Contig 002048:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF002F17Sequence389002048 (2)759005594 (2)gb|KDO67501.1|3e-11hypothetical protein CISIN_1g000482mg [Citrus sinensis]
JMSF004E17Sequence380002048 (2)360013221 (23)gb|KDO39793.1|2e-47hypothetical protein CISIN_1g024368mg [Citrus sinensis]

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF002F17+ ATCAAGAAGCTCGAAGAACGAAGAAGGTA
                      ____________________________________________________________
consensus ATCAAGAAGCTCGAAGAACGAAGAAGGTA
 
. : . : . : . : . : . :
JMSF002F17+ CTATTGCCTTGCCGCTACACCGCCGCCGCTTGTTGTAGTTAAGACNTGTNTGAAGAGCNG
                      ____________________________________________________________
consensus CTATTGCCTTGCCGCTACACCGCCGCCGCTTGTTGTAGTTAAGACNTGTNTGAAGAGCNG
 
. : . : . : . : . : . :
JMSF004E17+ CCTAAAATGAGTAG
JMSF002F17+ AATTGAAGATGGAGGCCGGAAGAGTAGATCGTGATATTTATTAACGCCTAAAATGAGTAG
                      ____________________________________________________________
consensus AATTGAAGATGGAGGCCGGAAGAGTAGATCGTGATATTTATTAACGCCTAAAATGAGTAG
 
. : . : . : . : . : . :
JMSF004E17+ ATTTTCCCNGTCAACGGAGATNTGTTAAGAGCTTCCCTATTTGAGCTGAAACCNTTGGAT
JMSF002F17+ ATTTTCCCNGTCAACGGAGATNTGTTAAGAGCTTCCCTATTTGAGCTGAAACCNTTGGAT
                      ____________________________________________________________
consensus ATTTTCCCNGTCAACGGAGATNTGTTAAGAGCTTCCCTATTTGAGCTGAAACCNTTGGAT
 
. : . : . : . : . : . :
JMSF004E17+ ATAGGCCGGCCGGCNTGAGCNGGTTGAAGAGAGGTTTAATAGATCTTGGACTACTGAACG
JMSF002F17+ ATAGGCCGGCCGGCNTGAGCNGGTTGAAGAGAGGTTTAATAGATNTTGGACTACTGAACG
                      ____________________________________________________________
consensus ATAGGCCGGCCGGCNTGAGCNGGTTGAAGAGAGGTTTAATAGATCTTGGACTACTGAACG
 
. : . : . : . : . : . :
JMSF004E17+ CATCCAGATCCGGGNTGCGGTNTTCATTTGAGAGAGGGCCGTCAGTTCGCTCNTGNTTCT
JMSF002F17+ CATCCAGATCCGGGNTGCGGTNTTCATTTGAGAGAGGGCCGTCAGTTCGCTCNTGCTTCT
                      ____________________________________________________________
consensus CATCCAGATCCGGGNTGCGGTNTTCATTTGAGAGAGGGCCGTCAGTTCGCTCNTGCTTCT
 
. : . : . : . : . : . :
JMSF004E17+ TTATTTTCATTTTTTTTTTTGTGTTGAAATCAGTTTGGTTGATGCCGCCGATGCATC
JMSF002F17+ TTATTTTCATTTTTTTTTTTGTGTTGAAATCAGTTTGGTTGATGCCGCCGATGCATCATG
                      ____________________________________________________________
consensus TTATTTTCATTTTTTTTTTTGTGTTGAAATCAGTTTGGTTGATGCCGCCGATGCATCATG