| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF006C17 | Sequence | 576 | 002027 (12) | ref|XP_007024078.1| | 2e-134 | Coatomer, beta' subunit isoform 6 [Theobroma cacao] gb|EOY26700.1| Coatomer, bet | 773 | 011734 (2) | ref|XP_007024077.1| | 9e-43 | Coatomer, beta' subunit isoform 5 [Theobroma cacao] gb|EOY26699.1| Coatomer, bet |
| JMFS021C04 | Sequence | 608 | 002027 (12) | gb|AAZ32864.1| | 2e-88 | coatomer protein complex subunit beta 2 [Medicago sativa] | |||||
| JMFS032C04 | Sequence | 524 | 002027 (12) | gb|AAZ32864.1| | 3e-73 | coatomer protein complex subunit beta 2 [Medicago sativa] | |||||
| JMFS084F02 | Sequence | 616 | 002027 (12) | gb|AAZ32864.1| | 1e-81 | coatomer protein complex subunit beta 2 [Medicago sativa] | |||||
| JMFS089E09 | Sequence | 620 | 002027 (12) | gb|AAZ32864.1| | 5e-83 | coatomer protein complex subunit beta 2 [Medicago sativa] | |||||
| JMFS104B05 | Sequence | 613 | 002027 (12) | gb|AAZ32864.1| | 1e-79 | coatomer protein complex subunit beta 2 [Medicago sativa] | |||||
| JMFS109A09 | Sequence | 626 | 002027 (12) | gb|AAZ32864.1| | 2e-88 | coatomer protein complex subunit beta 2 [Medicago sativa] | |||||
| JMFS110D05 | Sequence | 425 | 002027 (12) | ref|XP_009358199.1| | 5e-40 | PREDICTED: coatomer subunit beta'-2 isoform X1 [Pyrus x bretschneideri] ref|XP_0 | |||||
| JMFS116C11 | Sequence | 226 | 002027 (12) | ||||||||
| JMFS160D10 | Sequence | 618 | 002027 (12) | gb|AAZ32864.1| | 8e-64 | coatomer protein complex subunit beta 2 [Medicago sativa] | |||||
| JMFS160G10 | Sequence | 598 | 002027 (12) | ref|XP_007024078.1| | 4e-141 | Coatomer, beta' subunit isoform 6 [Theobroma cacao] gb|EOY26700.1| Coatomer, bet | |||||
| JMFS165F12 | Sequence | 598 | 002027 (12) | gb|AAZ32864.1| | 7e-81 | coatomer protein complex subunit beta 2 [Medicago sativa] | |||||
This contig is upended
. : . : . : . : . : . :
JMFF006C17+ TTGAAGCTTTCATGTAACCAACTGCCCAGACCCGCTCAAGGCCATAATT
____________________________________________________________
consensus TTGAAGCTTTCATGTAACCAACTGCCCAGACCCGCTCAAGGCCATAATT
. : . : . : . : . : . :
JMFF006C17+ CAAAGTGTTTTCAAGTCTATAAGTTGTTGCATGCCATATGCGAACAGTACCATCTTCAGA
JMFS160G10+ A
____________________________________________________________
consensus CAAAGTGTTTTCAAGTCTATAAGTTGTTGCATGCCATATGCGAACAGTACCATCTTCAGA
. : . : . : . : . : . :
JMFF006C17+ ACCCGTGATTATAATAGGCAGTTCAGGATGAAAACACACAGCAGAGACATTATGTGTGTG
JMFS160G10+ ACCCGTGATTATAATAGGCAGTTCAGGATGAAAACACACAGCAGAGACATTATGTGTGTG
____________________________________________________________
consensus ACCCGTGATTATAATAGGCAGTTCAGGATGAAAACACACAGCAGAGACATTATGTGTGTG
. : . : . : . : . : . :
JMFF006C17+ CCCTTCTAGAGTTTGCACACAACTTTTCGTCTGGTAGTCCCACACCTTTGCAGTGTGATC
JMFS160G10+ CCCTTCTAGAGTTTGCACACAACTTTTCGTCTGGTAGTCCCACACCTTTGCAGTGTGATC
____________________________________________________________
consensus CCCTTCTAGAGTTTGCACACAACTTTTCGTCTGGTAGTCCCACACCTTTGCAGTGTGATC
. : . : . : . : . : . :
JMFF006C17+ ATCAGACCCAGTGATTAAGTAAGGTTTATCACCACCTGTGAAATAATCTACACAATTCAC
JMFS160G10+ ATCAGACCCAGTGATTAAGTAAGGTTTATCACCACCTGTGAAATAATCTACACAATTCAC
____________________________________________________________
consensus ATCAGACCCAGTGATTAAGTAAGGTTTATCACCACCTGTGAAATAATCTACACAATTCAC
. : . : . : . : . : . :
JMFF006C17+ ACCTTTCAGATGGGCATCCAGCGTGAAGTTTGGATCAGGTGAGCCAAGATTCCAAATCTT
JMFS160G10+ ACCTTTCAGATGGGCATCCAGCGTGAAGTTTGGATCAGGTGAGCCAAGATTCCAAATCTT
____________________________________________________________
consensus ACCTTTCAGATGGGCATCCAGCGTGAAGTTTGGATCAGGTGAGCCAAGATTCCAAATCTT
. : . : . : . : . : . :
JMFF006C17+ TATAGTTCGATCAAGAGATGCACTAGCAAAAGTGTTGGTATCTTTTGGATTAAATGTCAC
JMFS160G10+ TATAGTTCGATCAAGAGATGCACTAGCAAAAGTGTTGGTATCTTTTGGATTAAATGTCAC
____________________________________________________________
consensus TATAGTTCGATCAAGAGATGCACTAGCAAAAGTGTTGGTATCTTTTGGATTAAATGTCAC
. : . : . : . : . : . :
JMFF006C17+ TTGCATCACATAATGGGAATGGCCCTCAAAAATTTGAGTGCACACCCATCCTTTCTCCCA
JMFS160G10+ TTGCATCACATAATGGGAATGGCCCTCAAAAATTTGAGTGCACACCCATCCTTTCTCCCA
JMFS021C04+ CACACCCATCCTTTCTCCCA
JMFS109A09+ CACACCCATCCTTTCTCCCA
JMFS089E09+ TCCCA
____________________________________________________________
consensus TTGCATCACATAATGGGAATGGCCCTCAAAAATTTGAGTGCACACCCATCCTTTCTCCCA
. : . : . : . : . : . :
JMFF006C17+ ATCCCAGAGCTTTATCAGCATGTCATCAGATGATGACAGCACATAAGGAAGAGTAGGATG
JMFS160G10+ ATCCCAGAGCTTTATCAGCATGTCATCAGATGATGACAGCACATAAGGAAGAGTAGGATG
JMFS021C04+ ATCCCAGAGCTTTATCAGCATGTCATCAGATGATGACAGCACATAAGGAAGAGTAGGATG
JMFS109A09+ ATCCCAGAGCTTTATCAGCATGTCATCAGATGATGNCAGCACATAAGGAAGAGTAGGATG
JMFS089E09+ ATCCCAGAGCTTANTCAGCATGTCATCAGATGATGACAGCACATAAGGAAGAGTAGGATG
JMFS032C04+ ATAAGGAAGAGTAGGATG
JMFS165F12+ AGCTTTATCAGCATGTCATCAGATGATGACAGCACATAAGGAAGAGTAGGATG
JMFS084F02+ GAGCTTTATCAGCATGTCATCAGATGATGACAGCACATAAGGAAGAGTAGGATG
JMFS104B05+ CAGCATGTCATCAGATGATGACAGCACATAAGGAAGAGTAGGATG
JMFS160D10+ ATAAGGAAGAGTAGGATG
____________________________________________________________
consensus ATCCCAGAGCTTTATCAGCATGTCATCAGATGATGACAGCACATAAGGAAGAGTAGGATG
. : . : . : . : . : . :
JMFF006C17+ AACAGCAACACA-CCTGATATAATCTGTGTGAGCTTCAAAGACTTTAA
JMFS160G10+ AACAGCAACACA-CCTGATATAATCTGTGTGAGCTTCAAAGACTTTAACCTTATCCATGG
JMFS021C04+ AACAGCAACACA-CCTGATATAATCTGTGTGAGCTTCAAAGACTTTAACCTTATCCATGG
JMFS109A09+ AACAGCAACACA-CCTGATATAATCTGTGTGAGCTTCAAAGACTTTAACCTTATCCATGG
JMFS089E09+ AACAGCAACACA-CCTGATATAATCTGTGTGAGCTTCAAAGACTTTAACCTTATCCATGG
JMFS032C04+ AACAGCAACACA-CCTGATATAATCTGTGTGAGCTTCAAAGACTTTAACCTTATCCATGG
JMFS165F12+ AACAGCAACACA-CCTGATATAATCTGTGTGAGCTTCAAAGACTTTAACCTTATCCATGG
JMFS084F02+ AACAGCAACACA-CCTGATATAATCTGTGTGAGCTTCAAAGACTTTAACCTTATCCATGG
JMFS104B05+ AACAGCAACACA-CCTGATATAATCTGTGTGAGCTTCAAAGACTTTAACCTTATCCATGG
JMFS160D10+ AACAGCAACACACCCTGATATAATCTGTGTGAGCTTCAAAGACTTTAACCTTATCCATGG
____________________________________________________________
consensus AACAGCAACACA-CCTGATATAATCTGTGTGAGCTTCAAAGACTTTAACCTTATCCATGG
. : . : . : . : . : . :
JMFS160G10+ TGTTGTAATTGTACACCCGAATAAACATGTCATCAGCACCAGCAACAACCCACTGCTTGC
JMFS021C04+ TGTTGTAATTGTACACCCGAATAAACATGTCATCAGCACCAGCAACAACCCACTGCTTGC
JMFS109A09+ TGTTGTAATTGTACACCCGAATAAACATGTCATCAGCACCAGCAACAACCCACTGCTTGC
JMFS089E09+ TGTTGTAATTGTACACCCGAATAAACATGTCATCAGCACCAGCAACAACCCACTGCTTGC
JMFS032C04+ TGTTGTAATTGTACACCCGAATAAACATGTCATCAGCACCAGCAACAACCCACTGCTTGC
JMFS165F12+ TGTTGTAATTGTACACCCGAATAAACATGTCATCAGCACCAGCAACAACCCACTGCTTGC
JMFS084F02+ TGTTGTAATTGTACACCCGAATAAACATGTCATCAGCACCAGCAACAACCCACTGCTTGC
JMFS104B05+ TGTTGTAATTGTACACCCGAATAAACATGTCATCAGCACCAGCAACAACCCACTGCTTGC
JMFS110D05+ CCCACTGCTTGC
JMFS160D10+ TGTTGTAATTGTACACCCGAATAAACATGTCATCAGCACCAGCAACAACCCACTGCTTGC
____________________________________________________________
consensus TGTTGTAATTGTACACCCGAATAAACATGTCATCAGCACCAGCAACAACCCACTGCTTGC
. : . : . : . : . : . :
JMFS160G10+ GTGCAATGAACTTTGCTGACCTAACTGGTAACTCAGTCACTTCAAAAGATTTTGCCAT
JMFS021C04+ GTGCAATGAACTTTGCTGACCTAACTGGTAACTCAGTCACTTCAAAAGATTTTGCCATTG
JMFS109A09+ GTGCAATGAACTTTGCTGACCTAACTGGTAACTCAGTCACTTCAAAAGATTTTGCCATTG
JMFS089E09+ GTGCAATGAACTTTGCTGACCTAACTGGTAACTCAGTCACTTCAAAAGATTTTGCCATTG
JMFS032C04+ GTGCAATGAACTTTGCTGACCTAACTGGTAACTCAGTCACTTCAAAAGATTTTGCCATTG
JMFS165F12+ GTGCAATGAACTTTGCTGACCTAACTGGTAACTCAGTCACTTCAAAAGATTTTGCCATTG
JMFS084F02+ GTGCAATGAACTTTGCTGACCTAACTGGTAACTCAGTCACTTCAAAAGATTTTGCCATTG
JMFS104B05+ GTGCAATGAACTTTGCTGACCTAACTGGTAACTCAGTCACTTCAAAAGATTTTGCCATTG
JMFS110D05+ GTGCAATGAACTTTGCTGACCTAACTGGTAACTCAGTCACTTCAAAAGATTTTGCCATTG
JMFS160D10+ GTGCAATGAACTTTGCTGACCTAACTGGTAACTCAGTCACTTCAAAAGATTTTGCCATTG
____________________________________________________________
consensus GTGCAATGAACTTTGCTGACCTAACTGGTAACTCAGTCACTTCAAAAGATTTTGCCATTG
. : . : . : . : . : . :
JMFS021C04+ CCTGTGTTTGGTAGTTCCAGATGCAAACAGTCCCAGAATACAAACTCGCTAGTATCCATG
JMFS109A09+ CCTGTGTTTGGTAGTTCCAGATGCAAACAGTCCCAGAATACAAACTCGCTAGTATCCATG
JMFS089E09+ CCTGTGTTTGGTAGTTCCAGATGCAAACAGTCCCAGAATACAAACTCGCTAGTATCCATG
JMFS032C04+ CCTGTGTTTGGTAGTTCCAGATGCAAACAGTCCCAGAATACAAACTCGCTAGTATCCATG
JMFS165F12+ CCTGTGTTTGGTAGTTCCAGATGCAAACAGTCCCAGAATACAAACTCGCTAGTATCCATG
JMFS084F02+ CCTGTGTTTGGTAGTTCCAGATGCAAACAGTCCCAGAATACAAACTTGCTAGTATCCATG
JMFS104B05+ CCTGTGTTTGGTAGTTCCAGATGCAAACAGTCCCAGAATACAAACTCGCTAGTATCCATG
JMFS110D05+ CCTGTGTTTGGTAGTTCCAGATGCAAACAGTCCCAGAATACAAACTCGCTAGTATCCATG
JMFS160D10+ CCTGTGTTTGGTAGTTCCAGATGCAAACAGTCCCAGAATACAAACTCGCTAGTATCCATG
____________________________________________________________
consensus CCTGTGTTTGGTAGTTCCAGATGCAAACAGTCCCAGAATACAAACTCGCTAGTATCCATG
. : . : . : . : . : . :
JMFS021C04+ GCTCGGTTGGATGCAGATCCACCGACTTTACTCTTTCCGATCTTTGAGCAACTTTTCTCT
JMFS109A09+ GCTCGGTTGGATGCAGATCCACCGACTTTACTCTTTCCGATCTTTGAGCAACTTTTCTCT
JMFS089E09+ GCTCGGTTGGATGCAGATCCACCGACTTTACTCTTTCCGATCTTTGAGCAACTTTTCTCT
JMFS032C04+ GCTCGGTTGGATGCAGATCCACCGACTTTACTCTTTCCGATCTTTGAGCAACTTTTCTCT
JMFS165F12+ GCTCGGTTGGATGCAGATCCACCGACTTTACTCTTTCCGATCTTTGAGCAACTTTTCTCT
JMFS084F02+ GCTCGGTTGGATGCAGATCCACCGACTTTACTCTTTCCGATCTTTGAGCAACTTTTCTCT
JMFS104B05+ GCTCGGTTGGATGCAGATCCACCGACTTTACTCTTTCCGATCTTTGAGCAACTTTTCTCT
JMFS110D05+ GCTCGGTTGGATGCAGATCCACCGACTTTACTCTTTCCGATCTTTGAGCAACTTTTCTCT
JMFS116C11+ ACTTTTCTCT
JMFS160D10+ GCTCGGTTGGATGCAGATCCACCGACTTTACTCTTTCCGATCTTTGAGCAACTTTTCTCT
____________________________________________________________
consensus GCTCGGTTGGATGCAGATCCACCGACTTTACTCTTTCCGATCTTTGAGCAACTTTTCTCT
. : . : . : . : . : . :
JMFS021C04+ TGATTTCCAACCTCAGAGGCATATTCACAGATGAAAGGGAAGCTACTTAGATTGAAGAAA
JMFS109A09+ TGATTTCCAACCTCAGAGGCATATTCACAGATGAAAGGGAAGCTACTTAGATTGAAGAAA
JMFS089E09+ TGATTTCCAACCTCAGAGGCATATTCACAGATGAAAGGGAAGCTACTTAGATTGAAGAAA
JMFS032C04+ TGATTTCCAACCTCAGAGGCATATTCACAGATGAAAGGGAAGCTACTTAGATTGAAGAAA
JMFS165F12+ TGATTTCCAACCTCAGAGGCATATTCACAGATGAAAGGGAAGCTACTTAGATTGAAGAAA
JMFS084F02+ TGATTTCCAACCTCAGAGGCATATTCACAGATGAAAGGGAAGCTACTTAGATTGAAGAAA
JMFS104B05+ TGATTTCCAACCTCAGAGGCATATTCACAGATGAAAGGGAAGCTACTTAGATTGAAGAAA
JMFS110D05+ TGATTTCCAACCTCAGAGGCATATTCACAGATGAAAGGGAAGCTACTTAGATTGAAGAAA
JMFS116C11+ TGATTTCCAACCTCAGAGGCATATTCACAGATGAAAGGGAAGCTACTTAGATTGAAGAAA
JMFS160D10+ TGATTTCCAACCTCAGAGGCATATTCACAGATGAAAGGGAAGCTACTTAGATTGAAGAAA
____________________________________________________________
consensus TGATTTCCAACCTCAGAGGCATATTCACAGATGAAAGGGAAGCTACTTAGATTGAAGAAA
. : . : . : . : . : . :
JMFS021C04+ CCAATCGGAGATTTGGAAAAATGAGCAGCCCTAGAGATCCAAGCAAAGATCACAGAGGAG
JMFS109A09+ CCAATCGGAGATTTGGAAAAATGAGCAGCCCTAGAGATCCAAGCAAAGATCACAGAGGAG
JMFS089E09+ CCAATCGGAGATTTGGAAAAATGAGCAGCCCTAGAGATCCAAGCAAAGATCACAGAGGAG
JMFS032C04+ CCAATCGGAGATTTGGAAAAATGAGCAGCCCTAGAGATCCAAGCAAAGATCACAGAGGAG
JMFS165F12+ CCAATCGGAGATTTGGAAAAATGAGCAGCCCTAGAGATCCAAGCAAAGATCACAGAGGAG
JMFS084F02+ CCAATCGGAGATTTGGAAAAATGAGCAGCCCTAGAGATCCAAGCAAAGATCACAGAGGAG
JMFS104B05+ CCAATCGGAGATTTGGAAAAATGAGCAGCCCTAGAGATCCAAGCAAAGATCACAGAGGAG
JMFS110D05+ CCAATCGGAGATTTGGAAAAATGAGCAGCCCTAGAGATCCAAGCAAAGATCACAGAGGAG
JMFS116C11+ CCAATCGGAGATTTGGAAAAATGAGCAGCCCTAGAGATCCAAGCAAAGATCACAGAGGAG
JMFS160D10+ CCAATCGGAGATTTGGAAAAATGAGCAGCCCTAGAGATCCAAGCAAAGATCACAGAGGAG
____________________________________________________________
consensus CCAATCGGAGATTTGGAAAAATGAGCAGCCCTAGAGATCCAAGCAAAGATCACAGAGGAG
. : . : . : . : . : . :
JMFS021C04+ CGAATCCACTGACGCGCGCGCGCGCAGTCGGGTGCGGAGATCTTCTTCGAATTGGAATTG
JMFS109A09+ CGAATCCACTGACGCGCGCGCGCGCAGTCGGGTGCGGAGATCTTCTTCGAATTGGAATTG
JMFS089E09+ CGAATCCACTGACGCGCGCGCGCGCAGTCGGGTGCGGAGATCTTCTTCGAATTGGAATTG
JMFS032C04+ CGAATCCACTGACGCGCGCGCGCGCAGTCGGGTGCGGAGATCTTCTTCGAATTGGAATTG
JMFS165F12+ CGAATCCACTGACGCGCGCGCGCGCAGTCGGGTGCGGAGATCTTCTTCGAATTGGAATTG
JMFS084F02+ CGAATCCACTGACGCGCGCGCGCGCAGTCGGGTGCGGAGATCTTCTTCGAATTGGAATTG
JMFS104B05+ CGAATCCACTGACGCGCGCGCGCGCAGTCGGGTGCGGAGATCTTCTTCGAATTGGAATTG
JMFS110D05+ CGAATCCACTGACGCGCGCGCGCGCAGTCGGGTGCGGAGATCTTCTTCGAATTGGAATTG
JMFS116C11+ CGAATCCACTGACGCGCGCGCGCGCAGTCGGGTGCGGAGATCTTCTTCGAATTGGAATTG
JMFS160D10+ CGAATCCACTGACGCGCGCGCGCGCAGTCGGGTGCGGAGATCTTCTTCGAATTGGAATTG
____________________________________________________________
consensus CGAATCCACTGACGCGCGCGCGCGCAGTCGGGTGCGGAGATCTTCTTCGAATTGGAATTG
. : . : . : . : . : . :
JMFS021C04+ CGGGCCGAGCGATGAAACTCTAATAGAGAAAGAGAGATCTCAGGAGAGA
JMFS109A09+ CGGGCCGAGCGATGAAACTCTAATAGAGAAAGAGAGATCTCAGGAGAGAGAAAGTGCAGA
JMFS089E09+ CGGGCCGAGCGATGAAACTCTAATAGAGAAAGAGAGATCTCAGGAGAGAGAAAGTGCAGA
JMFS032C04+ CGGGCCGAGCGATGAAACTCTAATAGA
JMFS165F12+ CGGGCCGAGCGATGAAACTCTAATAGAGAAAGAGAGATCTCAGGAGAGAGAAAGTGCAGA
JMFS084F02+ CGGGCCGAGCGATGAAACTCTAATAGAGAAAGAGAGATCTCAGGAGAGAGAAAGTGCAGA
JMFS104B05+ CGGGCCGAGCGATGAAACTCTAATAGAGAAAGAGAGATCTCAGGAGAGAGAAAGTGCAGA
JMFS110D05+ CGGGCCGAGCGATGAAACTCTAATAGAGAAAGAGAGATCTCAGGAGAGAGAAA
JMFS116C11+ CGGGCCGAGCGATGAAACTCTAATAGAGAAAGAGAG
JMFS160D10+ CGGGCCGAGCGATGAAACTCTAATAGAGAAAGAGAGATCTCAGGAGAGAGAAAGTGCAGA
____________________________________________________________
consensus CGGGCCGAGCGATGAAACTCTAATAGAGAAAGAGAGATCTCAGGAGAGAGAAAGTGCAGA
. : . : . : . : . : . :
JMFS109A09+ GATTGT
JMFS089E09+ GATTGTGCTCATGCCA
JMFS165F12+ GATTGT
JMFS084F02+ GATTGTGCTCATGCCA
JMFS104B05+ GATTGTGCTCATGCCACAGCTAA
JMFS160D10+ GATTGTGCTCATGCCACAGCTAAGTTTCCCTCTGTGATATGCGAGGAAGTGAGGGACGAA
____________________________________________________________
consensus GATTGTGCTCATGCCACAGCTAAGTTTCCCTCTGTGATATGCGAGGAAGTGAGGGACGAA