clone | 5'-sequence | 3'-sequence | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
JMFS082H03 | Sequence | 599 | 001981 (9) | ref|XP_009781344.1| | 3e-36 | PREDICTED: ABC transporter G family member 11 [Nicotiana sylvestris] | |||||
JMFS098F08 | Sequence | 642 | 001981 (9) | ref|XP_009781344.1| | 4e-67 | PREDICTED: ABC transporter G family member 11 [Nicotiana sylvestris] | |||||
JMFS105B06 | Sequence | 623 | 001981 (9) | ref|XP_009781344.1| | 1e-43 | PREDICTED: ABC transporter G family member 11 [Nicotiana sylvestris] | |||||
JMFS112A04 | Sequence | 627 | 001981 (9) | ref|XP_009781344.1| | 7e-73 | PREDICTED: ABC transporter G family member 11 [Nicotiana sylvestris] | |||||
JMFS125C06 | Sequence | 560 | 001981 (9) | ||||||||
JMSF003N17 | Sequence | 288 | 001981 (9) | 666 | 003009 (5) | ref|XP_008245603.1| | 3e-95 | PREDICTED: ABC transporter G family member 11 [Prunus mume] | |||
JMSF030M11 | Sequence | 681 | 001981 (9) | ref|XP_009602146.1| | 7e-40 | PREDICTED: ABC transporter G family member 11 [Nicotiana tomentosiformis] | 769 | 003009 (5) | ref|XP_008245603.1| | 6e-97 | PREDICTED: ABC transporter G family member 11 [Prunus mume] |
JMSF036P18 | Sequence | 679 | 001981 (9) | ref|XP_009781344.1| | 1e-48 | PREDICTED: ABC transporter G family member 11 [Nicotiana sylvestris] | 715 | 003009 (5) | ref|XP_008245603.1| | 9e-108 | PREDICTED: ABC transporter G family member 11 [Prunus mume] |
JMSF049H10 | Sequence | 358 | 001981 (9) | 711 | 003009 (5) | ref|XP_008245603.1| | 8e-83 | PREDICTED: ABC transporter G family member 11 [Prunus mume] |
This contig is upended
. : . : . : . : . : . :
JMFS112A04+ ACGT
____________________________________________________________
consensus ACGT
. : . : . : . : . : . :
JMFS112A04+ ATGCCGCAGTTCCGAAGGAGAGCTTGGCTTTGTGGCCGTTGAGGACGATTCTGCCGGAGA
JMFS098F08+ GCTTGGCTTTGTGGCCGTTGAGGACGATTCTGCCGGAGA
____________________________________________________________
consensus ATGCCGCAGTTCCGAAGGAGAGCTTGGCTTTGTGGCCGTTGAGGACGATTCTGCCGGAGA
. : . : . : . : . : . :
JMFS112A04+ GGAAAGCGTTGGCGGCGAGGCGGCCGGAGAGGGCGTCGAGGAGAGTAGATTTGCCGGAGC
JMFS098F08+ GGAAAGCGTTGGCGGCGAGGCGGCCGGAGAGGGCGTCGAGGAGAGTAGATTTGCCGGAGC
JMSF030M11+ GAGAGGGCGTCGAGGAGAGTAGATTTGCCGGAGC
JMSF036P18+ CCGGAGC
____________________________________________________________
consensus GGAAAGCGTTGGCGGCGAGGCGGCCGGAGAGGGCGTCGAGGAGAGTAGATTTGCCGGAGC
. : . : . : . : . : . :
JMFS112A04+ CGGAAGGTCCCATGAGGGCGGTGAAGGTTCCAGGCTCTGCATACCCGACGAGACCTTCCA
JMFS098F08+ CGGAAGGTCCCATGAGGGCGGTGAAGGTTCCAGGCTCTGCATACCCGACGAGACCTTCCA
JMSF030M11+ CGGAAGGTCCCATGAGGGCGGTGAAGGTTCCAGGCTCTGCATACCCGACGAGACCTTCCA
JMFS105B06+ TGAGGGCGGTGAAGGTCCCAGGCTCTGCATACCCGACGAGACCTTCCA
JMFS082H03+ GCATACCCGACGAGACCTTCCA
JMSF036P18+ CGGAAGGTCCCATGAGGGCGGTGAAGGTTCCAGGCTCTGCATACCCGACGAGACCTTCCA
____________________________________________________________
consensus CGGAAGGTCCCATGAGGGCGGTGAAGGTTCCAGGCTCTGCATACCCGACGAGACCTTCCA
. : . : . : . : . : . :
JMFS112A04+ GAACATTCTGGGTTTCTCCATTGCCGAGAGTAACCATAACCGTTAAATCCTTCCATGCCA
JMFS098F08+ GAACATTCTGGGTTTCTCCATTGCCGAGAGTAACCATAACCGTTAAATCCTTCCATGCCA
JMSF030M11+ GAACATTCTGGGTTTCTCCATTGCCGAGAGTAACCATAACCGTTAAATCCTTCCATGCCA
JMFS105B06+ GAACATTCTGGGTTTCTCCATTGCCGAGAGTAACCATAACCGTTAAATCCTTCCATGCCA
JMFS082H03+ GAACATTCTGGGTTTCTCCATGNCCGAGAGTAACCATAACCGTTAAATCCTTCCATGCCA
JMSF036P18+ GAACATTCTGGGTTTCTCCATTGCCGAGAGTAACCATAACCGTTAAATCCTTCCATGCCA
____________________________________________________________
consensus GAACATTCTGGGTTTCTCCATTGCCGAGAGTAACCATAACCGTTAAATCCTTCCATGCCA
. : . : . : . : . : . :
JMFS112A04+ GCCTGGCGGAGACGTCTCCCATGAACTCCGTGTTAGTTTTCTCCTTCCACAGCGTCTCGC
JMFS098F08+ GCCTGGCGGAGACGTCTCCCATGAACTCCGTGTTAGTTTTCTCCTTCCACAGCGTCTCGC
JMSF030M11+ GCCTGGCGGAGACGTCTCCCATGAACTCCGTGTTAGTTTTCTCCTTCCACAGCGTCTCGC
JMFS105B06+ GCCTGGCGGAGACGTCTCCCATGAACTCCGTGTTAGTTTTCTCCTTCCACAGCGTCTCGC
JMFS082H03+ GCCTGGCGGAGACGTCTCCCATGAACTCCGTGTTAGTTTTCTCCTTCCACAGCGTCTCGC
JMSF036P18+ GCCTGGCGGAGACGTCTCCCATGAACTCCGTGTTAGTTTTCTCCTTCCACAGCGTCTCGC
____________________________________________________________
consensus GCCTGGCGGAGACGTCTCCCATGAACTCCGTGTTAGTTTTCTCCTTCCACAGCGTCTCGC
. : . : . : . : . : . :
JMFS112A04+ TGAGAGGACTCAA-CCCCCCAACCACTATCCCATTCCCTTGCGGCTTGCTCGCCTCTATC
JMFS098F08+ TGAGAGGACTCAA-CCCCCCAACCACTATCCCATTCCCTTGCGGCTTGCTCGCCTCTATC
JMSF030M11+ TGAGAGGACTCAACCCCCCCAACCACTATCCCATTCCCTTGCGGCTTGCTCGCCTCTATC
JMFS105B06+ TGAGAGGACTCAA-CCCCCCAACCACTATCCCATTCCCTTGCGGCTTGCTCGCCTCTATC
JMFS082H03+ TGAGAGGACTCAA-CCCCCCAACCACTATCCCATTCCCTTGCGGCTTGCTCGCCTCTATC
JMSF036P18+ TGAGAGGACTCAA-CCCCCCAACCACTATCCCATTCCCTTGCGGCTTGCTCGCCTCTATC
____________________________________________________________
consensus TGAGAGGACTCAA-CCCCCCAACCACTATCCCATTCCCTTGCGGCTTGCTCGCCTCTATC
. : . : . : . : . : . :
JMFS112A04+ TCCATCATCACCTCCCCCGCCACCGACGAAGACGCCGCCGCCGTCGAGTTTCTCATCCTC
JMFS098F08+ TCCATCATCACCTCCCCCGCCACCGACGAAGACGCCGCCGCCGTCGAGTTTCTCATCCTC
JMSF049H10+ CCGCCGCCGTCGAGTTTCTCATCCTC
JMSF030M11+ TCCATCATCACCTCCCCCGCCACCGACGAAGACGCCGCCGCCGTCGAGTTTCTCATCCTC
JMFS105B06+ TCCATCATCACCTCCCCCGCCACCGACGAAGACGCCGCCGCCGTCGAGTTTCTCATCCTC
JMFS082H03+ TCCATCATCACCTCCCCCGCCACCGACGAAGACGCCGCCGCCGTCGAGTTTCTCATCCTC
JMSF036P18+ TCCATCATCACCTCCCCCGCCACCGACGAAGACGCCGCCGCCGTCGAGTTTCTCATCCTC
____________________________________________________________
consensus TCCATCATCACCTCCCCCGCCACCGACGAAGACGCCGCCGCCGTCGAGTTTCTCATCCTC
. : . : . : . : . : . :
JMFS112A04+ GCACTCATTCGTAATATTCGATCTTCAACAACTTAACTAATCTCCCCAATACTCCGAAGC
JMFS098F08+ GCACTCATTCGTAATATTCGATCTTCAACAACTTAACTAATCTCCCCAATACTCCGAAGC
JMSF049H10+ GCACTCATTCGTAATATTCGATCTTCAACAACTTAACTAATCTCCCCAATACTCCGAAGC
JMSF030M11+ GCACTCATTCGTAATATTCGATCTTCAACAACTTAACTAATCTCCCCAATACTCCGAAGC
JMFS105B06+ GCACTCATTCGTAATATTCGATCTTCAACAACTTAACTAATCTCCCCAATACTCCGAAGC
JMFS082H03+ GCACTCATTCGTAATATTCGATCTTCAACAACTTAACTAATCTCCCCAATACTCCGAAGC
JMSF036P18+ GCACTCATTCGTAATATTCGATCTTCAACAACTTAACTAATCTCCCCAATACTCCGAAGC
JMSF003N17+ CTCCGAAGC
JMFS125C06+ TCTCCCCAATACTCCGAAGC
____________________________________________________________
consensus GCACTCATTCGTAATATTCGATCTTCAACAACTTAACTAATCTCCCCAATACTCCGAAGC
. : . : . : . : . : . :
JMFS112A04+ ATAAATAAGCTCGATATGATCTCTGCAGGCAAGTTCCGCACTTGTAGAAGTTGAATCACT
JMFS098F08+ ATAAATAAGCTCGATATGATCTCTGCAGGCAAGTTCCGCACTTGTAGAAGTTGAATCACT
JMSF049H10+ ATAAATAAGCTCGATATGATCTCTGCNGGCAAGTTCCGCACTNGTAGAAGTNGAATCACT
JMSF030M11+ ATAAATAAGCTCGATATGATCTCTGCAGGCAAGTTCCGCACTTGTAGAAGTTGAATCACT
JMFS105B06+ ATAAATAAGCTCGATATGATCTCTGCAGGCAAGTTCCGCACTTGTAGAAGTTGAATCACT
JMFS082H03+ ATAAATAAGCTCGATATGATCTCTGCAGGCAAGTTCCGCACTTGTAGAAGTTGAATCACT
JMSF036P18+ ATAAATAAGCTCGATATGATCTCTGCAGGCAAGTTCCGCACTTGTAGAAGTTGAATCACT
JMSF003N17+ ATAAATAAGCTCGATATGATCTCTGCAGGCAAGTTCCGCACTTGTAGAAGTTGAATCACT
JMFS125C06+ ATAAATAAGCTCGATATGATCTCTGCAGGCAAGTTCCGCACTTGTAGAAGTTGAATCACT
____________________________________________________________
consensus ATAAATAAGCTCGATATGATCTCTGCAGGCAAGTTCCGCACTTGTAGAAGTTGAATCACT
. : . : . : . : . : . :
JMFS112A04+ GCAAATACGAACTGAACAGAAAGAAAGAAACGAGATGCGTATGAATGGAAGATGAGATTG
JMFS098F08+ GCAAATACGAACTGAACAGAAAGAAAGAAACGAGATGCGTATGAATGGAAGATGAGATTG
JMSF049H10+ GCAAATACGAACTGAACAGAAAGAAAGAAACGAGATGCGTATGAATGGAAGATGAGATTG
JMSF030M11+ GCAAATACGAACTGAACAGAAAGAAAGAAACGAGATGCGTATGAATGGAAGATGAGATTG
JMFS105B06+ GCAAATACGAACTGAACAGAAAGAAAGAAACGAGATGCGTATGAATGGAAGATGAGATTG
JMFS082H03+ GCAAATACGAACTGAACAGAAAGAAAGAAACGAGATGCGTATGAATGGAAGATGAGATTG
JMSF036P18+ GCAAATACGAACTGAACAGAAAGAAAGAAACGAGATGCGTATGAATGGAAGATGAGATTG
JMSF003N17+ GCAAATACGAACTGAACAGAAAGAAAGAAACGAGATGCGTATGAATGGAAGATGAGATTG
JMFS125C06+ GCAAATACGAACTGAACAGAAAGAAAGAAACGAGATGCGTATGAATGGAAGATGAGATTG
____________________________________________________________
consensus GCAAATACGAACTGAACAGAAAGAAAGAAACGAGATGCGTATGAATGGAAGATGAGATTG
. : . : . : . : . : . :
JMFS112A04+ CCGTGAGTTTGACTGATGAGAGAA
JMFS098F08+ CCGTGAGTTTGACTGATGAGAGAAGCTTGAAAGGACGTTAATGGAAATCTCTGTAGCTTC
JMSF049H10+ CCGTGAGTTTGACTGATGAGAGAAGCTTGAAAGGACGTTAATGGAAATCTCTGTAGCTTN
JMSF030M11+ CCGTGAGTTTGACTGATGAGAGAAGCTTGAAAGGACGTTAATGGAAATCTCTGTAGCTTC
JMFS105B06+ CCGTGAGTTTGACTGATGAGAGAAGCTTGAAAGGACGTTAATGGAAATCTCTGTAGCTTC
JMFS082H03+ CCGTGAGTTTGACTGATGAGAGAAGCTTGAAAGGACGTTAATGGAAATCTCTGTAGCTTC
JMSF036P18+ CCGTGAGTTTGACTGATGAGAGAAGCTTGAAAGGACGTTAATGGAAATCTCTGTAGCTTC
JMSF003N17+ CCGTGAGTTTGACTGATGAGAGAAGCTTGAAAGGACGTTAATGGAAATCTCTGTAGCTTC
JMFS125C06+ CCGTGAGTTTGACTGATGAGAGAAGCTTGAAAGGACGTTAATGGAAATCTCTGTAGCTTC
____________________________________________________________
consensus CCGTGAGTTTGACTGATGAGAGAAGCTTGAAAGGACGTTAATGGAAATCTCTGTAGCTTC
. : . : . : . : . : . :
JMFS098F08+ TCAG
JMSF049H10+ TCAGCTTCATGCAGATAGGGTTTCTTAGCTTCNTCCGATCCGCAGGTCAGGTTTGGTTTT
JMSF030M11+ TCAGCTTCATGCAGATAGGGTTTCTTAGCTTCTTCCGATCCGCAGGTCAGGTTTGGTTTT
JMFS105B06+ TCAGCTTCATGCAGATAGGGTTTCTTAGCTTCTTCCGATCCGCAGGTCAGGTTTGGTTTT
JMFS082H03+ TCAGCTTCATGCAGATAGGGTTTCTTAGCTTCTTCCGATCCGCAGGTCAGGTTTGGTTTT
JMSF036P18+ TCAGCTTCATGCAGATAGGGTTTCTTAGCTTCTTCCGATCCGCAGGTCAGGTTTGGTTTT
JMSF003N17+ TCAGCTTCATGCAGATAGGGTTTCTTAGCTTCTTCCGATCCGCAGGTCAGGTTTGGTTTT
JMFS125C06+ TCAGCTTCATGCAGATAGGGTTTCTTAGCTTCTTCCGATCCGCAGGTCAGGTTTGGTTTT
____________________________________________________________
consensus TCAGCTTCATGCAGATAGGGTTTCTTAGCTTCTTCCGATCCGCAGGTCAGGTTTGGTTTT
. : . : . : . : . : . :
JMSF049H10+ TGTGTGTTAGAAGAGTTGGCTATGCATTTCTT
JMSF030M11+ TGTGTGTTAGAAGAGTTGGCTATGCATTTCTTCACTTCTTCAATTC
JMFS105B06+ TGTGTGTTAGAAGAGTTGGCTATGCATTTCTTCACT
JMFS082H03+ TGTGTGTTAGAAGAGTTGGCTATGCATTTCTTCACTTC
JMSF036P18+ TGTGTGTTAGAAGAGTTGGCTATGCATTTCTTCACTTCTTCAATTCGCTCTTCTC
JMSF003N17+ TGTGTGTTAGAAGAGTTGGCTATGCATTTCTTCACTTC
JMFS125C06+ TGTGTGTTAGAAGAGTTGGCTATGCATTTCTTCACTTCTTCAATTCGCTCTTCTCACAGC
____________________________________________________________
consensus TGTGTGTTAGAAGAGTTGGCTATGCATTTCTTCACTTCTTCAATTCGCTCTTCTCACAGC
. : . : . : . : . : . :
JMFS125C06+ ATCACATGTTGATGCTGTTAACTACTATCCACCAACCAACCACCTTCATTTTCATTTCAT
____________________________________________________________
consensus ATCACATGTTGATGCTGTTAACTACTATCCACCAACCAACCACCTTCATTTTCATTTCAT
. : . : . : . : . : . :
JMFS125C06+ TAACCCACCATCCAAGTTTCAGCTCATTAACACTCCATCCTACTCATCATAAACCCAACT
____________________________________________________________
consensus TAACCCACCATCCAAGTTTCAGCTCATTAACACTCCATCCTACTCATCATAAACCCAACT
. : . : . : . : . : . :
JMFS125C06+ AAATACATTTATTTTCCTCAAAAAACAACCAACTAAACACCACCAAGCAACAAACCTAGA
____________________________________________________________
consensus AAATACATTTATTTTCCTCAAAAAACAACCAACTAAACACCACCAAGCAACAAACCTAGA
. : . : . : . : . : . :
JMFS125C06+ CTATTAACTTATTAGCTTACGTTAATCAACTACTTAAACTATATATGAGTGTTAAATTAA
____________________________________________________________
consensus CTATTAACTTATTAGCTTACGTTAATCAACTACTTAAACTATATATGAGTGTTAAATTAA