Contig 002037:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF001E20Sequence442002037 (3)ref|XP_011098219.1|6e-08PREDICTED: polynucleotide 3'-phosphatase ZDP [Sesamum indicum]722013922 (3)ref|XP_011098219.1|2e-111PREDICTED: polynucleotide 3'-phosphatase ZDP [Sesamum indicum]
JMSF003I15Sequence313002037 (3)ref|XP_011098219.1|7e-09PREDICTED: polynucleotide 3'-phosphatase ZDP [Sesamum indicum]782013922 (3)ref|XP_011098219.1|3e-92PREDICTED: polynucleotide 3'-phosphatase ZDP [Sesamum indicum]
JMSF015C06Sequence427002037 (3)ref|XP_011098219.1|9e-15PREDICTED: polynucleotide 3'-phosphatase ZDP [Sesamum indicum]783013922 (3)ref|XP_011098219.1|7e-94PREDICTED: polynucleotide 3'-phosphatase ZDP [Sesamum indicum]

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF015C06+ ACCTCTGTTATCATTCTCTTTCTGCTTTCTTTCTTGGCACTTTCATCTTTGTCT
                      ____________________________________________________________
consensus ACCTCTGTTATCATTCTCTTTCTGCTTTCTTTCTTGGCACTTTCATCTTTGTCT
 
. : . : . : . : . : . :
JMSF015C06+ GAAACCTCCTGTTTATCCACAGTAGCTTCACTAATAAATTTCGTCAAATCCTCTTGATCA
JMSF001E20+ TTTCGTCAAATCCTCTTGATCA
                      ____________________________________________________________
consensus GAAACCTCCTGTTTATCCACAGTAGCTTCACTAATAAATTTCGTCAAATCCTCTTGATCA
 
. : . : . : . : . : . :
JMSF015C06+ CTGCTCTTAAGAGACGAGAATCCGGAGATGGCACTGGCAGAGGGAATGGGGTCGGAGCTT
JMSF003I15+ TAAGAGACGAGAATCCGGAGATGGCACTGGCAGAGGGAATGGGGTCGGAGCTT
JMSF001E20+ CTGCTCTTAAGAGACGAGANTCCGGAGATGGCACTGGCAGAGGGAATGGGGTCGGAGCTT
                      ____________________________________________________________
consensus CTGCTCTTAAGAGACGAGAATCCGGAGATGGCACTGGCAGAGGGAATGGGGTCGGAGCTT
 
. : . : . : . : . : . :
JMSF015C06+ AAGGGAAAACATTCCATGTGATGCCACTTTGTCATATTGAAGCCTTGCGGGGCTTTACTT
JMSF003I15+ AAGGGAAAACATTCCATGTGATGCCACTTTGTCATATTGAAGCCTTGCGGGGCTTTACTT
JMSF001E20+ AAGGGAAAACATTCCATGTGATGCCACTTTGTCATATTGAAGCCTTGCGGGGCTTTACTT
                      ____________________________________________________________
consensus AAGGGAAAACATTCCATGTGATGCCACTTTGTCATATTGAAGCCTTGCGGGGCTTTACTT
 
. : . : . : . : . : . :
JMSF015C06+ ACCAGGCCCAGCCGGAGAGAGCTCGCTGCGATCGCCTTTGAGCATTTCTTGCAGGACGAC
JMSF003I15+ ACCAGGCCCAGCCGGAGAGAGCTCGCTGCGATCGCCTTTGAGCATTTCTTGCAGGACGAC
JMSF001E20+ ACCAGGCCCAGCCGGAGAGAGCTCGCTGCGATCGCCTTTGAGCATTTCTTGCAGGACGAC
                      ____________________________________________________________
consensus ACCAGGCCCAGCCGGAGAGAGCTCGCTGCGATCGCCTTTGAGCATTTCTTGCAGGACGAC
 
. : . : . : . : . : . :
JMSF015C06+ TTGCTGGACTTGGCATATTCTGCCACCACTTTCGCCGGCGTAGCCATTGAGGATGAAGAG
JMSF003I15+ TTGCTGGACTTGGCATATTCTGCCACCACTTTCGCCGGCGTAGCCATTGAGGATGAAGAG
JMSF001E20+ TTGCTGGACTTGGCATATTCTGCCACCACTTTCGCCGGCGTAGCCATTGAGGATGAAGAG
                      ____________________________________________________________
consensus TTGCTGGACTTGGCATATTCTGCCACCACTTTCGCCGGCGTAGCCATTGAGGATGAAGAG
 
. : . : . : . : . : . :
JMSF015C06+ AAGGAGAGTAGTAGGGGCAATACACTAGGGTTCAGACTAATCGGGGAACAGCTTGAGATT
JMSF003I15+ AAGGAGAGTAGTAGGGGCAATACACTAGGGTTCAGACTAATCGGGGAACAGCTTGAGATT
JMSF001E20+ AAGGAGAGTAGTAGGGGCAATACACTAGGGTTCAGACTAATCGGGGAACAGCTTGAGATT
                      ____________________________________________________________
consensus AAGGAGAGTAGTAGGGGCAATACACTAGGGTTCAGACTAATCGGGGAACAGCTTGAGATT
 
. : . : . : . : . : . :
JMSF015C06+ GTTAGGGTTCGC
JMSF003I15+ GTTAGGGTTCGC
JMSF001E20+ GTTAGGGTTCGCAGCATCAAGAGAGTGACGGGGATTTTGTGCTTTTGTAGAGTACCGAGA
                      ____________________________________________________________
consensus GTTAGGGTTCGCAGCATCAAGAGAGTGACGGGGATTTTGTGCTTTTGTAGAGTACCGAGA
 
. : . : . : . : . : . :
JMSF001E20+ GAAAAGGGGGTTTCCCGCCAATTTAGCGGTGGAGGTGTAGGCGGCGGAGTGGTGGAGCTC
                      ____________________________________________________________
consensus GAAAAGGGGGTTTCCCGCCAATTTAGCGGTGGAGGTGTAGGCGGCGGAGTGGTGGAGCTC