Contig 002032:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF003L18Sequence595002032 (3)emb|CBI40058.3|8e-15unnamed protein product [Vitis vinifera]
JMFS166C01Sequence627002032 (3)ref|XP_011098853.1|5e-19PREDICTED: probable inactive leucine-rich repeat receptor-like protein kinase A
JMSF031G16Sequence655002032 (3)emb|CBI40058.3|3e-40unnamed protein product [Vitis vinifera]768002905 (3)

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF031G16+ CATTACCTCAAGTGATGC
                      ____________________________________________________________
consensus CATTACCTCAAGTGATGC
 
. : . : . : . : . : . :
JMSF031G16+ AAGCCTATGAATTTTATCAGGAAGAGGTCCCCAAATACCCAGAGACACCAAGCTAAGAAC
                      ____________________________________________________________
consensus AAGCCTATGAATTTTATCAGGAAGAGGTCCCCAAATACCCAGAGACACCAAGCTAAGAAC
 
. : . : . : . : . : . :
JMSF031G16+ CCTTAAGGTAGTTAGTCTAGTGAGAGTAACAACAAAAGAATCTATGGAGAAATGGTGAGA
                      ____________________________________________________________
consensus CCTTAAGGTAGTTAGTCTAGTGAGAGTAACAACAAAAGAATCTATGGAGAAATGGTGAGA
 
. : . : . : . : . : . :
JMSF031G16+ TAAGGTCTGGTTTGGAACTGCAAATCCATTGAACTCACTAACCTTGACTGGCTTATCTCC
JMFF003L18+ CTCC
JMFS166C01+ CTCACTAACCTTGACTGGCTTATCTCC
                      ____________________________________________________________
consensus TAAGGTCTGGTTTGGAACTGCAAATCCATTGAACTCACTAACCTTGACTGGCTTATCTCC
 
. : . : . : . : . : . :
JMSF031G16+ AATAATCCTGAGCTCAGTAATTGAGTCTCCTTCACATGCAATGCTCATATGTGGTGATGA
JMFF003L18+ AATAATCCTGAGCTCAGTAATTGAGTCTCCTTCACATGCAATGCTCATATGTGGTGATGA
JMFS166C01+ AATAATCCTGAGCTCAGTAATTGAGTCTCCTTCACATGCAATGCTCATATGTGGTGATGA
                      ____________________________________________________________
consensus AATAATCCTGAGCTCAGTAATTGAGTCTCCTTCACATGCAATGCTCATATGTGGTGATGA
 
. : . : . : . : . : . :
JMSF031G16+ AGGGTAGTTACACAAATCACCATTGTAAGTCTCCCAAACATCCAGCAACACTGGGTATTC
JMFF003L18+ AGGGTAGTTACACAAATCACCATTGTAAGTCTCCCAAACATCCAGCAACACTGGGTATTC
JMFS166C01+ AGGGTAGTTACACAAATCACCATTGTAAGTCTCCCAAACATCCAGCAACACTGGGTATTC
                      ____________________________________________________________
consensus AGGGTAGTTACACAAATCACCATTGTAAGTCTCCCAAACATCCAGCAACACTGGGTATTC
 
. : . : . : . : . : . :
JMSF031G16+ CAAATGCTTCCTTAACTGCAGAAGAAGTTGCCTATGATAAGACTGCAATTGATGAGTATT
JMFF003L18+ CAAATGCTTCCTTAACTGCAGAAGAAGTTGCCTATGATAAGACTGCAATTGATGAGTATT
JMFS166C01+ CAAATGCTTCCTTAACTGCAGAAGAAGTTGCCTATGATAAGACTGCAATTGATGAGTATT
                      ____________________________________________________________
consensus CAAATGCTTCCTTAACTGCAGAAGAAGTTGCCTATGATAAGACTGCAATTGATGAGTATT
 
. : . : . : . : . : . :
JMSF031G16+ TGAGATGAAGGAAGCCCAGAATATGAGCATAAGAAGAGCAGGTATCTTCAGAGATCCCAT
JMFF003L18+ TGAGATGAAGGAAGCCCAGAATATGAGCATAAGAAGAGCAGGTATCTTCAGAGATCCCAT
JMFS166C01+ TGAGATGAAGGAAGCCCAGAATATGAGCATAAGAAGAGCAGGTATCTTCAGAGATCCCAT
                      ____________________________________________________________
consensus TGAGATGAAGGAAGCCCAGAATATGAGCATAAGAAGAGCAGGTATCTTCAGAGATCCCAT
 
. : . : . : . : . : . :
JMSF031G16+ CTTAGCTGAAAACACAACACCCTAGGAAGTAGGAACAACTTATTTTATGCCAATCCTTTC
JMFF003L18+ CTTAGCTGAAAACACAACACCCTAGGAAGTAGGAACAACTTATTTTATGCCAATCCTTTC
JMFS166C01+ CTTAGCTGAAAACACAACACCCTAGGAAGTAGGAACAACTTATTTTATGCCAATCCTTTC
                      ____________________________________________________________
consensus CTTAGCTGAAAACACAACACCCTAGGAAGTAGGAACAACTTATTTTATGCCAATCCTTTC
 
. : . : . : . : . : . :
JMSF031G16+ ATGAGAATTAAAAGCAAACCCACCTAAAATTCTTCAAGAACTCAGCTAATGAGCTAAATT
JMFF003L18+ ATGAGAATTAAAAGCAAACCCACCTAAAATTCTTCAAGAACTCAGCTAATGAGCTAAATT
JMFS166C01+ ATGAGAATTAAAAGCAAACCCACCTAAAATTCTTCAAGAACTCAGCTAATGAGCTAAATT
                      ____________________________________________________________
consensus ATGAGAATTAAAAGCAAACCCACCTAAAATTCTTCAAGAACTCAGCTAATGAGCTAAATT
 
. : . : . : . : . : . :
JMSF031G16+ CTTGGTTATTCAAGAGGTGGAGTGAGCTCTAACAATCTGAGTGAAATTCAGAGAGCCCCA
JMFF003L18+ CTTGGTTATTCAAGAGGTGGAGTGAGCTCTAACAATCTGAGTGAAATTCAGAGAGCCCCA
JMFS166C01+ CTTGGTTATTCAAGAGGTGGAGTGAGCTCTAACAATCTGAGTGAAATTCAGAGAGCCCCA
                      ____________________________________________________________
consensus CTTGGTTATTCAAGAGGTGGAGTGAGCTCTAACAATCTGAGTGAAATTCAGAGAGCCCCA
 
. : . : . : . : . : . :
JMSF031G16+ AAGTGCATTAAAAATGTAGAGTGGTTGCGAGAAGCC
JMFF003L18+ AAGTGCATTAAAAATGTAGAGTGGTTGCGAGAAGCCATGAAAGAAATGCAGAGAGAAAAG
JMFS166C01+ AAGTGCATTAAAAATGTAGAGTGGTTGCGAGAAGCCATGAAAGAAATGCAGAGAGAAAAG
                      ____________________________________________________________
consensus AAGTGCATTAAAAATGTAGAGTGGTTGCGAGAAGCCATGAAAGAAATGCAGAGAGAAAAG
 
. : . : . : . : . : . :
JMFF003L18+ GTAAAATGTTGGCCAAAAGGAATGTCCTTTGTTTGTTTTGAAAGAAACAAATAAACAAAC
JMFS166C01+ GTAAAATGTTGGCCAAAAGGAATGTCCTTTGTTTGTTTTGAAAGAAACAAATAAACAAAC
                      ____________________________________________________________
consensus GTAAAATGTTGGCCAAAAGGAATGTCCTTTGTTTGTTTTGAAAGAAACAAATAAACAAAC
 
. : . : . : . : . : . :
JMFF003L18+ AGGGGAGAGTCGTTGGGAAGAGAGAAGAGGAGAGGTGGTTGAAGAAA
JMFS166C01+ AGGGGAGAGTCGTTGGGAAGAGAGAAGAGGAGAGGTGGTTGAAGAAAGAGTGGGGAGAAA
                      ____________________________________________________________
consensus AGGGGAGAGTCGTTGGGAAGAGAGAAGAGGAGAGGTGGTTGAAGAAAGAGTGGGGAGAAA