| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF048H18 | Sequence | 489 | 001939 (7) | ref|XP_004238035.1| | 79.7 | PREDICTED: uncharacterized protein LOC101266631 [Solanum lycopersicum] | 431 | 009833 (2) | ref|XP_008353967.1| | 57.4 | PREDICTED: uncharacterized protein LOC103417568 [Malus domestica] |
| JMFS074B03 | Sequence | 627 | 001939 (7) | ref|XP_004238035.1| | 84.3 | PREDICTED: uncharacterized protein LOC101266631 [Solanum lycopersicum] | |||||
| JMFS096G12 | Sequence | 609 | 001939 (7) | ref|XP_004238035.1| | 84.3 | PREDICTED: uncharacterized protein LOC101266631 [Solanum lycopersicum] | |||||
| JMFS124E02 | Sequence | 576 | 001939 (7) | ref|XP_004238035.1| | 79.7 | PREDICTED: uncharacterized protein LOC101266631 [Solanum lycopersicum] | |||||
| JMFS126C03 | Sequence | 581 | 001939 (7) | ref|XP_004238035.1| | 104 | PREDICTED: uncharacterized protein LOC101266631 [Solanum lycopersicum] | |||||
| JMFS149G03 | Sequence | 626 | 001939 (7) | ref|XP_004238035.1| | 89.7 | PREDICTED: uncharacterized protein LOC101266631 [Solanum lycopersicum] | |||||
| JMSF018O11 | Sequence | 454 | 001939 (7) | ref|XP_004238035.1| | 108 | PREDICTED: uncharacterized protein LOC101266631 [Solanum lycopersicum] | 734 | 009833 (2) | ref|XP_004238035.1| | 357 | PREDICTED: uncharacterized protein LOC101266631 [Solanum lycopersicum] |
This contig is upended
. : . : . : . : . : . :
JMFS126C03+ TCACACTCTGCATACAAACNCCGCAGCTATTCCTGGAAAGACGGAGGGTGTTCTTG
____________________________________________________________
consensus TCACACTCTGCATACAAACNCCGCAGCTATTCCTGGAAAGACGGAGGGTGTTCTTG
. : . : . : . : . : . :
JMFS126C03+ AGGATTGAAAAGGGGGAATCTGGGCGACGCAGGGTTAGAAGCAAGGCGAGTTCTGGGAGT
____________________________________________________________
consensus AGGATTGAAAAGGGGGAATCTGGGCGACGCAGGGTTAGAAGCAAGGCGAGTTCTGGGAGT
. : . : . : . : . : . :
JMSF018O11+ GGAAGAATTAGATTTCGGGGTGGTGGTTTTGCAATGGAGGCTTGGGCTGACGAGATT
JMFS126C03+ CTTGGAAGAATTAGATTTCGGGGTGGTGGTTTTGCAATGGAGGCTTGGGCTGACGAGATT
JMFS149G03+ GGGCTGACGAGATT
____________________________________________________________
consensus CTTGGAAGAATTAGATTTCGGGGTGGTGGTTTTGCAATGGAGGCTTGGGCTGACGAGATT
. : . : . : . : . : . :
JMSF018O11+ ATCACTGTTTTCATTCGAAGCCGCGGCGGTTCTGCAACGCAGACGAGGCGTAGTAGAAGC
JMFS126C03+ ATCACTGTTTTCATTCGAAGCCGCGGCGGTTCTGCAACGCAGACGAGGCGTAGTAGAAGC
JMFS149G03+ ATCACTGTTTTCATTCGAAGCCGCGGCGGTTCTGCAACGCAGACGAGGCGTAGTAGAAGC
JMFS096G12+ GCAACGCAGACGAGGCGTAGTAGAAGC
JMFF048H18+ TAGTAGAAGC
JMFS124E02+ CGAGGCGTAGTAGAAGC
JMFS074B03+ GCAACGCAGACGAGGCGTAGTAGAAGC
____________________________________________________________
consensus ATCACTGTTTTCATTCGAAGCCGCGGCGGTTCTGCAACGCAGACGAGGCGTAGTAGAAGC
. : . : . : . : . : . :
JMSF018O11+ GCTGCTGCTACCACTTTTACTGTTATTATTCAAAAAACCCAGTTTTGCACAGCTTCTTGG
JMFS126C03+ GCTGCTGCTACCACTTTTACTGTTATTATTCAAAAAACCCAGTTTTGCACAGCTTCTTGG
JMFS149G03+ GCTGCTGCTACCACTTTTACTGTTATTATTCAAAAAACCCAGTTTTGCACAGCTTCTTGG
JMFS096G12+ GCTGCTGCTACCACTTTTACTGTTATTATTCAAAAAACCCAGTTTTGCACAGCTTCTTGG
JMFF048H18+ GCTGCTGCTACCACTTTTACTGTTATTATTCAAAAAACCCAGTTTTGCACAGCTTCTTGG
JMFS124E02+ GCTGCTGCTACCACTTTTACTGTTATTATTCAAAAAACCCAGTTTTGCACAGCTTCTTGG
JMFS074B03+ GCTGCTGCTACCACTTTTACTGTTATTATTCAAAAAACCCAGTTTTGCACAGCTTCTTGG
____________________________________________________________
consensus GCTGCTGCTACCACTTTTACTGTTATTATTCAAAAAACCCAGTTTTGCACAGCTTCTTGG
. : . : . : . : . : . :
JMSF018O11+ ACTGGGACTAGGGCTCGATTGTGTGTGTTCATGATCTTGATAAAGATGTTTATCAACGAA
JMFS126C03+ ACTGGGACTAGGGCTCGATTGTGTGTGTTCATGATCTTGATAAAGATGTTTATCAACGAA
JMFS149G03+ ACTGGGACTAGGGCTCGATTGTGTGTGTTCATGATCTTGATAAAGATGTTTATCAACGAA
JMFS096G12+ ACTGGGACTAGGGCTCGATTGTGTGTGTTCATGATCTTGATAAAGATGTTTATCAACGAA
JMFF048H18+ ACTGGGACTAGGGCTCGATTGTGTGTGTTCATGATCTTGATAAAGATGTTTATCAACGAA
JMFS124E02+ ACTGGGACTAGGGCTCGATTGTGTGTGTTCATGATCTTGATAAAGATGTTTATCAACGAA
JMFS074B03+ ACTGGGACTAGGGCTCGATTGTGTGTGTTCATGATCTTGATAAAGATGTTTATCAACGAA
____________________________________________________________
consensus ACTGGGACTAGGGCTCGATTGTGTGTGTTCATGATCTTGATAAAGATGTTTATCAACGAA
. : . : . : . : . : . :
JMSF018O11+ TTTGGGTTCTCTATCTCGTGGGATAGTAGTGCAGAAAGCCCTTCTCCAACCAGTCCCCAT
JMFS126C03+ TTTGGGTTCTCTATCTCGTGGGATAGTAGTGCAGAAAGCCCTTCTCCAACCAGTCCCCAT
JMFS149G03+ TTTGGGTTCTCTATCTCGTGGGATAGTAGTGCAGAAAGCCCTTCTCCAACCAGTCCCCAT
JMFS096G12+ TTTGGGTTCTCTATCTCGTGGGATAGTAGTGCAGAAAGCCCTTCTCCAACCAGTCCCCAT
JMFF048H18+ TTTGGGTTCTCTATCTCGTGGGATAGTAGTGCAGAAAGCCCTTCTCCAACCAGTCCCCAT
JMFS124E02+ TTTGGGTTCTCTATCTCGTGGGATAGTAGTGCAGAAAGCCCTTCTCCAACCAGTCCCCAT
JMFS074B03+ TTTGGGTTCTCTATCTCGTGGGATAGTAGTGCAGAAAGCCCTTCTCCAACCAGTCCCCAT
____________________________________________________________
consensus TTTGGGTTCTCTATCTCGTGGGATAGTAGTGCAGAAAGCCCTTCTCCAACCAGTCCCCAT
. : . : . : . : . : . :
JMSF018O11+ TTCTCAACAAACAAACCAAAAAAAGAACGATCTTTATGATTATACAAGAGGAAAAGGAGG
JMFS126C03+ TTCTCAACAAACAAACCAAAAAAAGAACGATCTTTATGATTATACAAGAGGAAAAGGAGG
JMFS149G03+ TTCTCAACAAACAAACCAAAAAAAGAACGATCTTTATGATTATACAAGAGGAAAAGGAGG
JMFS096G12+ TTCTCAACAAACAAACCAAAAAAAGAACGATCTTTATGATTATACAAGAGGAAAAGGAGG
JMFF048H18+ TTCTCAACAAACAAACCAAAAAAAGAACGATCTTTATGATTATACAAGAGGAAAAGGAGG
JMFS124E02+ TTCTCAACAAACAAACCAAAAAAAGAACGATCTTTATGATTATACAAGAGGAAAAGGAGG
JMFS074B03+ TTCTCAACAAACAAACCAAAAAAAGAACGATCTTTATGATTATACAAGAGGAAAAGGAGG
____________________________________________________________
consensus TTCTCAACAAACAAACCAAAAAAAGAACGATCTTTATGATTATACAAGAGGAAAAGGAGG
. : . : . : . : . : . :
JMSF018O11+ ATTGCAGGGATGGATCTGAGGAAGGTGACAGAGAAGACAAAATGGTAAGAGTTTGGAAGA
JMFS126C03+ ATTGCAGGGATGGATCTGAGGAAGGTGACAGAGAAGACAAAATGGTAAGAGTTTGGAAGA
JMFS149G03+ ATTGCAGGGATGGATCTGAGGAAGGTGACAGAGAAGACAAAATGGTAAGAGTTTGGAAGA
JMFS096G12+ ATTGCAGGGATGGATCTGAGGAAGGTGACAGAGAAGACAAAATGGTAAGAGTTTGGAAGA
JMFF048H18+ ATTGCAGGGATGGATCTGAGGAAGGTGACAGAGAAGACAAAATGGTAAGAGTTTGGAAGA
JMFS124E02+ AT---AGGGATGGATCTGAGGAAGGTGACAGAGAAGACAAAATGGTAAGAGTTTGGAAGA
JMFS074B03+ ATTGCAGGGATGGATCTGAGGAAGGTGACAGAGAAGACAAAATGGTAAGAGTTTGGAAGA
____________________________________________________________
consensus ATTGCAGGGATGGATCTGAGGAAGGTGACAGAGAAGACAAAATGGTAAGAGTTTGGAAGA
. : . : . : . : . : . :
JMSF018O11+ AGAAGAAGAAGATGATGATAAAGAGGATGAGAGTAT
JMFS126C03+ AGAAGAAGAAGATGATGATAAAGAGGATGAGAGTATGGGATCAAA
JMFS149G03+ AGAAGAAGAAGATGATGATAAAGAGGATGAGAGTATGGGATCAAATGAAAGATGAGAGGA
JMFS096G12+ AGAAGAAGAAGATGATGATAAAGAGGATGAGAGTATGGGATCAAATGAAAGATGAGAGGA
JMFF048H18+ AGAAGAAGAAGATGATGATAAAGAGGATGAGAGTATGGGATCAAATGAAAGATGAGAGGA
JMFS124E02+ AGAAGAAGAAGATGATGATAAAGAGGATGAGAGTATGGGATCAAATGAAAGATGAGAGGA
JMFS074B03+ AGAAGAAGAAGATGATGATAAAGAGGATGAGAGTATGGGATCAAATGAAAGATGAGAGGA
____________________________________________________________
consensus AGAAGAAGAAGATGATGATAAAGAGGATGAGAGTATGGGATCAAATGAAAGATGAGAGGA
. : . : . : . : . : . :
JMFS149G03+ TGGAATATAAATGGCAGTAGAGACAAACGACAGGGGATTAAAGATAGAGTAATCCCAGCT
JMFS096G12+ TGGAATATAAATGGCAGTAGAGACAAACGACAGGGGATTAAAGATAGAGTAATCCCAGCT
JMFF048H18+ TGGAATATAAATGGCAGTAGAGACAAACGACAGGGGATTAAAGATAGAGTAATCCCAGCT
JMFS124E02+ TGGAATATAAATGGCAGTAGAGACAAACGACAGGGGATTAAAGATAGAGTAATCCCAGCT
JMFS074B03+ TGGAATATAAATGGCAGTAGAGACAAACGACAGGGGATTAAAGATAGAGTAATCCCAGCT
____________________________________________________________
consensus TGGAATATAAATGGCAGTAGAGACAAACGACAGGGGATTAAAGATAGAGTAATCCCAGCT
. : . : . : . : . : . :
JMFS149G03+ CAGAGTCAGAGGCTCAATTTCTTGCTTTCTTTCTCTGGTCCCTG
JMFS096G12+ CAGAGTCAGAGGCTCAATTTCTTGCTTTCTTTCTCTGGTCCCTG
JMFF048H18+ CAGAGTCAGAGGCTCAATTTCTTGCTTTCTTTCTCTGGTCCCTG
JMFS124E02+ CAGAGTCAGAGGCTCAATTTCTTGCTTTCTTTCTCTGGTCCCTG
JMFS074B03+ CAGAGTCAGAGGCTCAATTTCTTGCTTTCTTTCTCTGGTCCCTGXXXXXXXXXXXXXXXX
____________________________________________________________
consensus CAGAGTCAGAGGCTCAATTTCTTGCTTTCTTTCTCTGGTCCCTGNNNNNNNNNNNNNNNN
. : . : . : . : . : . :
JMFS074B03+ XXXXXXXXXXXXXXXXXXXXXXXXGTTTGTATGTATTGATCACCAGACCCAAAAAGGCCG
____________________________________________________________
consensus NNNNNNNNNNNNNNNNNNNNNNNNGTTTGTATGTATTGATCACCAGACCCAAAAAGGCCG
. : . : . : . : . : . :
JMFS074B03+ CTGCATCTAAAGGAAGGATTGAGATCTGCTTCTTTCTACTTCTCTCTCCCTTGGTATCAT
____________________________________________________________
consensus CTGCATCTAAAGGAAGGATTGAGATCTGCTTCTTTCTACTTCTCTCTCCCTTGGTATCAT