clone | 5'-sequence | 3'-sequence | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
JMFF039B10 | Sequence | 436 | 001945 (6) | ref|XP_010110030.1| | 1e-12 | Mitogen-activated protein kinase-NTF3-like protein [Morus notabilis] gb|AHJ80966 | 586 | 009859 (3) | emb|CDP03486.1| | 4e-48 | unnamed protein product [Coffea canephora] |
JMFF050M07 | Sequence | 633 | 001945 (6) | ref|XP_010110030.1| | 2e-56 | Mitogen-activated protein kinase-NTF3-like protein [Morus notabilis] gb|AHJ80966 | 566 | 009859 (3) | ref|XP_011074575.1| | 3e-31 | PREDICTED: mitogen-activated protein kinase homolog NTF3 [Sesamum indicum] |
JMFS082D08 | Sequence | 600 | 001945 (6) | emb|CDX68178.1| | 8e-35 | BnaA07g22180D [Brassica napus] | |||||
JMSF003G18 | Sequence | 441 | 001945 (6) | ref|XP_010110030.1| | 2e-04 | Mitogen-activated protein kinase-NTF3-like protein [Morus notabilis] gb|AHJ80966 | |||||
JMSF004G18 | Sequence | 465 | 001945 (6) | ref|XP_010110030.1| | 9e-10 | Mitogen-activated protein kinase-NTF3-like protein [Morus notabilis] gb|AHJ80966 | 381 | 008317 (7) | |||
JMSF017M12 | Sequence | 254 | 001945 (6) | ref|XP_010110030.1| | 8e-28 | Mitogen-activated protein kinase-NTF3-like protein [Morus notabilis] gb|AHJ80966 | 601 | 009859 (3) | sp|Q40884.1|MPK_PETHY | 8e-40 | RecName: Full=Mitogen-activated protein kinase homolog 1; AltName: Full=PMEK1 [ |
This contig is upended
. : . : . : . : . : . :
JMFF050M07+ GAATAGGCAACATGACATCTTTCAGAGAAATCACGTTCGCGT
____________________________________________________________
consensus GAATAGGCAACATGACATCTTTCAGAGAAATCACGTTCGCGT
. : . : . : . : . : . :
JMFF050M07+ GTCTAAGATGGCGGAGAAGCTTTATTTCACGCAAAGTTCTCAGCGCATCAACGCGGTTCT
____________________________________________________________
consensus GTCTAAGATGGCGGAGAAGCTTTATTTCACGCAAAGTTCTCAGCGCATCAACGCGGTTCT
. : . : . : . : . : . :
JMFF050M07+ CAAACGCGTTATGTATNTTCTTGATGGCAACTCTTTCGTTCGTTTCCTTGTTGACGGATG
JMSF017M12+ CAACTCTTTCGTTCGTTTCCTTGNTGACGGATG
JMFS082D08+ CAAACGCGTTATGTATTTTCTTGATGGCAACTCTTTCGTTCGTTTCCTTGTTGACGGATG
____________________________________________________________
consensus CAAACGCGTTATGTATTTTCTTGATGGCAACTCTTTCGTTCGTTTCCTTGTTGACGGATG
. : . : . : . : . : . :
JMFF050M07+ AGCAGACAATACCATACGCCCCTCGACCAATGGGCTTGATTGGCACGTACTTCGTGTCAA
JMSF004G18+ CTTCGTGTCAA
JMFF039B10+ TTGATTGGCACGTACTTCGTGTCAA
JMSF017M12+ AGCAGACAATNCCATACGCCCCTNGACCAATGGGCTTGATTGGCANGTACTCCGTGTCAA
JMFS082D08+ AGCAGACAATACCATACGCCCCTCGACCAATGGGCTTGATTGGCACGTACTTCGTGTCAA
____________________________________________________________
consensus AGCAGACAATACCATACGCCCCTCGACCAATGGGCTTGATTGGCACGTACTTCGTGTCAA
. : . : . : . : . : . :
JMFF050M07+ TCTCAAACAACGTTTGCCACATAGAATAGTAATGCTTCCCAGGAGTCATAACTCCATTCG
JMSF004G18+ TCTCAAACAACGTTTGCCACATAGAATAGTAATGCTTCCCAGGAGTCATAACTCCATTCG
JMSF003G18+ TTGCCACATAGAATAGTAATGCTTCCCAGGAGTCATAACTCCATTCG
JMFF039B10+ TCTCAAACAACGTTTGCCACATAGAATAGTAATGCTTCCCAGGAGTCATAACTCCATTCG
JMSF017M12+ TCTCAAACAACGTTTGCCACATAGAATAGTAATGCTTCCCAGGAGTCATAACTCCATTCG
JMFS082D08+ TCTCAAACAACGTTTGCCACATAGAATAGTAATGCTTCCCAGGAGTCATAACTCCATTCG
____________________________________________________________
consensus TCTCAAACAACGTTTGCCACATAGAATAGTAATGCTTCCCAGGAGTCATAACTCCATTCG
. : . : . : . : . : . :
JMFF050M07+ GAGGATCAACAGGGGTAGCCGCCATTTCCTTTCGACAACAAATTCTCCTCGAAACCCTTC
JMSF004G18+ GAGGATCAACAGGGGTAGCCGCCATTTCCTTTCGACAACAAATTCTCCTCGAAACCCTTC
JMSF003G18+ GAGGATCAACAGGGGTAGCCGCCATTTCCTTTCGACAACAAATTCTCCTCGAAACCCTTC
JMFF039B10+ GAGGATCAACAGGGGTAGCCGCCATTTCCTTTCGACAACAAATTCTCCTCGAAACCCTTC
JMSF017M12+ GAGGATCAACAGGGGTAGCCGCCATTTCCTTTNGACAACAAATTCTCCTNGAAACCCTTC
JMFS082D08+ GAGGATCAACAGGGGTAGCCGCCATTTCCTTTCGACAACAAATTCTCCTCGAAACCCTTC
____________________________________________________________
consensus GAGGATCAACAGGGGTAGCCGCCATTTCCTTTCGACAACAAATTCTCCTCGAAACCCTTC
. : . : . : . : . : . :
JMFF050M07+ ACTGTCGTCTCCTCAGCTCCATCTAAAGATCGAATTTTCCAACGAGCTTCAAACCTTTTC
JMSF004G18+ ACTGTCGTCTCCTCAGCTCCATCTAAAGATCGAATTTTCCAACGAGCTTCAAACCTTTTC
JMSF003G18+ ACTGTCGTCTCCTCAGCTCCATCTAAAGATCGAATTTTCCAACGAGCTTCAAACCTTTTC
JMFF039B10+ ACTGTCGTCTCCTCAGCTCCATCTAAAGATCGAATTTTCCAACGAGCTTCAAACCTTTTC
JMSF017M12+ ACTGTCGTCTCCTCAGCTCCATCTAAAGATCGAATTTTCC
JMFS082D08+ ACTGTCGTCTCCTCAGCTCCATCTAAAGATCGAATTTTCCAACGAGCTTCAAACCTTTTC
____________________________________________________________
consensus ACTGTCGTCTCCTCAGCTCCATCTAAAGATCGAATTTTCCAACGAGCTTCAAACCTTTTC
. : . : . : . : . : . :
JMFF050M07+ CCAGATTAAACTCCAATATCTCAGGAAATTCCCGTCCGGTCCCAGCAAACTCGAATTCCC
JMSF004G18+ CCAGATTAAACTCCAATATCTCAGGAAATTCCCGTCCGGTCCCAGCAAACTCGAATTCCC
JMSF003G18+ CCAGATTAAACTCCAATATCTCAGGAAATTCCCGTCCGGTCCCAGCAAACTCGAATTCCC
JMFF039B10+ CCAGATTAAACTCCAATATCTCAGGAAATTCCCGTCCGGTCCCAGCAAACTCGAATTCCC
JMFS082D08+ CCAGATTAAACTCCAATATCTCAGGAAATTCCCGTCCGGTCCCAGCAAACTCGAATTCCC
____________________________________________________________
consensus CCAGATTAAACTCCAATATCTCAGGAAATTCCCGTCCGGTCCCAGCAAACTCGAATTCCC
. : . : . : . : . : . :
JMFF050M07+ CAGTGTTAGTCACTAAAAAATCCTCAACCTTTGAGATAACCCAAGTTAATTAGCCCAGAA
JMSF004G18+ CAGTGTTAGTCACTAAAAAATCCTCAACCTTTGAGATAACCCAAGTTAATTAGCCCAGAA
JMSF003G18+ CAGTGTTAGTCACTAAAAAATCCTCAACCTTTGAGATAACCCAAGTTAATTAGCCCAGAA
JMFF039B10+ CAGTGTTAGTCACTAAAAAATCCTCAACCTTTGAGATAACCCAAGTTAATTAGCCCAGAA
JMFS082D08+ CAGTGTTAGTCACTAAAAAATCCTCAACCTTTGAGATAACCCAAGTTAATTAGCCCAGAA
____________________________________________________________
consensus CAGTGTTAGTCACTAAAAAATCCTCAACCTTTGAGATAACCCAAGTTAATTAGCCCAGAA
. : . : . : . : . : . :
JMFF050M07+ AACAATTTGATGGCGCCTTAACGAGTCAGATCAGAAGGATCTAAAACAGATTAATTGCCC
JMSF004G18+ AACAATTTGATGGCGCCTTAACGAGTCAGATCAGAAGGATCTAAAACAGATTAATTGCCC
JMSF003G18+ AACAATTTGATGGCGCCTTAACGAGTCAGATCAGAAGGATCTAAAACAGATTAATTGCCC
JMFF039B10+ AACAATTTGATGGCGCCTTAACGAGTCAGATCAGAAGGATCTAAAACAGATTAATTGCCC
JMFS082D08+ AACAATTTGATGGCGCCTTAACGAGTCAGATCAGAAGGATCTAAAACAGATTAATTGCCC
____________________________________________________________
consensus AACAATTTGATGGCGCCTTAACGAGTCAGATCAGAAGGATCTAAAACAGATTAATTGCCC
. : . : . : . : . : . :
JMFF050M07+ TAAACATTTCCCCGGCTCCCACAGTAAACGGGTCACTTTACGTCTGTACCC
JMSF004G18+ TAAACATTTCCCCGGCTCCCACAGTAAACGGGTCACTTTACGTCTGTACCCGAACTTTTA
JMSF003G18+ TAAACATTTCCCCGGCTCCCACAGTAAACGGGTCACTTTACGTCTGTACCCGAACTTTTA
JMFF039B10+ TAAACATTTCCCCGGCTCCCACAGTAAACGGGTCACTTTACGTCTGTACCC
JMFS082D08+ TAAACATTTCCCCGGCTCCCACAGTAAACGGGTCACTTTACGTCTGTACCCGAACTTTTA
____________________________________________________________
consensus TAAACATTTCCCCGGCTCCCACAGTAAACGGGTCACTTTACGTCTGTACCCGAACTTTTA
. : . : . : . : . : . :
JMSF004G18+ CGGTATATGCTCCAATAGATATCCTTGCCAAAC
JMSF003G18+ CGGTATATGCTCCAATAGATATCCTTGCCAAAC
JMFS082D08+ CGGTATATGCTCCAATAGATATCCTTGCCAAACGCCTAGTGCCCACGACAAGATATTTGA
____________________________________________________________
consensus CGGTATATGCTCCAATAGATATCCTTGCCAAACGCCTAGTGCCCACGACAAGATATTTGA