Contig 002038:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF015N08Sequence528002038 (6)ref|XP_011081024.1|3e-39PREDICTED: probable NOT transcription complex subunit VIP2 isoform X2 [Sesamum 678004223 (7)ref|XP_011081024.1|3e-77PREDICTED: probable NOT transcription complex subunit VIP2 isoform X2 [Sesamum
JMFF025A02Sequence537002038 (6)ref|XP_011081024.1|5e-35PREDICTED: probable NOT transcription complex subunit VIP2 isoform X2 [Sesamum 754004223 (7)ref|XP_011081022.1|5e-106PREDICTED: probable NOT transcription complex subunit VIP2 isoform X1 [Sesamum
JMSF001F16Sequence242002038 (6)657004223 (7)ref|XP_011081024.1|6e-97PREDICTED: probable NOT transcription complex subunit VIP2 isoform X2 [Sesamum
JMSF011O17Sequence298002038 (6)ref|XP_011081024.1|5e-08PREDICTED: probable NOT transcription complex subunit VIP2 isoform X2 [Sesamum 659004223 (7)ref|XP_011081024.1|6e-87PREDICTED: probable NOT transcription complex subunit VIP2 isoform X2 [Sesamum
JMSF014H18Sequence470002038 (6)ref|XP_011081024.1|3e-24PREDICTED: probable NOT transcription complex subunit VIP2 isoform X2 [Sesamum 805004223 (7)ref|XP_011081022.1|6e-100PREDICTED: probable NOT transcription complex subunit VIP2 isoform X1 [Sesamum
JMSF035M01Sequence630002038 (6)ref|XP_011081024.1|2e-41PREDICTED: probable NOT transcription complex subunit VIP2 isoform X2 [Sesamum 687004223 (7)ref|XP_011081022.1|9e-98PREDICTED: probable NOT transcription complex subunit VIP2 isoform X1 [Sesamum

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF035M01+ CATCGGCACTTAGACCCCTACCAATATTGCTCC
                      ____________________________________________________________
consensus CATCGGCACTTAGACCCCTACCAATATTGCTCC
 
. : . : . : . : . : . :
JMFF015N08+ CTCCTATGTTAGTTGCCCCTGAAT
JMSF035M01+ CACTAACAATATTAGTCATTGAATTTCCAATTCTTCCTCCTATGTTAGTTGCCCCTGAAT
                      ____________________________________________________________
consensus CACTAACAATATTAGTCATTGAATTTCCAATTCTTCCTCCTATGTTAGTTGCCCCTGAAT
 
. : . : . : . : . : . :
JMFF015N08+ GTCCATGAGAGCTTGCAAGCGATAACTGAGAAAGCACAGTTGGAATGTTATTTATTGAAA
JMSF035M01+ GTCCATGAGAGCTTGCAAGCGATAACTGAGAAAGCACAGTTGGAATGTTATTTATTGAAA
JMFF025A02+ TCCATGAGAGCTTGCAAGCGATAACTGAGAAAGCACAGTTGGAATGTTATTTATTGAAA
                      ____________________________________________________________
consensus GTCCATGAGAGCTTGCAAGCGATAACTGAGAAAGCACAGTTGGAATGTTATTTATTGAAA
 
. : . : . : . : . : . :
JMFF015N08+ ATCTCCCATTAGAAACATTTCCTGCTTGTTGAACACTGCCAGAAGGACCACCAGTCATAG
JMSF035M01+ ATCTCCCATTAGAAACATTTCCTGCTTGTTGAACACTGCCAGAAGGACCACCAGTCATAG
JMSF014H18+ ATTAGAAACATTTCCTGCTTGTTGAACACTGCCAGAAGGACCACCAGTCATAG
JMFF025A02+ ATCTCCCATTAGAAACATTTCCTGCTTGTTGAACACTGCCAGAAGGACCACCAGTCATAG
                      ____________________________________________________________
consensus ATCTCCCATTAGAAACATTTCCTGCTTGTTGAACACTGCCAGAAGGACCACCAGTCATAG
 
. : . : . : . : . : . :
JMFF015N08+ CTGAATTTCTTGATGCAAATGTACCATGCACATTTGACATATTGAAATTCCCATGAATGC
JMSF035M01+ CTGAATTTCTTGATGCAAATGTACCATGCACATTTGACATATTGAAATTCCCATGAATGC
JMSF014H18+ CTGAATTTCTTGATGCAAATGTACCATGCACATTTGACATATTGAAATTCCCATGAATGC
JMFF025A02+ CTGAATTTCTTGATGCAAATGTACCATGCACATTTGACATATTGAAATTCCCATGAATGC
                      ____________________________________________________________
consensus CTGAATTTCTTGATGCAAATGTACCATGCACATTTGACATATTGAAATTCCCATGAATGC
 
. : . : . : . : . : . :
JMFF015N08+ CCTGCAGGCTTTGCACTGTTCCACCAGAGTGATTCAATACAGTGGCAGTGGAACCTGACT
JMSF035M01+ CCTGCAGGCTTTGCACTGTTCCACCAGAGTGATTCAATACAGTGGCAGTGGAACCTGACT
JMSF014H18+ CCTGCAGGCTTTGCACTGTTCCACCAGAGTGATTCAATACAGTGGCAGTGGAACCTGACT
JMSF011O17+ GTGATTCAATACAGTGGCAGTGGAACCTGACT
JMFF025A02+ CCTGCAGGCTTTGCACTGTTCCACCAGAGTGATTCAATACAGTGGCAGTGGAACCTGACT
                      ____________________________________________________________
consensus CCTGCAGGCTTTGCACTGTTCCACCAGAGTGATTCAATACAGTGGCAGTGGAACCTGACT
 
. : . : . : . : . : . :
JMFF015N08+ GTGCTGAAAATGAAGTGGCCAAAGCTCTAGCAGTGGTTTCTGGAAGGTTTGAAGCTGATC
JMSF035M01+ GTGCTGAAAATGAAGTGGCCAAAGCTCTAGCAGTGGTTTCTGGAAGGTTTGAAGCTGATC
JMSF014H18+ GTGCTGAAAATGAAGTGGCCAAAGCTCTAGCAGTGGTTTCTGGAAGGTTTGAAGCTGATC
JMSF011O17+ GTGCTGAAAATGAAGTGGCCAAAGCTCTAGCAGTGGTTTCTGGAAGGTTTGAAGCTGATC
JMFF025A02+ GTGCTGAAAATGAAGTGGCCAAAGCTCTAGCAGTGGTTTCTGGAAGGTTTGAAGCTGATC
                      ____________________________________________________________
consensus GTGCTGAAAATGAAGTGGCCAAAGCTCTAGCAGTGGTTTCTGGAAGGTTTGAAGCTGATC
 
. : . : . : . : . : . :
JMFF015N08+ CATTCAATCCCGAATTTAGTAGCCCTGACATTGCAGAATATGATTGAATACTCAAAACAA
JMSF035M01+ CATTCAATCCCGAATTTAGTAGCCCTGACATTGCAGAATATGATTGAATACTCAAAACAA
JMSF014H18+ CATTCAATCCCGAATTTAGTAGCCCTGACATTGCAGAATATGATTGAATACTCAAAACAA
JMSF011O17+ CATTCAATCCCGAATTTAGTAGCCCTGACATTGCAGAATATGATTGAATACTCAAAACAA
JMFF025A02+ CATTCAATCCCGAATTTAGTAGCCCTGACATTGCAGAATATGATTGAATACTCAAAACAA
                      ____________________________________________________________
consensus CATTCAATCCCGAATTTAGTAGCCCTGACATTGCAGAATATGATTGAATACTCAAAACAA
 
. : . : . : . : . : . :
JMFF015N08+ ACTGCAATGAATCATTCCCTGCCCAAAGCAAGCTCTTGTTGATCTTGATAGAAGCCAGCA
JMSF035M01+ ACTGCAATGAATCATTCCCTGCCCAAAGCAAGCTCTTGTTGATCTTGATAGAAGCCAGCA
JMSF014H18+ ACTGCAATGAATCATTCCCTGCCCAAAGCAAGCTCTTGTTGATCTCGATAGAAGCCAGCA
JMSF011O17+ ACTGCAATGAATCATTCCCTGCCCAAAGCAAGCTCTTGTTGATCTTGATAGAAGCCAGCA
JMFF025A02+ ACTGCAATGAATCATTCCCTGCCCAAAGCAAGCTCTTGTTGATCTTGATAGAAGCCAGCA
                      ____________________________________________________________
consensus ACTGCAATGAATCATTCCCTGCCCAAAGCAAGCTCTTGTTGATCTTGATAGAAGCCAGCA
 
. : . : . : . : . : . :
JMFF015N08+ AGGAGAAGTTCCC
JMSF035M01+ AGGAGAAGTTCCCTTTGAGACTCTTAGAAATAGAAAGTGCAGAGACCAGAGAGTGATGTT
JMSF014H18+ AGGAGAAGTTCCCTTTGAGACTCTTAGAAATAGAAAGTGCAGAGACCAGAGAGTGATGTT
JMSF011O17+ AGGAGAAGTTCCC
JMFF025A02+ AGGAGAAGTTCCCTTTGAGACTCTTAGAAATAGAAAGTGCAGAGACCAGAGAGTGATGTT
JMSF001F16+ CCTTTGAGACTCTTAGAAATAGAAAGTGCAGAGACCAGAGAGTGATGTT
                      ____________________________________________________________
consensus AGGAGAAGTTCCCTTTGAGACTCTTAGAAATAGAAAGTGCAGAGACCAGAGAGTGATGTT
 
. : . : . : . : . : . :
JMSF035M01+ TGAATGCGGGGGTCCGCCAAGCCGATGATAATGGTTATGTAGCTTTCGATTCGA
JMSF014H18+ TGAATGCGGGGGTCCGCCAAGCCGATGATAATGGTTATGTAGCTTTCGATTCGA
JMFF025A02+ TGAATGCGGGGGTCCGCCAAGCCGATGATAATGGTTATGTAGCTTTCGATTCGA
JMSF001F16+ TGAATGCGGGGGTCCGCCAAGCCGATGATAATGGTTATGTAGCTTTCGATTCGACCCCCC
                      ____________________________________________________________
consensus TGAATGCGGGGGTCCGCCAAGCCGATGATAATGGTTATGTAGCTTTCGATTCGACCCCCC