Contig 001981:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS082H03Sequence599001981 (9)ref|XP_009781344.1|3e-36PREDICTED: ABC transporter G family member 11 [Nicotiana sylvestris]
JMFS098F08Sequence642001981 (9)ref|XP_009781344.1|4e-67PREDICTED: ABC transporter G family member 11 [Nicotiana sylvestris]
JMFS105B06Sequence623001981 (9)ref|XP_009781344.1|1e-43PREDICTED: ABC transporter G family member 11 [Nicotiana sylvestris]
JMFS112A04Sequence627001981 (9)ref|XP_009781344.1|7e-73PREDICTED: ABC transporter G family member 11 [Nicotiana sylvestris]
JMFS125C06Sequence560001981 (9)
JMSF003N17Sequence288001981 (9)666003009 (5)ref|XP_008245603.1|3e-95PREDICTED: ABC transporter G family member 11 [Prunus mume]
JMSF030M11Sequence681001981 (9)ref|XP_009602146.1|7e-40PREDICTED: ABC transporter G family member 11 [Nicotiana tomentosiformis]769003009 (5)ref|XP_008245603.1|6e-97PREDICTED: ABC transporter G family member 11 [Prunus mume]
JMSF036P18Sequence679001981 (9)ref|XP_009781344.1|1e-48PREDICTED: ABC transporter G family member 11 [Nicotiana sylvestris]715003009 (5)ref|XP_008245603.1|9e-108PREDICTED: ABC transporter G family member 11 [Prunus mume]
JMSF049H10Sequence358001981 (9)711003009 (5)ref|XP_008245603.1|8e-83PREDICTED: ABC transporter G family member 11 [Prunus mume]

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS112A04+                                                                   ACGT
                      ____________________________________________________________
consensus                                                                     ACGT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS112A04+           ATGCCGCAGTTCCGAAGGAGAGCTTGGCTTTGTGGCCGTTGAGGACGATTCTGCCGGAGA
JMFS098F08+                                GCTTGGCTTTGTGGCCGTTGAGGACGATTCTGCCGGAGA
                      ____________________________________________________________
consensus             ATGCCGCAGTTCCGAAGGAGAGCTTGGCTTTGTGGCCGTTGAGGACGATTCTGCCGGAGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS112A04+           GGAAAGCGTTGGCGGCGAGGCGGCCGGAGAGGGCGTCGAGGAGAGTAGATTTGCCGGAGC
JMFS098F08+           GGAAAGCGTTGGCGGCGAGGCGGCCGGAGAGGGCGTCGAGGAGAGTAGATTTGCCGGAGC
JMSF030M11+                                     GAGAGGGCGTCGAGGAGAGTAGATTTGCCGGAGC
JMSF036P18+                                                                CCGGAGC
                      ____________________________________________________________
consensus             GGAAAGCGTTGGCGGCGAGGCGGCCGGAGAGGGCGTCGAGGAGAGTAGATTTGCCGGAGC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS112A04+           CGGAAGGTCCCATGAGGGCGGTGAAGGTTCCAGGCTCTGCATACCCGACGAGACCTTCCA
JMFS098F08+           CGGAAGGTCCCATGAGGGCGGTGAAGGTTCCAGGCTCTGCATACCCGACGAGACCTTCCA
JMSF030M11+           CGGAAGGTCCCATGAGGGCGGTGAAGGTTCCAGGCTCTGCATACCCGACGAGACCTTCCA
JMFS105B06+                       TGAGGGCGGTGAAGGTCCCAGGCTCTGCATACCCGACGAGACCTTCCA
JMFS082H03+                                                 GCATACCCGACGAGACCTTCCA
JMSF036P18+           CGGAAGGTCCCATGAGGGCGGTGAAGGTTCCAGGCTCTGCATACCCGACGAGACCTTCCA
                      ____________________________________________________________
consensus             CGGAAGGTCCCATGAGGGCGGTGAAGGTTCCAGGCTCTGCATACCCGACGAGACCTTCCA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS112A04+           GAACATTCTGGGTTTCTCCATTGCCGAGAGTAACCATAACCGTTAAATCCTTCCATGCCA
JMFS098F08+           GAACATTCTGGGTTTCTCCATTGCCGAGAGTAACCATAACCGTTAAATCCTTCCATGCCA
JMSF030M11+           GAACATTCTGGGTTTCTCCATTGCCGAGAGTAACCATAACCGTTAAATCCTTCCATGCCA
JMFS105B06+           GAACATTCTGGGTTTCTCCATTGCCGAGAGTAACCATAACCGTTAAATCCTTCCATGCCA
JMFS082H03+           GAACATTCTGGGTTTCTCCATGNCCGAGAGTAACCATAACCGTTAAATCCTTCCATGCCA
JMSF036P18+           GAACATTCTGGGTTTCTCCATTGCCGAGAGTAACCATAACCGTTAAATCCTTCCATGCCA
                      ____________________________________________________________
consensus             GAACATTCTGGGTTTCTCCATTGCCGAGAGTAACCATAACCGTTAAATCCTTCCATGCCA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS112A04+           GCCTGGCGGAGACGTCTCCCATGAACTCCGTGTTAGTTTTCTCCTTCCACAGCGTCTCGC
JMFS098F08+           GCCTGGCGGAGACGTCTCCCATGAACTCCGTGTTAGTTTTCTCCTTCCACAGCGTCTCGC
JMSF030M11+           GCCTGGCGGAGACGTCTCCCATGAACTCCGTGTTAGTTTTCTCCTTCCACAGCGTCTCGC
JMFS105B06+           GCCTGGCGGAGACGTCTCCCATGAACTCCGTGTTAGTTTTCTCCTTCCACAGCGTCTCGC
JMFS082H03+           GCCTGGCGGAGACGTCTCCCATGAACTCCGTGTTAGTTTTCTCCTTCCACAGCGTCTCGC
JMSF036P18+           GCCTGGCGGAGACGTCTCCCATGAACTCCGTGTTAGTTTTCTCCTTCCACAGCGTCTCGC
                      ____________________________________________________________
consensus             GCCTGGCGGAGACGTCTCCCATGAACTCCGTGTTAGTTTTCTCCTTCCACAGCGTCTCGC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS112A04+           TGAGAGGACTCAA-CCCCCCAACCACTATCCCATTCCCTTGCGGCTTGCTCGCCTCTATC
JMFS098F08+           TGAGAGGACTCAA-CCCCCCAACCACTATCCCATTCCCTTGCGGCTTGCTCGCCTCTATC
JMSF030M11+           TGAGAGGACTCAACCCCCCCAACCACTATCCCATTCCCTTGCGGCTTGCTCGCCTCTATC
JMFS105B06+           TGAGAGGACTCAA-CCCCCCAACCACTATCCCATTCCCTTGCGGCTTGCTCGCCTCTATC
JMFS082H03+           TGAGAGGACTCAA-CCCCCCAACCACTATCCCATTCCCTTGCGGCTTGCTCGCCTCTATC
JMSF036P18+           TGAGAGGACTCAA-CCCCCCAACCACTATCCCATTCCCTTGCGGCTTGCTCGCCTCTATC
                      ____________________________________________________________
consensus             TGAGAGGACTCAA-CCCCCCAACCACTATCCCATTCCCTTGCGGCTTGCTCGCCTCTATC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS112A04+           TCCATCATCACCTCCCCCGCCACCGACGAAGACGCCGCCGCCGTCGAGTTTCTCATCCTC
JMFS098F08+           TCCATCATCACCTCCCCCGCCACCGACGAAGACGCCGCCGCCGTCGAGTTTCTCATCCTC
JMSF049H10+                                             CCGCCGCCGTCGAGTTTCTCATCCTC
JMSF030M11+           TCCATCATCACCTCCCCCGCCACCGACGAAGACGCCGCCGCCGTCGAGTTTCTCATCCTC
JMFS105B06+           TCCATCATCACCTCCCCCGCCACCGACGAAGACGCCGCCGCCGTCGAGTTTCTCATCCTC
JMFS082H03+           TCCATCATCACCTCCCCCGCCACCGACGAAGACGCCGCCGCCGTCGAGTTTCTCATCCTC
JMSF036P18+           TCCATCATCACCTCCCCCGCCACCGACGAAGACGCCGCCGCCGTCGAGTTTCTCATCCTC
                      ____________________________________________________________
consensus             TCCATCATCACCTCCCCCGCCACCGACGAAGACGCCGCCGCCGTCGAGTTTCTCATCCTC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS112A04+           GCACTCATTCGTAATATTCGATCTTCAACAACTTAACTAATCTCCCCAATACTCCGAAGC
JMFS098F08+           GCACTCATTCGTAATATTCGATCTTCAACAACTTAACTAATCTCCCCAATACTCCGAAGC
JMSF049H10+           GCACTCATTCGTAATATTCGATCTTCAACAACTTAACTAATCTCCCCAATACTCCGAAGC
JMSF030M11+           GCACTCATTCGTAATATTCGATCTTCAACAACTTAACTAATCTCCCCAATACTCCGAAGC
JMFS105B06+           GCACTCATTCGTAATATTCGATCTTCAACAACTTAACTAATCTCCCCAATACTCCGAAGC
JMFS082H03+           GCACTCATTCGTAATATTCGATCTTCAACAACTTAACTAATCTCCCCAATACTCCGAAGC
JMSF036P18+           GCACTCATTCGTAATATTCGATCTTCAACAACTTAACTAATCTCCCCAATACTCCGAAGC
JMSF003N17+                                                              CTCCGAAGC
JMFS125C06+                                                   TCTCCCCAATACTCCGAAGC
                      ____________________________________________________________
consensus             GCACTCATTCGTAATATTCGATCTTCAACAACTTAACTAATCTCCCCAATACTCCGAAGC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS112A04+           ATAAATAAGCTCGATATGATCTCTGCAGGCAAGTTCCGCACTTGTAGAAGTTGAATCACT
JMFS098F08+           ATAAATAAGCTCGATATGATCTCTGCAGGCAAGTTCCGCACTTGTAGAAGTTGAATCACT
JMSF049H10+           ATAAATAAGCTCGATATGATCTCTGCNGGCAAGTTCCGCACTNGTAGAAGTNGAATCACT
JMSF030M11+           ATAAATAAGCTCGATATGATCTCTGCAGGCAAGTTCCGCACTTGTAGAAGTTGAATCACT
JMFS105B06+           ATAAATAAGCTCGATATGATCTCTGCAGGCAAGTTCCGCACTTGTAGAAGTTGAATCACT
JMFS082H03+           ATAAATAAGCTCGATATGATCTCTGCAGGCAAGTTCCGCACTTGTAGAAGTTGAATCACT
JMSF036P18+           ATAAATAAGCTCGATATGATCTCTGCAGGCAAGTTCCGCACTTGTAGAAGTTGAATCACT
JMSF003N17+           ATAAATAAGCTCGATATGATCTCTGCAGGCAAGTTCCGCACTTGTAGAAGTTGAATCACT
JMFS125C06+           ATAAATAAGCTCGATATGATCTCTGCAGGCAAGTTCCGCACTTGTAGAAGTTGAATCACT
                      ____________________________________________________________
consensus             ATAAATAAGCTCGATATGATCTCTGCAGGCAAGTTCCGCACTTGTAGAAGTTGAATCACT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS112A04+           GCAAATACGAACTGAACAGAAAGAAAGAAACGAGATGCGTATGAATGGAAGATGAGATTG
JMFS098F08+           GCAAATACGAACTGAACAGAAAGAAAGAAACGAGATGCGTATGAATGGAAGATGAGATTG
JMSF049H10+           GCAAATACGAACTGAACAGAAAGAAAGAAACGAGATGCGTATGAATGGAAGATGAGATTG
JMSF030M11+           GCAAATACGAACTGAACAGAAAGAAAGAAACGAGATGCGTATGAATGGAAGATGAGATTG
JMFS105B06+           GCAAATACGAACTGAACAGAAAGAAAGAAACGAGATGCGTATGAATGGAAGATGAGATTG
JMFS082H03+           GCAAATACGAACTGAACAGAAAGAAAGAAACGAGATGCGTATGAATGGAAGATGAGATTG
JMSF036P18+           GCAAATACGAACTGAACAGAAAGAAAGAAACGAGATGCGTATGAATGGAAGATGAGATTG
JMSF003N17+           GCAAATACGAACTGAACAGAAAGAAAGAAACGAGATGCGTATGAATGGAAGATGAGATTG
JMFS125C06+           GCAAATACGAACTGAACAGAAAGAAAGAAACGAGATGCGTATGAATGGAAGATGAGATTG
                      ____________________________________________________________
consensus             GCAAATACGAACTGAACAGAAAGAAAGAAACGAGATGCGTATGAATGGAAGATGAGATTG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS112A04+           CCGTGAGTTTGACTGATGAGAGAA                                    
JMFS098F08+           CCGTGAGTTTGACTGATGAGAGAAGCTTGAAAGGACGTTAATGGAAATCTCTGTAGCTTC
JMSF049H10+           CCGTGAGTTTGACTGATGAGAGAAGCTTGAAAGGACGTTAATGGAAATCTCTGTAGCTTN
JMSF030M11+           CCGTGAGTTTGACTGATGAGAGAAGCTTGAAAGGACGTTAATGGAAATCTCTGTAGCTTC
JMFS105B06+           CCGTGAGTTTGACTGATGAGAGAAGCTTGAAAGGACGTTAATGGAAATCTCTGTAGCTTC
JMFS082H03+           CCGTGAGTTTGACTGATGAGAGAAGCTTGAAAGGACGTTAATGGAAATCTCTGTAGCTTC
JMSF036P18+           CCGTGAGTTTGACTGATGAGAGAAGCTTGAAAGGACGTTAATGGAAATCTCTGTAGCTTC
JMSF003N17+           CCGTGAGTTTGACTGATGAGAGAAGCTTGAAAGGACGTTAATGGAAATCTCTGTAGCTTC
JMFS125C06+           CCGTGAGTTTGACTGATGAGAGAAGCTTGAAAGGACGTTAATGGAAATCTCTGTAGCTTC
                      ____________________________________________________________
consensus             CCGTGAGTTTGACTGATGAGAGAAGCTTGAAAGGACGTTAATGGAAATCTCTGTAGCTTC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS098F08+           TCAG                                                        
JMSF049H10+           TCAGCTTCATGCAGATAGGGTTTCTTAGCTTCNTCCGATCCGCAGGTCAGGTTTGGTTTT
JMSF030M11+           TCAGCTTCATGCAGATAGGGTTTCTTAGCTTCTTCCGATCCGCAGGTCAGGTTTGGTTTT
JMFS105B06+           TCAGCTTCATGCAGATAGGGTTTCTTAGCTTCTTCCGATCCGCAGGTCAGGTTTGGTTTT
JMFS082H03+           TCAGCTTCATGCAGATAGGGTTTCTTAGCTTCTTCCGATCCGCAGGTCAGGTTTGGTTTT
JMSF036P18+           TCAGCTTCATGCAGATAGGGTTTCTTAGCTTCTTCCGATCCGCAGGTCAGGTTTGGTTTT
JMSF003N17+           TCAGCTTCATGCAGATAGGGTTTCTTAGCTTCTTCCGATCCGCAGGTCAGGTTTGGTTTT
JMFS125C06+           TCAGCTTCATGCAGATAGGGTTTCTTAGCTTCTTCCGATCCGCAGGTCAGGTTTGGTTTT
                      ____________________________________________________________
consensus             TCAGCTTCATGCAGATAGGGTTTCTTAGCTTCTTCCGATCCGCAGGTCAGGTTTGGTTTT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF049H10+           TGTGTGTTAGAAGAGTTGGCTATGCATTTCTT                            
JMSF030M11+           TGTGTGTTAGAAGAGTTGGCTATGCATTTCTTCACTTCTTCAATTC              
JMFS105B06+           TGTGTGTTAGAAGAGTTGGCTATGCATTTCTTCACT                        
JMFS082H03+           TGTGTGTTAGAAGAGTTGGCTATGCATTTCTTCACTTC                      
JMSF036P18+           TGTGTGTTAGAAGAGTTGGCTATGCATTTCTTCACTTCTTCAATTCGCTCTTCTC     
JMSF003N17+           TGTGTGTTAGAAGAGTTGGCTATGCATTTCTTCACTTC                      
JMFS125C06+           TGTGTGTTAGAAGAGTTGGCTATGCATTTCTTCACTTCTTCAATTCGCTCTTCTCACAGC
                      ____________________________________________________________
consensus             TGTGTGTTAGAAGAGTTGGCTATGCATTTCTTCACTTCTTCAATTCGCTCTTCTCACAGC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS125C06+           ATCACATGTTGATGCTGTTAACTACTATCCACCAACCAACCACCTTCATTTTCATTTCAT
                      ____________________________________________________________
consensus             ATCACATGTTGATGCTGTTAACTACTATCCACCAACCAACCACCTTCATTTTCATTTCAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS125C06+           TAACCCACCATCCAAGTTTCAGCTCATTAACACTCCATCCTACTCATCATAAACCCAACT
                      ____________________________________________________________
consensus             TAACCCACCATCCAAGTTTCAGCTCATTAACACTCCATCCTACTCATCATAAACCCAACT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS125C06+           AAATACATTTATTTTCCTCAAAAAACAACCAACTAAACACCACCAAGCAACAAACCTAGA
                      ____________________________________________________________
consensus             AAATACATTTATTTTCCTCAAAAAACAACCAACTAAACACCACCAAGCAACAAACCTAGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS125C06+           CTATTAACTTATTAGCTTACGTTAATCAACTACTTAAACTATATATGAGTGTTAAATTAA
                      ____________________________________________________________
consensus             CTATTAACTTATTAGCTTACGTTAATCAACTACTTAAACTATATATGAGTGTTAAATTAA