Contig 001945:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF039B10Sequence436001945 (6)ref|XP_010110030.1|1e-12Mitogen-activated protein kinase-NTF3-like protein [Morus notabilis] gb|AHJ80966586009859 (3)emb|CDP03486.1|4e-48unnamed protein product [Coffea canephora]
JMFF050M07Sequence633001945 (6)ref|XP_010110030.1|2e-56Mitogen-activated protein kinase-NTF3-like protein [Morus notabilis] gb|AHJ80966566009859 (3)ref|XP_011074575.1|3e-31PREDICTED: mitogen-activated protein kinase homolog NTF3 [Sesamum indicum]
JMFS082D08Sequence600001945 (6)emb|CDX68178.1|8e-35BnaA07g22180D [Brassica napus]
JMSF003G18Sequence441001945 (6)ref|XP_010110030.1|2e-04Mitogen-activated protein kinase-NTF3-like protein [Morus notabilis] gb|AHJ80966
JMSF004G18Sequence465001945 (6)ref|XP_010110030.1|9e-10Mitogen-activated protein kinase-NTF3-like protein [Morus notabilis] gb|AHJ80966381008317 (7)
JMSF017M12Sequence254001945 (6)ref|XP_010110030.1|8e-28Mitogen-activated protein kinase-NTF3-like protein [Morus notabilis] gb|AHJ80966601009859 (3)sp|Q40884.1|MPK_PETHY8e-40RecName: Full=Mitogen-activated protein kinase homolog 1; AltName: Full=PMEK1 [

Alignment

This contig is upended


. : . : . : . : . : . :
JMFF050M07+ GAATAGGCAACATGACATCTTTCAGAGAAATCACGTTCGCGT
                      ____________________________________________________________
consensus GAATAGGCAACATGACATCTTTCAGAGAAATCACGTTCGCGT
 
. : . : . : . : . : . :
JMFF050M07+ GTCTAAGATGGCGGAGAAGCTTTATTTCACGCAAAGTTCTCAGCGCATCAACGCGGTTCT
                      ____________________________________________________________
consensus GTCTAAGATGGCGGAGAAGCTTTATTTCACGCAAAGTTCTCAGCGCATCAACGCGGTTCT
 
. : . : . : . : . : . :
JMFF050M07+ CAAACGCGTTATGTATNTTCTTGATGGCAACTCTTTCGTTCGTTTCCTTGTTGACGGATG
JMSF017M12+ CAACTCTTTCGTTCGTTTCCTTGNTGACGGATG
JMFS082D08+ CAAACGCGTTATGTATTTTCTTGATGGCAACTCTTTCGTTCGTTTCCTTGTTGACGGATG
                      ____________________________________________________________
consensus CAAACGCGTTATGTATTTTCTTGATGGCAACTCTTTCGTTCGTTTCCTTGTTGACGGATG
 
. : . : . : . : . : . :
JMFF050M07+ AGCAGACAATACCATACGCCCCTCGACCAATGGGCTTGATTGGCACGTACTTCGTGTCAA
JMSF004G18+ CTTCGTGTCAA
JMFF039B10+ TTGATTGGCACGTACTTCGTGTCAA
JMSF017M12+ AGCAGACAATNCCATACGCCCCTNGACCAATGGGCTTGATTGGCANGTACTCCGTGTCAA
JMFS082D08+ AGCAGACAATACCATACGCCCCTCGACCAATGGGCTTGATTGGCACGTACTTCGTGTCAA
                      ____________________________________________________________
consensus AGCAGACAATACCATACGCCCCTCGACCAATGGGCTTGATTGGCACGTACTTCGTGTCAA
 
. : . : . : . : . : . :
JMFF050M07+ TCTCAAACAACGTTTGCCACATAGAATAGTAATGCTTCCCAGGAGTCATAACTCCATTCG
JMSF004G18+ TCTCAAACAACGTTTGCCACATAGAATAGTAATGCTTCCCAGGAGTCATAACTCCATTCG
JMSF003G18+ TTGCCACATAGAATAGTAATGCTTCCCAGGAGTCATAACTCCATTCG
JMFF039B10+ TCTCAAACAACGTTTGCCACATAGAATAGTAATGCTTCCCAGGAGTCATAACTCCATTCG
JMSF017M12+ TCTCAAACAACGTTTGCCACATAGAATAGTAATGCTTCCCAGGAGTCATAACTCCATTCG
JMFS082D08+ TCTCAAACAACGTTTGCCACATAGAATAGTAATGCTTCCCAGGAGTCATAACTCCATTCG
                      ____________________________________________________________
consensus TCTCAAACAACGTTTGCCACATAGAATAGTAATGCTTCCCAGGAGTCATAACTCCATTCG
 
. : . : . : . : . : . :
JMFF050M07+ GAGGATCAACAGGGGTAGCCGCCATTTCCTTTCGACAACAAATTCTCCTCGAAACCCTTC
JMSF004G18+ GAGGATCAACAGGGGTAGCCGCCATTTCCTTTCGACAACAAATTCTCCTCGAAACCCTTC
JMSF003G18+ GAGGATCAACAGGGGTAGCCGCCATTTCCTTTCGACAACAAATTCTCCTCGAAACCCTTC
JMFF039B10+ GAGGATCAACAGGGGTAGCCGCCATTTCCTTTCGACAACAAATTCTCCTCGAAACCCTTC
JMSF017M12+ GAGGATCAACAGGGGTAGCCGCCATTTCCTTTNGACAACAAATTCTCCTNGAAACCCTTC
JMFS082D08+ GAGGATCAACAGGGGTAGCCGCCATTTCCTTTCGACAACAAATTCTCCTCGAAACCCTTC
                      ____________________________________________________________
consensus GAGGATCAACAGGGGTAGCCGCCATTTCCTTTCGACAACAAATTCTCCTCGAAACCCTTC
 
. : . : . : . : . : . :
JMFF050M07+ ACTGTCGTCTCCTCAGCTCCATCTAAAGATCGAATTTTCCAACGAGCTTCAAACCTTTTC
JMSF004G18+ ACTGTCGTCTCCTCAGCTCCATCTAAAGATCGAATTTTCCAACGAGCTTCAAACCTTTTC
JMSF003G18+ ACTGTCGTCTCCTCAGCTCCATCTAAAGATCGAATTTTCCAACGAGCTTCAAACCTTTTC
JMFF039B10+ ACTGTCGTCTCCTCAGCTCCATCTAAAGATCGAATTTTCCAACGAGCTTCAAACCTTTTC
JMSF017M12+ ACTGTCGTCTCCTCAGCTCCATCTAAAGATCGAATTTTCC
JMFS082D08+ ACTGTCGTCTCCTCAGCTCCATCTAAAGATCGAATTTTCCAACGAGCTTCAAACCTTTTC
                      ____________________________________________________________
consensus ACTGTCGTCTCCTCAGCTCCATCTAAAGATCGAATTTTCCAACGAGCTTCAAACCTTTTC
 
. : . : . : . : . : . :
JMFF050M07+ CCAGATTAAACTCCAATATCTCAGGAAATTCCCGTCCGGTCCCAGCAAACTCGAATTCCC
JMSF004G18+ CCAGATTAAACTCCAATATCTCAGGAAATTCCCGTCCGGTCCCAGCAAACTCGAATTCCC
JMSF003G18+ CCAGATTAAACTCCAATATCTCAGGAAATTCCCGTCCGGTCCCAGCAAACTCGAATTCCC
JMFF039B10+ CCAGATTAAACTCCAATATCTCAGGAAATTCCCGTCCGGTCCCAGCAAACTCGAATTCCC
JMFS082D08+ CCAGATTAAACTCCAATATCTCAGGAAATTCCCGTCCGGTCCCAGCAAACTCGAATTCCC
                      ____________________________________________________________
consensus CCAGATTAAACTCCAATATCTCAGGAAATTCCCGTCCGGTCCCAGCAAACTCGAATTCCC
 
. : . : . : . : . : . :
JMFF050M07+ CAGTGTTAGTCACTAAAAAATCCTCAACCTTTGAGATAACCCAAGTTAATTAGCCCAGAA
JMSF004G18+ CAGTGTTAGTCACTAAAAAATCCTCAACCTTTGAGATAACCCAAGTTAATTAGCCCAGAA
JMSF003G18+ CAGTGTTAGTCACTAAAAAATCCTCAACCTTTGAGATAACCCAAGTTAATTAGCCCAGAA
JMFF039B10+ CAGTGTTAGTCACTAAAAAATCCTCAACCTTTGAGATAACCCAAGTTAATTAGCCCAGAA
JMFS082D08+ CAGTGTTAGTCACTAAAAAATCCTCAACCTTTGAGATAACCCAAGTTAATTAGCCCAGAA
                      ____________________________________________________________
consensus CAGTGTTAGTCACTAAAAAATCCTCAACCTTTGAGATAACCCAAGTTAATTAGCCCAGAA
 
. : . : . : . : . : . :
JMFF050M07+ AACAATTTGATGGCGCCTTAACGAGTCAGATCAGAAGGATCTAAAACAGATTAATTGCCC
JMSF004G18+ AACAATTTGATGGCGCCTTAACGAGTCAGATCAGAAGGATCTAAAACAGATTAATTGCCC
JMSF003G18+ AACAATTTGATGGCGCCTTAACGAGTCAGATCAGAAGGATCTAAAACAGATTAATTGCCC
JMFF039B10+ AACAATTTGATGGCGCCTTAACGAGTCAGATCAGAAGGATCTAAAACAGATTAATTGCCC
JMFS082D08+ AACAATTTGATGGCGCCTTAACGAGTCAGATCAGAAGGATCTAAAACAGATTAATTGCCC
                      ____________________________________________________________
consensus AACAATTTGATGGCGCCTTAACGAGTCAGATCAGAAGGATCTAAAACAGATTAATTGCCC
 
. : . : . : . : . : . :
JMFF050M07+ TAAACATTTCCCCGGCTCCCACAGTAAACGGGTCACTTTACGTCTGTACCC
JMSF004G18+ TAAACATTTCCCCGGCTCCCACAGTAAACGGGTCACTTTACGTCTGTACCCGAACTTTTA
JMSF003G18+ TAAACATTTCCCCGGCTCCCACAGTAAACGGGTCACTTTACGTCTGTACCCGAACTTTTA
JMFF039B10+ TAAACATTTCCCCGGCTCCCACAGTAAACGGGTCACTTTACGTCTGTACCC
JMFS082D08+ TAAACATTTCCCCGGCTCCCACAGTAAACGGGTCACTTTACGTCTGTACCCGAACTTTTA
                      ____________________________________________________________
consensus TAAACATTTCCCCGGCTCCCACAGTAAACGGGTCACTTTACGTCTGTACCCGAACTTTTA
 
. : . : . : . : . : . :
JMSF004G18+ CGGTATATGCTCCAATAGATATCCTTGCCAAAC
JMSF003G18+ CGGTATATGCTCCAATAGATATCCTTGCCAAAC
JMFS082D08+ CGGTATATGCTCCAATAGATATCCTTGCCAAACGCCTAGTGCCCACGACAAGATATTTGA
                      ____________________________________________________________
consensus CGGTATATGCTCCAATAGATATCCTTGCCAAACGCCTAGTGCCCACGACAAGATATTTGA