Contig 001933:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFN001G10Sequence524001933 (3)ref|XP_006365054.1|372PREDICTED: uncharacterized protein LOC102595305 [Solanum tuberosum]
JMFS038G05Sequence622001933 (3)ref|XP_009765250.1|2e-131PREDICTED: serine/threonine-protein kinase pakA-like [Nicotiana sylvestris] ref
JMFS070E11Sequence633001933 (3)ref|XP_009603644.1|432PREDICTED: uncharacterized protein LOC104098578 [Nicotiana tomentosiformis]

Alignment

This contig is upended


. : . : . : . : . : . :
JMFS038G05+ AAAGGCCATT
                      ____________________________________________________________
consensus AAAGGCCATT
 
. : . : . : . : . : . :
JMFS038G05+ ACTTGGATTGCTGGGTCTGAGCCAGGTGACCTTGTGGTCTACTAGGACAGGCTACTGACA
                      ____________________________________________________________
consensus ACTTGGATTGCTGGGTCTGAGCCAGGTGACCTTGTGGTCTACTAGGACAGGCTACTGACA
 
. : . : . : . : . : . :
JMFS038G05+ TGGCACGTAAGCGTCTAGCAATTTCGGTGAAGGATGGCCGAGCTGCGGGGTCCGGAGCCC
JMFN001G10+ GGGTCCGGAGCCC
                      ____________________________________________________________
consensus TGGCACGTAAGCGTCTAGCAATTTCGGTGAAGGATGGCCGAGCTGCGGGGTCCGGAGCCC
 
. : . : . : . : . : . :
JMFS038G05+ AGCACTGTTCCATCAGCATTCTCCATTCAGGGTCACAGAAGTTTGGTATGTTTGGCCGTA
JMFN001G10+ AGCACTGTTCCATCAGCATTCTCCATTCAGGGTCACAGAAGTTTGGTATGTTTGGCCGTA
                      ____________________________________________________________
consensus AGCACTGTTCCATCAGCATTCTCCATTCAGGGTCACAGAAGTTTGGTATGTTTGGCCGTA
 
. : . : . : . : . : . :
JMFS038G05+ AGGTGTTGTTCACAATGCCACCTATGATCGCTCCATAATGCATATTGGCATAAGGTTCTT
JMFN001G10+ AGGTGTTGTTCACAATGCCACCTATGATCGCTCCATAATGCATATTGGCATAAGGTTCTT
                      ____________________________________________________________
consensus AGGTGTTGTTCACAATGCCACCTATGATCGCTCCATAATGCATATTGGCATAAGGTTCTT
 
. : . : . : . : . : . :
JMFS038G05+ CACCGGTAAGAATTTCCCAAAGTACAATCCCAAAGGAGAAGACATCAACCTTCTCAGAAA
JMFN001G10+ CACCGGTAAGAATTTCCCAAAGTACAATCCCAAAGGAGAAGACATCAACCTTCTCAGAAA
JMFS070E11+ TCCCAAAGGAGAAGACATCAACCTTCTCAGAAA
                      ____________________________________________________________
consensus CACCGGTAAGAATTTCCCAAAGTACAATCCCAAAGGAGAAGACATCAACCTTCTCAGAAA
 
. : . : . : . : . : . :
JMFS038G05+ CTTTGTTGCTGCTCCCATTTAATAGCTCAGGAGCCATCCATGGAAGAGTTCCCCTTACAC
JMFN001G10+ CTTTGTTGCTGCTCCCATTTAATAGCTCAGGAGCCATCCATGGAAGAGTTCCCCTTACAC
JMFS070E11+ CTTTGTTGCTGCTCCCATTTAATAGCTCAGGAGCCATCCATGGAAGAGTTCCCCTTACAC
                      ____________________________________________________________
consensus CTTTGTTGCTGCTCCCATTTAATAGCTCAGGAGCCATCCATGGAAGAGTTCCCCTTACAC
 
. : . : . : . : . : . :
JMFS038G05+ CACCAGTGACCAAGGTATTTCTCTTGATTTTGGACAGCCCAAAATCACCGACCTTGCAAA
JMFN001G10+ CACCAGTGACCAAGGTATTTCTCTTGATTTTGGACAGCCCAAAATCACCGACCTTGCAAA
JMFS070E11+ CACCAGTGACCAAGGTATTTCTCTTGATTTTGGACAGCCCAAAATCACCGACCTTGCAAA
                      ____________________________________________________________
consensus CACCAGTGACCAAGGTATTTCTCTTGATTTTGGACAGCCCAAAATCACCGACCTTGCAAA
 
. : . : . : . : . : . :
JMFS038G05+ TTGGCCGAGAAGGATCCTTCAAGTTGACGAGCAAGTTGTCACATTTCAAGTCAAAATGCA
JMFN001G10+ TTGGCCGAGAAGGATCCTTCAAGTTGACGAGCAAGTTGTCACATTTCAAGTCAAAATGCA
JMFS070E11+ TTGGCCGAGAAGGATCCTTCAAGTTGACGAGCAAGTTGTCACATTTCAAGTCAAAATGCA
                      ____________________________________________________________
consensus TTGGCCGAGAAGGATCCTTCAAGTTGACGAGCAAGTTGTCACATTTCAAGTCAAAATGCA
 
. : . : . : . : . : . :
JMFS038G05+ CAATATTTTTTGAATGCAAATATTCCATTCCAAATGCTGCATCTGTTGCGATGATGAGTT
JMFN001G10+ CAATATTTTTTGAATGCAAATATTCCATTCCAAATGCTGCATCTGTTGCGATGATGAGTT
JMFS070E11+ CAATATTTTTTGAATGCAAATATTCCATTCCAAATGCTGCATCTGTTGCGATGATGAGTT
                      ____________________________________________________________
consensus CAATATTTTTTGAATGCAAATATTCCATTCCAAATGCTGCATCTGTTGCGATGATGAGTT
 
. : . : . : . : . : . :
JMFS038G05+ TCTTGCGACGATCAAGGTGTCTGTCCTTGCAAAGCAAAACATGTCTGAGGGACCCATTCA
JMFN001G10+ TCTTGCGACGATCAAGGTGTCTGTCCTTGCAAAGCAAAACATGTCTGAGGGACCCATTCA
JMFS070E11+ TCTTGCGACGATCAAGGTGTCTGTCCTTGCAAAGCAAAACATGTCTGAGGGACCCATTCA
                      ____________________________________________________________
consensus TCTTGCGACGATCAAGGTGTCTGTCCTTGCAAAGCAAAACATGTCTGAGGGACCCATTCA
 
. : . : . : . : . : . :
JMFS038G05+ CCATGAACTCTG
JMFN001G10+ CCATGAACTCTGTGACGGTAGCAAGAGTTGC
JMFS070E11+ CCATGAACTCTGTGACGGTAGCAAGAGTTGCTCCAGGCCCATCTTGCACCACACCATAAA
                      ____________________________________________________________
consensus CCATGAACTCTGTGACGGTAGCAAGAGTTGCTCCAGGCCCATCTTGCACCACACCATAAA
 
. : . : . : . : . : . :
JMFS070E11+ ATGCCACCACATTTGGATGGTGAAGCTTTGAGAGAATATCAGCCTCACGCCAAAACTCAA
                      ____________________________________________________________
consensus ATGCCACCACATTTGGATGGTGAAGCTTTGAGAGAATATCAGCCTCACGCCAAAACTCAA
 
. : . : . : . : . : . :
JMFS070E11+ CAGTCAGCCTCTCCTGCTCTGATGATCGGCCAGTGAAGCAACTTTTCTTTATTCTCTTGA
                      ____________________________________________________________
consensus CAGTCAGCCTCTCCTGCTCTGATGATCGGCCAGTGAAGCAACTTTTCTTTATTCTCTTGA
 
. : . : . : . : . : . :
JMFS070E11+ TGGCAACATCTGTTCCTCTCCATTTGCCATGATAGACAGTGCCAAATGTTCCAGAACCCA
                      ____________________________________________________________
consensus TGGCAACATCTGTTCCTCTCCATTTGCCATGATAGACAGTGCCAAATGTTCCAGAACCCA
 
. : . : . : . : . : . :
JMFS070E11+ ATTCCTTCAACTCTTCAAGGTCTTCATTTTTTATGATCTGCAAGGAGTGTATATCAAAAC
                      ____________________________________________________________
consensus ATTCCTTCAACTCTTCAAGGTCTTCATTTTTTATGATCTGCAAGGAGTGTATATCAAAAC