clone | 5'-sequence | 3'-sequence | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
JMFN032B15 | Sequence | 623 | 001918 (7) | ref|XP_008445090.1| | 1e-125 | PREDICTED: COP9 signalosome complex subunit 5b-like [Cucumis melo] | |||||
JMFS047D10 | Sequence | 616 | 001918 (7) | ref|XP_008445090.1| | 5e-106 | PREDICTED: COP9 signalosome complex subunit 5b-like [Cucumis melo] | |||||
JMFS114C10 | Sequence | 553 | 001918 (7) | ref|XP_008445090.1| | 2e-102 | PREDICTED: COP9 signalosome complex subunit 5b-like [Cucumis melo] | |||||
JMSF005H05 | Sequence | 356 | 001918 (7) | ref|XP_004138765.1| | 9e-40 | PREDICTED: COP9 signalosome complex subunit 5a-like [Cucumis sativus] ref|XP_00 | 519 | 001918 (7) | emb|CBI37693.3| | 1e-79 | unnamed protein product [Vitis vinifera] |
JMSF014H08 | Sequence | 271 | 001918 (7) | ref|XP_008445090.1| | 2e-24 | PREDICTED: COP9 signalosome complex subunit 5b-like [Cucumis melo] | 770 | 001918 (7) | emb|CBI37693.3| | 4e-146 | unnamed protein product [Vitis vinifera] |
This contig is upended
. : . : . : . : . : . :
rJMSF005H05- TCAATTCGTATATCAGCCAC
rJMSF014H08- TCAATTCGTATATCAGCCAC
____________________________________________________________
consensus TCAATTCGTATATCAGCCAC
. : . : . : . : . : . :
rJMSF005H05- AGCCAACAATCCCACAACTTCCAATTAACAAAAAAAGAGATCTACATGAGATGAGGATAA
rJMSF014H08- AGCCAACAATCCCACAACTTCCAATTAACAAAAAAAGAGATCTACATGAGATGAGGATAA
____________________________________________________________
consensus AGCCAACAATCCCACAACTTCCAATTAACAAAAAAAGAGATCTACATGAGATGAGGATAA
. : . : . : . : . : . :
rJMSF005H05- CAACTAATGTAATATTGAGTTCATGTTTCAACCATGGGCTCAGGTCCTGAGGACTCTGTC
rJMSF014H08- CAACTAATGTAATATTGAGTTCATGTTTCAACCATGGGCTCAGGTCCTGAGGACTCTGTC
____________________________________________________________
consensus CAACTAATGTAATATTGAGTTCATGTTTCAACCATGGGCTCAGGTCCTGAGGACTCTGTC
. : . : . : . : . : . :
rJMSF005H05- CGGGATCTGTTTGACTGACGAACTGTGTTGAAAAGGATGTCCTTGATAACCTGTGACATT
rJMSF014H08- CGGGATCTGTTTGACTGACGAACTGTGTTGAAAAGGATGTCCTTGATAACCTGTGACATT
____________________________________________________________
consensus CGGGATCTGTTTGACTGACGAACTGTGTTGAAAAGGATGTCCTTGATAACCTGTGACATT
. : . : . : . : . : . :
rJMSF005H05- AGTCCATGAACCTGCTCCACAGTTATCTTTGCACTATCACAAGTTATCTTAGCAAGTTGA
rJMSF014H08- AGTCCATGAACCTGCTCCACAGTTATCTTTGCACTATCACAAGTTATCTTAGCAAGTTGA
____________________________________________________________
consensus AGTCCATGAACCTGCTCCACAGTTATCTTTGCACTATCACAAGTTATCTTAGCAAGTTGA
. : . : . : . : . : . :
rJMSF005H05- GATTCCTCCTCTTTCTTCCTCTGAGCAGGAGCTATCAAGGGTCCAAACCTTGAATGAGAT
rJMSF014H08- GATTCCTCCTCTTTCTTCCTCTGAGCAGGAGCTATCAAGGGTCCAAACCTTGAATGAGAT
____________________________________________________________
consensus GATTCCTCCTCTTTCTTCCTCTGAGCAGGAGCTATCAAGGGTCCAAACCTTGAATGAGAT
. : . : . : . : . : . :
rJMSF005H05- AGTTGGTTCTCAGCTTGTTCTAGCTTTTCAGCAAGATCTGAAATCTGTCCTGCAACATAG
rJMSF014H08- AGTTGGTTCTCAGCTTGTTCTAGCTTTTCAGCAAGATCTGAAATCTGTCCTGCAACATAG
____________________________________________________________
consensus AGTTGGTTCTCAGCTTGTTCTAGCTTTTCAGCAAGATCTGAAATCTGTCCTGCAACATAG
. : . : . : . : . : . :
rJMSF005H05- TCTCCATTCCCAAGTAAAGGAGAAGAAGAAAGTGTGTTCACCCAATACTTATTCCATAAA
rJMSF014H08- TCTCCATTCCCAAGTAAAGGAGAAGAAGAAAGTGTGTTCACCCAATACTTATTCCATAAA
____________________________________________________________
consensus TCTCCATTCCCAAGTAAAGGAGAAGAAGAAAGTGTGTTCACCCAATACTTATTCCATAAA
. : . : . : . : . : . :
rJMSF005H05- AGATCCAAAAGATGAGAGTCCAGAGATGATTTGAAATATGTGATGTCCAAAGAATAATAC
rJMSF014H08- AGATCCAAAAGATGAGAGTCCAGAGATGATTTGAAATATGTGATGTCCAAAGAATAATAC
____________________________________________________________
consensus AGATCCAAAAGATGAGAGTCCAGAGATGATTTGAAATATGTGATGTCCAAAGAATAATAC
. : . : . : . : . : . :
rJMSF005H05- TGTTTGCAGTGCACTCCAA
rJMSF014H08- TGTTTGCAGTGCACTCCAAAATCTTCAATTTTGTTCAAAGGGATGGTCTGATACTCAGAG
____________________________________________________________
consensus TGTTTGCAGTGCACTCCAAAATCTTCAATTTTGTTCAAAGGGATGGTCTGATACTCAGAG
. : . : . : . : . : . :
rJMSF014H08- ACTGGTTCATCTGGCGGCTTATATCCCTCTGGGTATGTTCTGAACGCACCAATCTCAACT
JMFN032B15+ GGTATGTTCTGAACGCACCAATCTCAACT
____________________________________________________________
consensus ACTGGTTCATCTGGCGGCTTATATCCCTCTGGGTATGTTCTGAACGCACCAATCTCAACT
. : . : . : . : . : . :
rJMSF014H08- TTCCCAGCAGAAACAGTTCTTGTTGGATCAATAACTACGGCTAGAAAGGGCTCCTGAAAT
JMFN032B15+ TTCCCAGCAGAAACAGTTCTTGTTGGATCAATAACTACGGCTAGAAAGGGCTCCTGAAAT
JMFS047D10+ AAAGGGCTCCTGAAAT
____________________________________________________________
consensus TTCCCAGCAGAAACAGTTCTTGTTGGATCAATAACTACGGCTAGAAAGGGCTCCTGAAAT
. : . : . : . : . : . :
rJMSF014H08- TGCTGGTTTAGCATTTGTGTAGAACCATCAATACCAGAAAGCCAGCATCCATAGCCAGGA
JMFN032B15+ TGCTGGTTTAGCATTTGTGTAGAAACATCAATACCAGAAAGCCAGCATCCATAGCCAGGA
JMFS114C10+ TGCTGGTTTAGCATTTGTGTAGAAACATCAATACCAGAAAGCCAGCATCCATAGCCAGGA
JMFS047D10+ TGCTGGTTTAGCATTTGTGTAGAAACATCAATACCAGAAAGCCAGCATCCATAGCCAGGA
____________________________________________________________
consensus TGCTGGTTTAGCATTTGTGTAGAAACATCAATACCAGAAAGCCAGCATCCATAGCCAGGA
. : . : . : . : . : . :
rJMSF014H08- TGGGAATGATACCATCCANCAACATTCTCC
JMFN032B15+ TGGGAATGATACCATCCAACAACATTCTCCAACCGACCAGCCTGTTTATTTGTTTGCGAA
JMFS114C10+ TGGGAATGATACCATCCAACAACATTCTCCAACCGACCAGCCTGTTTATTTGTTTGCGAA
JMFS047D10+ TGGGAATGATACCATCCAACAACATTCTCCAACCGACCAGCCTGTTTATTTGTTTGCGAA
____________________________________________________________
consensus TGGGAATGATACCATCCAACAACATTCTCCAACCGACCAGCCTGTTTATTTGTTTGCGAA
. : . : . : . : . : . :
JMFN032B15+ TAATCGACCATGTACTCATAAGCATCGGCCTGAGCATTAACCCTAGTCTCAGTGCCTTCG
JMFS114C10+ TAATCGACCATGTACTCATAAGCATCGGCCTGAGCATTAACCCTAGTCTCAGTGCCTTCG
JMFS047D10+ TAATCGACCATGTACTCATAAGCATCGGCCTGAGCATTAACCCTAGTCTCAGTGCCTTCG
____________________________________________________________
consensus TAATCGACCATGTACTCATAAGCATCGGCCTGAGCATTAACCCTAGTCTCAGTGCCTTCG
. : . : . : . : . : . :
JMFN032B15+ ACGGGAAGAGCGAAGGCATCCATGACAATGATGGCGTCGCCGTCGGTTTTCCCCTGCATA
JMFS114C10+ ACGGGAAGAGCGAAGGCATCCATGACAATGATGGCGTCGCCGTCGGTTTTCCCCTGCATA
JMSF005H05+ CCTGCATA
JMFS047D10+ ACGGGAAGAGCGAAGGCATCCATGACAATGATGGCGTCGCCGTCGGTTTTCCCCTGCATA
____________________________________________________________
consensus ACGGGAAGAGCGAAGGCATCCATGACAATGATGGCGTCGCCGTCGGTTTTCCCCTGCATA
. : . : . : . : . : . :
JMFN032B15+ AGGCCCATAACCTCGATGGTGCCACCGGAGCGCGCATGGACAACCATCTTGAGAAGCGCG
JMFS114C10+ AGGCCCATAACCTCGATGGTGCCACCGGAGCGCGCATGGACAACCATCTTGAGAAGCGCG
JMSF014H08+ AAGCGCG
JMSF005H05+ AGGCCCATAACCTCGATGGTGCCACCGGAGCGCGCATGGACAACCATCTTGAGAAGCGCG
JMFS047D10+ AGGCCCATAACCTCGATGGTGCCACCGGAGCGCGCATGGACAACCATCTTGAGAAGCGCG
____________________________________________________________
consensus AGGCCCATAACCTCGATGGTGCCACCGGAGCGCGCATGGACAACCATCTTGAGAAGCGCG
. : . : . : . : . : . :
JMFN032B15+ AGTGCGGAGATCTTGACGCGCTTGAAGTAGTGCGGATCGTTGGTCCATGGCTTCTCCTGC
JMFS114C10+ AGTGCGGAGATCTTGACGCGCTTGAAGTAGTGCGGATCGTTGGTCCATGGCTTCTCCTGC
JMSF014H08+ AGTGCGGAGATCTTGACGCGCTTGAAGTAGTGCGGATCGTTGGTCCATGGCTTCTCCTGC
JMSF005H05+ AGTGCGGAGATCTTGACGCGCTTGAAGTAGTGCGGATCGTTGGTCCATGGCTTCTCCTGC
JMFS047D10+ AGTGCGGAGATCTTGACGCGCTTGAAGTAGTGCGGATCGTTGGTCCATGGCTTCTCCTGC
____________________________________________________________
consensus AGTGCGGAGATCTTGACGCGCTTGAAGTAGTGCGGATCGTTGGTCCATGGCTTCTCCTGC
. : . : . : . : . : . :
JMFN032B15+ TGGAACTTGGTCTGCGCCGTCTCATCGTAGTAAAATATGGCGTCCGACGATGCCGAGGCG
JMFS114C10+ TGGAACTTGGTCTGCGCCGTCTCATCGTAGTAAAATATGGCGTCCGACGATGCCGAGGCG
JMSF014H08+ TGGAACTTGGTCTGCGCCGTCTCATCGTAGTAAAATATGGCGTCCGACGATGCCGAGGCG
JMSF005H05+ TGGAACTTGGTCTGCGCCGTCTCATCGTAGTAAAATATGGCGTCCGACGATGCCGAGGCG
JMFS047D10+ TGGAACTTGGTCTGCGCCGTCTCATCGTAGTAAAATATGGCGTCCGACGATGCCGAGGCG
____________________________________________________________
consensus TGGAACTTGGTCTGCGCCGTCTCATCGTAGTAAAATATGGCGTCCGACGATGCCGAGGCG
. : . : . : . : . : . :
JMFN032B15+ GCGGCGGAGTCGGCCGACGTCGGCGGCAAGTCCATTGTCTCAACGTTGTTCTCTATCTCC
JMFS114C10+ GCGGCGGAGTCGGCCGACGTCGGCGGCAAGTCCATTGTCTCAACGTTGTTCTCTATCTCC
JMSF014H08+ GCGGCGGAGTCGGCCGACGTCGGCGGCAAGTCCATTGTCTCAACGTTGTTCTCTATCTCC
JMSF005H05+ GCGGCGGAGTCGGCCGACGTCGGCGGCAAGTCCATTGTCTCAACGTTGTTCTCTATCTCC
JMFS047D10+ GCGGCGGAGTCGGCCGACGTCGGCGGCAAGTACATTGTCTCAACGTTGTTCTCTATCTCC
____________________________________________________________
consensus GCGGCGGAGTCGGCCGACGTCGGCGGCAAGTCCATTGTCTCAACGTTGTTCTCTATCTCC
. : . : . : . : . : . :
JMFN032B15+ CAGGTCTTCTGGGCAATTGCCGCCGATGATG
JMFS114C10+ CAGGTCTTCTGGGCAATTGCCGCCGATGATGTGAAAGAATCCATTAGGTGTAAAGCTCTT
JMSF014H08+ CAGGTCTTCTGGGCAATTGCCGCCGATGATGTGAAAGAATCCATTAGGTGTAAAGCTCTT
JMSF005H05+ CAGGTCTTCTGGGCAATTGCCGCCGATGATGTGAAAGAATCCATTAGGTGTAAAGCTCTT
JMFS047D10+ CAGGTCTTCTGGGCAATTGCCGCCGATGATGTGAAAGAATCCATTAGGTGTAAAGCTCTT
____________________________________________________________
consensus CAGGTCTTCTGGGCAATTGCCGCCGATGATGTGAAAGAATCCATTAGGTGTAAAGCTCTT
. : . : . : . : . : . :
JMFS114C10+ GGAGAGGACACGC
JMSF014H08+ GGAGAGGACACGCCACTATAACT
JMSF005H05+ GGAGAGGACACGCCACTATAACTGAGCTCTTGTGCAGTGCCGCCTGT
JMFS047D10+ GGAGAGGACACGCCACTATAACTGAGCTCTTGTGCAGTGCCGCCTGTAAATACATATATA
____________________________________________________________
consensus GGAGAGGACACGCCACTATAACTGAGCTCTTGTGCAGTGCCGCCTGTAAATACATATATA