCTCTTTATGCACGT
. : . : . : . : . : . :
JMFN028N20+ ACGCTAATGTATTATGTATGTCA
JMFN031L06+ ACGCTAATGTATTATGTATGTCATGCAGTGTCACAAAC
JMFN014O11+ ACGCTAATGTATTATGTATGTCATGCAGTGTCACAAACACAGGGAGGGGA
rJMSF003B11- ACGCTAATGTATTATGTATGTCATGCAGTGTCACAAACACAGGGAGGGGACTTGTAAACC
JMSF003B11+ ACGCTAATGTATTATGTATGTCATGCAGTGTCACAAACACAGGGAGGGGACTTGTAAACC
____________________________________________________________
consensus ACGCTAATGTATTATGTATGTCATGCAGTGTCACAAACACAGGGAGGGGACTTGTAAACC