Contig 002004:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS140A03Sequence571002004 (2)ref|XP_011088079.1|2e-67PREDICTED: myosin-2 heavy chain [Sesamum indicum]
JMSF043J12Sequence775002004 (2)ref|XP_011088079.1|2e-88PREDICTED: myosin-2 heavy chain [Sesamum indicum]722023615ref|XP_004230689.1|4e-66PREDICTED: MAR-binding filament-like protein 1-1 isoform X1 [Solanum lycopersic

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF043J12+ GTCATGCAGGAGACACTCA
                      ____________________________________________________________
consensus GTCATGCAGGAGACACTCA
 
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JMSF043J12+ CATTTGTCTTCCAAGCACGTATCCTTAATATCATCCAAAGCATGTTGTCTAATGTCATAA
                      ____________________________________________________________
consensus CATTTGTCTTCCAAGCACGTATCCTTAATATCATCCAAAGCATGTTGTCTAATGTCATAA
 
. : . : . : . : . : . :
JMSF043J12+ AATTTATTAACAACCTCTCTGAAAACCTCCAGCTGCTTTGATTGCTTTTCTAGGTCACTC
                      ____________________________________________________________
consensus AATTTATTAACAACCTCTCTGAAAACCTCCAGCTGCTTTGATTGCTTTTCTAGGTCACTC
 
. : . : . : . : . : . :
JMSF043J12+ TGTAGAGTGGCAGTGAGTGCTTTTTCCTCAAGCAATTCACAGCTAATCTTTTCAAATCTT
                      ____________________________________________________________
consensus TGTAGAGTGGCAGTGAGTGCTTTTTCCTCAAGCAATTCACAGCTAATCTTTTCAAATCTT
 
. : . : . : . : . : . :
JMSF043J12+ TCCTGAAGTGGATAGAATTCTCTTGAATTAAACTCCTCCTGTTCCTTTGCTTTCTCAGCC
JMFS140A03+ TTCCTTTGCTTTCTCAGCC
                      ____________________________________________________________
consensus TCCTGAAGTGGATAGAATTCTCTTGAATTAAACTCCTCCTGTTCCTTTGCTTTCTCAGCC
 
. : . : . : . : . : . :
JMSF043J12+ TCCATTACAGCATTGTCCCGCTCAGCAAATGCAGAAGCAACACAACCCTGAAAGAACTTA
JMFS140A03+ TCCATTACAGCATTGTCCCGCTCAGCAAATGCAGAAGCAACACAACCCTGAAAGAACTTA
                      ____________________________________________________________
consensus TCCATTACAGCATTGTCCCGCTCAGCAAATGCAGAAGCAACACAACCCTGAAAGAACTTA
 
. : . : . : . : . : . :
JMSF043J12+ AGCTGTTTTTCTGCTTCAATGTTCTTGGAGACTTCTGCACTATGTAAATCTGCTAGCTGA
JMFS140A03+ AGCTGTTTTTCTGCTTCAATGTTCTTGGAGACTTCTGCACTATGTAAATCTGCTAGCTGA
                      ____________________________________________________________
consensus AGCTGTTTTTCTGCTTCAATGTTCTTGGAGACTTCTGCACTATGTAAATCTGCTAGCTGA
 
. : . : . : . : . : . :
JMSF043J12+ CTCTTGACATGATAGGCTTCTGAAAGCTCCTCTTGAAGATTTTGATTTTCTCTAGTGCAA
JMFS140A03+ CTCTTGACATGATAGGCTTCTGAAAGCTCCTCTTGAAGATTTTGATTTTCTCTAGTGCAA
                      ____________________________________________________________
consensus CTCTTGACATGATAGGCTTCTGAAAGCTCCTCTTGAAGATTTTGATTTTCTCTAGTGCAA
 
. : . : . : . : . : . :
JMSF043J12+ GCAGCTAACTTCTTTTTTAAGTTTTCAATCTCTTGCTCCAACGCAGCTGTCCTGTGAAGG
JMFS140A03+ GCAGCTAACTTCTTTTTTAAGTTTTCAATCTCTTGCTCCAACGCAGCTGTCCTGTGAAGG
                      ____________________________________________________________
consensus GCAGCTAACTTCTTTTTTAAGTTTTCAATCTCTTGCTCCAACGCAGCTGTCCTGTGAAGG
 
. : . : . : . : . : . :
JMSF043J12+ TGCATACGAGTAGCCACACCTAGATAGGCAGGTCCGGCTTGTTGCATGCATAGCTGTTCA
JMFS140A03+ TGCATACGAGTAGCCACACCTAGATAGGCAGGTCCGGCTTGTTGCATGCATAGCTGTTCA
                      ____________________________________________________________
consensus TGCATACGAGTAGCCACACCTAGATAGGCAGGTCCGGCTTGTTGCATGCATAGCTGTTCA
 
. : . : . : . : . : . :
JMSF043J12+ ATGTCTTTATGCAAGTCATCCCGCTCACGCTCCAACTGCTGAATACGAGCATGAAAGGCT
JMFS140A03+ ATGTCTTTATGCAAGTCATCCCGCTCACGCTCCAACTGCTGAATACGAGCATGAAAGGCT
                      ____________________________________________________________
consensus ATGTCTTTATGCAAGTCATCCCGCTCACGCTCCAACTGCTGAATACGAGCATGAAAGGCT
 
. : . : . : . : . : . :
JMSF043J12+ GTATTGTCTTCCAAATTTCCTTCCATAGCTGAAACTCTGGGAATGGTAGCAGAACGAAAA
JMFS140A03+ GTATTGTCTTCCAAATTTCCTTCCATAGCTGAAACTCTGGGAATGGTAGCAGAACGAAAA
                      ____________________________________________________________
consensus GTATTGTCTTCCAAATTTCCTTCCATAGCTGAAACTCTGGGAATGGTAGCAGAACGAAAA
 
. : . : . : . : . : . :
JMSF043J12+ TTCGGAAACGATGGGGCAGGAGAGGGGGTATTGATTGTGTGTAGTTAATCCCCTCCGCCC
JMFS140A03+ TTCGGAAACGATGGGGCAGGAGAGGGGGTATTGATTGTGTGTAGTTAATCCCCTCCGCCC
                      ____________________________________________________________
consensus TTCGGAAACGATGGGGCAGGAGAGGGGGTATTGATTGTGTGTAGTTAATCCCCTCCGCCC
 
. : . : . : . : . : . :
JMSF043J12+ AATGATTGCTTAAACCGGAAGAGCTGCTCTCTTCC
JMFS140A03+ AATGATTGCTTAAACCGGAAGAGCTGCTCTCTTCCTTCCCAAGTCTACTTTCCTGTCCCG
                      ____________________________________________________________
consensus AATGATTGCTTAAACCGGAAGAGCTGCTCTCTTCCTTCCCAAGTCTACTTTCCTGTCCCG