Contig 001968:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFN005O19+                                       TGAGAAAGAACCCGTTGTTGGAAACGTACCAC
JMFS105E04+                                                         TGGAAACGTACCAC
                      ____________________________________________________________
consensus                                         TGAGAAAGAACCCGTTGTTGGAAACGTACCAC
 
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JMFN005O19+           ACAAGTCATTACTCGACAAGTCCAGAATCTTGAGATTTGCAAGCTTGGTAAGTTGTCTTG
JMFS105E04+           ACAAGTCATTACTCGACAAGTCCAGAATCTTGAGATTTGCAAGCTTGGTAAGTTGTCTTG
                      ____________________________________________________________
consensus             ACAAGTCATTACTCGACAAGTCCAGAATCTTGAGATTTGCAAGCTTGGTAAGTTGTCTTG
 
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JMFN005O19+           GTATTCTTCCAGTTAGGGTGTTGCCGTTCAGCCGCATGAAGCGCAGGTTGGAGAGTTTGG
JMFS105E04+           GTATTCTTCCAGTTAGGGTGTTGCCGTTCAGCCGCATGAAGAGCAGGTTGGAGAGTTTGG
                      ____________________________________________________________
consensus             GTATTCTTCCAGTTAGGGTGTTGCCGTTCAGCCGCATGAAGCGCAGGTTGGAGAGTTTGG
 
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JMFN005O19+           AGAGGGAAGGAGGGATGGTGCCAGTGAGGTTATTATGGTAAAGATCAAGGCTCACAAGAC
JMFS105E04+           AGAGGGAAGGAGGGATGGTGCCAGTGAGGTTATTATGGTAAAGATCAAGGCTCACAAGAC
                      ____________________________________________________________
consensus             AGAGGGAAGGAGGGATGGTGCCAGTGAGGTTATTATGGTAAAGATCAAGGCTCACAAGAC
 
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JMFN005O19+           TCTTGAGCCCACCAAACTCTTCTGGAATGGGTCCTTCCAAGTTGTTCATGTATAGTTCCA
JMFS105E04+           TCTTGAGCCCACCAAACTCTTCTGGAATGGGTCCTTCCAAGTTGTTCATGTATAGTTCCA
                      ____________________________________________________________
consensus             TCTTGAGCCCACCAAACTCTTCTGGAATGGGTCCTTCCAAGTTGTTCATGTATAGTTCCA
 
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JMFN005O19+           GATACTGAAGATGCTCCAGCTTCCCCAACTCCGGTACCAGATTCCCCGACAGCTTTGCGT
JMFS105E04+           GATACTGAAGATGCTCCAGCTTCCCCAACTCCGGTACCAGAATCCCCGACAGCTTTGCGT
                      ____________________________________________________________
consensus             GATACTGAAGATGCTCCAGCTTCCCCAACTCCGGTACCAGATTCCCCGACAGCTTTGCGT
 
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JMFN005O19+           TTCCCAGATCAAGCCTAGTGACCCTATTGTCAGAGTTGCAGGTGACATGAAACCAAGTAC
JMFS105E04+           TTCCCAGATCAAGCCTAGTGACCCTATTGTCAGAGTTGCAGGTGACATGAAACCAAGTAC
                      ____________________________________________________________
consensus             TTCCCAGATCAAGCCTAGTGACCCTATTGTCAGAGTTGCAGGTGACATGAAACCAAGTAC
 
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JMFN005O19+           AAGGATCAACCAACGTTGGATCCCAACTCTGCAGAACATTATTAGGGTCTCTCACTGCTC
JMFS105E04+           AAGGATCAACCAACGTTGGATCCCAACTCTGCAGAACATTATTAGGGTCTCTCACTGCTC
                      ____________________________________________________________
consensus             AAGGATCAACCAACGTTGGATCCCAACTCTGCAGAACATTATTAGGGTCTCTCACTGCTC
 
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JMFN005O19+           TTCTCAGTGCATACAAAGCATCTCCTTCTGAGTTTGCATCAGCGAGTGGCAAGGAGATGA
JMFS105E04+           TTCTCAGTGCATACAAAGCATCTCCTTCTGAGTTTGCATCAGCGAGTGGCAAGGAGATGA
                      ____________________________________________________________
consensus             TTCTCAGTGCATACAAAGCATCTCCTTCTGAGTTTGCATCAGCGAGTGGCAAGGAGATGA
 
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JMFN005O19+           GGAGAAGAAGATGGAAGAGAATGGTGAAGATCGCCATTGGAGCTTCAGTTTAGAATGAAG
JMFS105E04+           GGAGAAGAAGATGGAAGAGAATGGTGAAGATCGCCATTGGAGCTTCAGTTTAGAATGAAG
                      ____________________________________________________________
consensus             GGAGAAGAAGATGGAAGAGAATGGTGAAGATCGCCATTGGAGCTTCAGTTTAGAATGAAG
 
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JMFN005O19+           AAGAGTTTAAGTGAAGAGGGAATGTATGAGAGAGAGAGA                     
JMFS105E04+           AAGAGTTTAAGTGAAGAGGGAATGTATGAGAGAGAGAGAGAGAATTTGAAGCAAATAGGA
                      ____________________________________________________________
consensus             AAGAGTTTAAGTGAAGAGGGAATGTATGAGAGAGAGAGAGAGAATTTGAAGCAAATAGGA