Contig 002049:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF002H08Sequence356002049 (3)ref|XP_009802572.1|1e-05PREDICTED: endoglucanase 24-like [Nicotiana sylvestris]686002886 (3)emb|CDO96993.1|4e-89unnamed protein product [Coffea canephora]
JMSF028G06Sequence679002049 (3)emb|CDO96993.1|6e-94unnamed protein product [Coffea canephora]759002886 (3)emb|CDO96993.1|2e-105unnamed protein product [Coffea canephora]
JMSF047N14Sequence680002049 (3)emb|CDO96993.1|1e-103unnamed protein product [Coffea canephora]767002886 (3)ref|XP_009631305.1|5e-108PREDICTED: endoglucanase 24-like [Nicotiana tomentosiformis]

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF047N14+ GCTCCCCGATAGGAA
                      ____________________________________________________________
consensus GCTCCCCGATAGGAA
 
. : . : . : . : . : . :
JMSF047N14+ TCTGCGAAACTGAACACCCGTGTTGCGGTTTGCAACAGAGTATCAGCATATCCGGAATCG
JMSF028G06+ AACAGAGTATCAGCATATCCGGAATCG
                      ____________________________________________________________
consensus TCTGCGAAACTGAACACCCGTGTTGCGGTTTGCAACAGAGTATCAGCATATCCGGAATCG
 
. : . : . : . : . : . :
JMSF047N14+ GAAGATCGGAATGCCATGGATGAAGCGGCCAAAGCAGCCGCTGTCTCTCCGGCGACGTCG
JMSF028G06+ GAAGATCGGAATGCCATGGATGAAGCGGCCAAAGCAGCCGCTGTCTCTCCGGCGACGTCG
                      ____________________________________________________________
consensus GAAGATCGGAATGCCATGGATGAAGCGGCCAAAGCAGCCGCTGTCTCTCCGGCGACGTCG
 
. : . : . : . : . : . :
JMSF047N14+ GATGCCGGATTCGGGGCATCCACGGCGTACACCGTCCGAGCTGTATCCATATCTTCCGGC
JMSF028G06+ GATGCCGGATTCGGGGCATCCACGGCGTACACCGTCCGAGCTGTATCCATATCTTCCGGC
                      ____________________________________________________________
consensus GATGCCGGATTCGGGGCATCCACGGCGTACACCGTCCGAGCTGTATCCATATCTTCCGGC
 
. : . : . : . : . : . :
JMSF047N14+ CTTTCCCAACAACTATGGTCCGATATGGGATCACCAACCTGAACGAAAATGCGGTTGGGT
JMSF028G06+ CTTTCCCAACAACTATGGTCCGATATGGGATCACCAACCTGAACGAAAATGCGGTTGGGT
                      ____________________________________________________________
consensus CTTTCCCAACAACTATGGTCCGATATGGGATCACCAACCTGAACGAAAATGCGGTTGGGT
 
. : . : . : . : . : . :
JMSF047N14+ TGGGAAACAGTTTTGAGGAGATAATCGGTGGCCCATTTAATGGCGACCAACGTATTCTGC
JMSF028G06+ TGGGAAACAGTTTTGAGGAGATAATCGGTGGCCCATTTAATGGCGACCAACGTATTCTGC
                      ____________________________________________________________
consensus TGGGAAACAGTTTTGAGGAGATAATCGGTGGCCCATTTAATGGCGACCAACGTATTCTGC
 
. : . : . : . : . : . :
JMSF047N14+ AACTCCGACGCCGGCATGTACTGACCAAATTCGATCACGCTCCACGCGAGCATTGTGGTG
JMSF028G06+ AACTCCGACGCCGGCATGTACTGACCAAATTCGATCACGCTCCACGCGAGCATTGTGGTG
                      ____________________________________________________________
consensus AACTCCGACGCCGGCATGTACTGACCAAATTCGATCACGCTCCACGCGAGCATTGTGGTG
 
. : . : . : . : . : . :
JMSF047N14+ GTGAAGGCCATCGGGAAACCAAACTTGACGTTATCGCCGGCGTCGTAGTAGCCGCCGGTG
JMSF028G06+ GTGAAGGCCATCGGGAAACCAAACTTGACGTTATCGCCGGCGTCGTAGTAGCCGCCGGTG
                      ____________________________________________________________
consensus GTGAAGGCCATCGGGAAACCAAACTTGACGTTATCGCCGGCGTCGTAGTAGCCGCCGGTG
 
. : . : . : . : . : . :
JMSF047N14+ AGGTCTGTGTTGAACGACCACCCATCGCCCAGCCCGGAATGCCCCCGCCAGGTCATCCTC
JMSF028G06+ AGGTCTGTGTTGAACGACCACCCATCGCCCAGCCCGGAATGCCCCCGCCAGGTCATCCTC
                      ____________________________________________________________
consensus AGGTCTGTGTTGAACGACCACCCATCGCCCAGCCCGGAATGCCCCCGCCAGGTCATCCTC
 
. : . : . : . : . : . :
JMSF047N14+ TGCTCCGACGGCAAGTAGCCGGAACGCTGACCCTCGAAGAACAGTATGCACTTGGACAAT
JMSF028G06+ TGCTCCGACGGCAAGTAGCCGGAACGCTGACCCTCGAAGAACAGTATGCACTTGGACAAT
JMSF002H08+ CCGACGGCAAGTAGCCGGAACGCTGACCCTCGAAGAACAGTATGCACTTGGACAAT
                      ____________________________________________________________
consensus TGCTCCGACGGCAAGTAGCCGGAACGCTGACCCTCGAAGAACAGTATGCACTTGGACAAT
 
. : . : . : . : . : . :
JMSF047N14+ GCGTCGGGGTAGTTATGGTAACTGGATTGCGTAACGTCGAGAAGCAAAGTTGTGAAGAAG
JMSF028G06+ GCGTCGGGGTAGTTATGGTAACTGGATTGCGTAACGTCGAGAAGCAAAGTTGTGAAGAAG
JMSF002H08+ GCGTCGGGGTAGTTATGGTAACTGGATTGCGTAACGTCGAGAAGCAAAGTTGTGAAGAAG
                      ____________________________________________________________
consensus GCGTCGGGGTAGTTATGGTAACTGGATTGCGTAACGTCGAGAAGCAAAGTTGTGAAGAAG
 
. : . : . : . : . : . :
JMSF047N14+ AAAAGAATGAGAAAACGAAAAGACATAATTAGCTTCATCGCTGGGTGATTGGGCGGGTAG
JMSF028G06+ AAAAGAATGAGAAAACGAAAAGACATAATTAGCTTCATCGCTGGGTGATTGGGCGGGTAG
JMSF002H08+ AAAAGAATGAGAAAACGAAAAGACATAATTAGCTTCATCGCTGGGTGATTGGGCGGGTAG
                      ____________________________________________________________
consensus AAAAGAATGAGAAAACGAAAAGACATAATTAGCTTCATCGCTGGGTGATTGGGCGGGTAG
 
. : . : . : . : . : . :
JMSF047N14+ CG
JMSF028G06+ CGATGAGCTATAGCGGTGAGTATACTATATATCAAGGATATAGTGAAAAC
JMSF002H08+ CGATGAGCTATAGCGGTGAGTATACTATATATCAAGGATATAGTGAAAACTGTTTTCTTT
                      ____________________________________________________________
consensus CGATGAGCTATAGCGGTGAGTATACTATATATCAAGGATATAGTGAAAACTGTTTTCTTT
 
. : . : . : . : . : . :
JMSF002H08+ TAATTTTTAATTGGTTATGTTTATGTGGAGATATGAAAGGTTTCACGGGAGAGAGGAGAC
                      ____________________________________________________________
consensus TAATTTTTAATTGGTTATGTTTATGTGGAGATATGAAAGGTTTCACGGGAGAGAGGAGAC
 
. : . : . : . : . : . :
JMSF002H08+ ACGAGAGGGGATAGGGAGAGGGAGCGAATAATCGCCGACACGCGAGTCAGTTAAAATTCC
                      ____________________________________________________________
consensus ACGAGAGGGGATAGGGAGAGGGAGCGAATAATCGCCGACACGCGAGTCAGTTAAAATTCC