Contig 001922:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS053D10Sequence603001922 (2)ref|XP_007013140.1|2e-31Uncharacterized protein isoform 1 [Theobroma cacao] ref|XP_007013141.1| Uncharac
JMFS054D04Sequence596001922 (2)ref|XP_007013140.1|2e-30Uncharacterized protein isoform 1 [Theobroma cacao] ref|XP_007013141.1| Uncharac

Alignment

This contig is upended


. : . : . : . : . : . :
JMFS053D10+ ATC
                      ____________________________________________________________
consensus ATC
 
. : . : . : . : . : . :
JMFS053D10+ GAGAGCTCCTTTCATCAAGTCCTTAGCAACCTCCTTCGACTTCCCGTCTAACCCACCTCC
JMFS054D04+ GCTCCTTTCAACAAGTCCTTAGCAACCTCCTTCGACTTCCCGTCTAACCCACCTCC
                      ____________________________________________________________
consensus GAGAGCTCCTTTCATCAAGTCCTTAGCAACCTCCTTCGACTTCCCGTCTAACCCACCTCC
 
. : . : . : . : . : . :
JMFS053D10+ CTTCGACCACGACTCAATCACTCGACTCAGCTTCTGAGCTCCTCTCGATACCTCCATGAG
JMFS054D04+ CTTCGACCACGACTCAATCACTCGACTCAGCTTCTGAGCTCCTCTCGATACCTCCATGAG
                      ____________________________________________________________
consensus CTTCGACCACGACTCAATCACTCGACTCAGCTTCTGAGCTCCTCTCGATACCTCCATGAG
 
. : . : . : . : . : . :
JMFS053D10+ CTGGACAGAACACGAGGCGTTTAACTCATCTGCAGACCCTTGGCACACCCTCTTTTCGCG
JMFS054D04+ CTGGACAGAACACGAGGCGTTTAACTCATCTGCAGACCCTTGGCACACCCTTTCTTCGCG
                      ____________________________________________________________
consensus CTGGACAGAACACGAGGCGTTTAACTCATCTGCAGACCCTTGGCACACCCTTTTTTCGCG
 
. : . : . : . : . : . :
JMFS053D10+ TTCTTTCTTCACACTCATACCTTCACGAACTCCTCGTTTTACAAGCTTATCATCATCCAC
JMFS054D04+ TTCTTTCTTCACACTCATACCTTCACGAACTCCTCGTTTTACAAGCTTATCATCATCCAC
                      ____________________________________________________________
consensus TTCTTTCTTCACACTCATACCTTCACGAACTCCTCGTTTTACAAGCTTATCATCATCCAC
 
. : . : . : . : . : . :
JMFS053D10+ CATCTTCGGGAGCTCGGTCTTGGACCTCCTAATCCTATTGCATTCAACTACACCCCTAGG
JMFS054D04+ CATCTTCGGGAGCTCGGTCTTGGACCTCCTAATCCTATTGCATTCAACTACACCCCTAGG
                      ____________________________________________________________
consensus CATCTTCGGGAGCTCGGTCTTGGACCTCCTAATCCTATTGCATTCAACTACACCCCTAGG
 
. : . : . : . : . : . :
JMFS053D10+ ATCATCACACGTCAGAAATGATCTGTATAACACAGATCTCGGCCTGTCTTGTGGCATATT
JMFS054D04+ ATCATCACACGTCAGAAATGATCTGTATAACACAGATCTCGGCCTGTCTTGTGGCATATT
                      ____________________________________________________________
consensus ATCATCACACGTCAGAAATGATCTGTATAACACAGATCTCGGCCTGTCTTGTGGCATATT
 
. : . : . : . : . : . :
JMFS053D10+ CTGGACTATTTCTATCACACAAATTTCATAGAAACATTCAAAGGCTTATTCAAATTCTGC
JMFS054D04+ CTGTACTATTTCTATCACACAAATTTCATAGAAACATTCAAAGGCTTATTCAAATTCTGC
                      ____________________________________________________________
consensus CTGTACTATTTCTATCACACAAATTTCATAGAAACATTCAAAGGCTTATTCAAATTCTGC
 
. : . : . : . : . : . :
JMFS053D10+ CCAGTGGATTCACCTCAACACATATATATATATCTCAGCCAAGCTGTCAAAAGCTTGATA
JMFS054D04+ CCAGTGGATTCACCTCAACACATATATATATATCTCAGCCAAGCTGTCAAAAGCTTGATA
                      ____________________________________________________________
consensus CCAGTGGATTCACCTCAACACATATATATATATCTCAGCCAAGCTGTCAAAAGCTTGATA
 
. : . : . : . : . : . :
JMFS053D10+ TGATGATGTAGACACAAAACACAGCTCTTTTTCAATCTTCAGCTTTAAAATACTGACACA
JMFS054D04+ TGATGATGTAGACACAAAACACAGCTCTTTTTCAATCTTCAGCTTTAAAATACTGACACA
                      ____________________________________________________________
consensus TGATGATGTAGACACAAAACACAGCTCTTTTTCAATCTTCAGCTTTAAAATACTGACACA
 
. : . : . : . : . : . :
JMFS053D10+ CTCTTTTTTGGCTCCTGATGGATAAAAACAGAATCTTTGATCAACCCAATTCTCCTCCTT
JMFS054D04+ CTCTTTTTTGGCTCCTGATGGATAAAAACAGAATCTTTGATCAACCCAATTCTCCTCCTT
                      ____________________________________________________________
consensus CTCTTTTTTGGCTCCTGATGGATAAAAACAGAATCTTTGATCAACCCAATTCTCCTCCTT