clone | 5'-sequence | 3'-sequence | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
JMFS008D01 | Sequence | 611 | 001896 (8) | emb|CDP12689.1| | 7e-115 | unnamed protein product [Coffea canephora] | |||||
JMFS018G01 | Sequence | 503 | 001896 (8) | emb|CDP12689.1| | 7e-104 | unnamed protein product [Coffea canephora] | |||||
JMFS021A08 | Sequence | 615 | 001896 (8) | ref|XP_011080456.1| | 5e-114 | PREDICTED: probable isoleucine--tRNA ligase, cytoplasmic [Sesamum indicum] | |||||
JMFS052C12 | Sequence | 634 | 001896 (8) | ref|XP_011080456.1| | 4e-132 | PREDICTED: probable isoleucine--tRNA ligase, cytoplasmic [Sesamum indicum] | |||||
JMFS146D02 | Sequence | 627 | 001896 (8) | ref|XP_011080456.1| | 3e-133 | PREDICTED: probable isoleucine--tRNA ligase, cytoplasmic [Sesamum indicum] | |||||
JMSF031G18 | Sequence | 634 | 001896 (8) | ref|XP_011080456.1| | 3e-115 | PREDICTED: probable isoleucine--tRNA ligase, cytoplasmic [Sesamum indicum] | 579 | 010012 (2) | ref|XP_006443086.1| | 1e-29 | hypothetical protein CICLE_v10018576mg [Citrus clementina] gb|ESR56326.1| hypoth |
JMSF038H21 | Sequence | 697 | 001896 (8) | ref|XP_011080456.1| | 3e-137 | PREDICTED: probable isoleucine--tRNA ligase, cytoplasmic [Sesamum indicum] | |||||
JMSF041H15 | Sequence | 835 | 001896 (8) | ref|XP_011080456.1| | 2e-138 | PREDICTED: probable isoleucine--tRNA ligase, cytoplasmic [Sesamum indicum] |
This contig is upended
. : . : . : . : . : . :
JMSF041H15+ CCACATA
____________________________________________________________
consensus CCACATA
. : . : . : . : . : . :
JMSF041H15+ GATTTTCCCATCAAACTTGTTGCGAACCTTTAGATACACAAAATTAGCATTCACACAAAG
____________________________________________________________
consensus GATTTTCCCATCAAACTTGTTGCGAACCTTTAGATACACAAAATTAGCATTCACACAAAG
. : . : . : . : . : . :
JMSF041H15+ AGCAAGATTACTAGGAAGAGTCCATGGAGTCGTCGTCCAAGCAACAAAAGATGCACCGTC
____________________________________________________________
consensus AGCAAGATTACTAGGAAGAGTCCATGGAGTCGTCGTCCAAGCAACAAAAGATGCACCGTC
. : . : . : . : . : . :
JMFS052C12+ CTTGTAATT
JMFS146D02+ CTTGTAATT
JMSF038H21+ ATGGGGAAAGATACCATGATTTCAGGATCAGGAACTTCCTTGTAATT
JMSF041H15+ TTGATCATCAACTATGGGGAAAGATACCATGATTTCAGGATCAGGAA----CTTGTAATT
____________________________________________________________
consensus TTGATCATCAACTATGGGGAAAGATACCATGATTTCAGGATCAGGAACTTCCTTGTAATT
. : . : . : . : . : . :
JMFS052C12+ TGAATTGNCTTCAAAATTGGATAATGGAGTTTTGCAACCCGTGCTATATGGCATAACCTT
JMSF031G18+ TTGGATAATGGAGTTTTGCAACCCGTGCTATATGGCATAACCTT
JMFS146D02+ TGAATNTGCTTCAAAATTGGATAATGGAGTTTTGCAACCCGTGCTATATGGCATAACCTT
JMFS008D01+ CTT
JMSF038H21+ TGAATTTGCTTCAAAATTGGATAATGGAGTTTTGCAACCCGTGCTATATGGCATAACCTT
JMSF041H15+ TGAATTTGCTTCAAAATTGGATAATGGAGTTTTGCAACCCGTGCTATATGGCATAACCTT
JMFS021A08+ ATATGGCATAACCTT
____________________________________________________________
consensus TGAATTTGCTTCAAAATTGGATAATGGAGTTTTGCAACCCGTGCTATATGGCATAACCTT
. : . : . : . : . : . :
JMFS052C12+ GAAGCCTCTATACACAAGTCCCTTGTCAAACAACTGAGCAAAGACCCACCAGACGCTCTC
JMSF031G18+ GAAGCCTCTATACACAAGTCCCTNGTCAAACAACTGAGCAAAGACCCACCAGACGCTCTC
JMFS146D02+ GAAGCCTCTATACACAAGTCCCTTGTCAAACAACTGAGCAAAGACCCACCAGACGCTCTC
JMFS008D01+ GAAGCCTCTATACACAAGTCCCTTGTCAAACAACTGAGCAAAGACCCACCAGACGCTCTC
JMFS018G01+ AAGTCCCTTGTCAAACAACTGAGCAAAGACCCACCAGACGCTCTC
JMSF038H21+ GAAGCCTCTATACACAAGTCCCTTGTCAAACAACTGAGCAAAGACCCACCAGACGCTCTC
JMSF041H15+ GAAGCCTCTATACACAAGTCCCTTGTCAAACAACTGAGCAAAGACCCACCAGACGCTCTC
JMFS021A08+ GAAGCCTCTATACACAAGTCCCTTGTCAAACAACTGAGCAAAGACCCACCAGACGCTCTC
____________________________________________________________
consensus GAAGCCTCTATACACAAGTCCCTTGTCAAACAACTGAGCAAAGACCCACCAGACGCTCTC
. : . : . : . : . : . :
JMFS052C12+ CATGAACTTCAAATCCATAGTCTTGTAATCGTCTCTGAAATCAATCCAGCGCCCCATCCT
JMSF031G18+ CATGAACTTCAAATCCATAGTCTNGTAATCGTCTCTGAAATCAATCCAGCGCCCCATCCT
JMFS146D02+ CATGAACTTCAAATCCATAGTCTTGTAATCGTCTCTGAAATCAATCCAGCGCCCCATCCT
JMFS008D01+ CATGAACTTCAAATCCATAGTCTTGTAATCGTCTCTGAAATCAATCCAGCGCCCCATCCT
JMFS018G01+ CATGAACTTCAAATCCATAGTCTTGTAATCGTCTCTGAAATCAATCCAGCGCCCCATCCT
JMSF038H21+ CATGAACTTCAAATCCATAGTCTTGTAATCGTCTCTGAAATCAATCCAGCGCCCCATCCT
JMSF041H15+ CATGAACTTCAAATCCATAGTCTTGTAATCGTCTCTGAAATCAATCCAGCGCCCCATCCT
JMFS021A08+ CATGAACTTCAAATCCATAGTCTTGTAATCGTCTCTGAAATCAATCCAGCGCCCCATCCT
____________________________________________________________
consensus CATGAACTTCAAATCCATAGTCTTGTAATCGTCTCTGAAATCAATCCAGCGCCCCATCCT
. : . : . : . : . : . :
JMFS052C12+ GACCACAGTCTTCTCCCACTCCGCAACGTACCGGGTCACAATCCCCCGGCACTCCTCGTT
JMSF031G18+ GACCACAGTCTTCTCCCACTCCGCAACGTACCGGGTCACAATCCCCCGGCACTCCTCGTT
JMFS146D02+ GACCACAGTCTTCTCCCACTCCGCAACGTACCGGGTCACAATCCCCCGGCACTCCTCGTT
JMFS008D01+ GACCACAGTCTTCTCCCACTCCGCAACGTACCGGGTCACAATCCCCCGGCACTCCTCGTT
JMFS018G01+ GACCACAGTCTTCTCCCACTCCGCAACGTACCGGGTCACAATCCCCCGGCACTCCTCGTT
JMSF038H21+ GACCACAGTCTTCTCCCACTCCGCAACGTACCGGGTCACAATCCCCCGGCACTCCTCGTT
JMSF041H15+ GACCACAGTCTTCTCCCACTCCGCAACGTACCGGGTCACAATCCCCCGGCACTCCTCGTT
JMFS021A08+ GACCACAGTCTTCTCCCACTCCGCAACGTACCGGGTCACAATCCCCCGGCACTCCTCGTT
____________________________________________________________
consensus GACCACAGTCTTCTCCCACTCCGCAACGTACCGGGTCACAATCCCCCGGCACTCCTCGTT
. : . : . : . : . : . :
JMFS052C12+ GTACTTGTCAATGCCCATCTTAATCACATCCTCGCGGCTCTTAATCCCAAGCTTCTTATC
JMSF031G18+ GTACTTGTCAATGCCCATCTTAATCACATCCTCGCGGCTCTTAATCCCAAGCTTCTTATC
JMFS146D02+ GTACTTGTCAATGCCCATCTTAATCACATCCTCGCGGCTCTTAATCCCAAGCTTCTTATC
JMFS008D01+ GTACTTGTCAATGCCCATCTTAATCACATCCTCGCGGCTCTTAATCCCAAGCTTCTTATC
JMFS018G01+ GTACTTGTCAATGCCCATCTTAATCACATCCTCGCGGCTCTTAATCCCAAGCTTCTTATC
JMSF038H21+ GTACTTGTCAATGCCCATCTTAATCACATCCTCGCGGCTCTTAATCCCAAGCTTCTTATC
JMSF041H15+ GTACTTGTCAATGCCCATCTTAATCACATCCTCGCGGCTCTTAATCCCAAGCTTCTTATC
JMFS021A08+ GTACTTGTCAATGCCCATCTTAATCACATCCTCGCGGCTCTTAATCCCAAGCTTCTTATC
____________________________________________________________
consensus GTACTTGTCAATGCCCATCTTAATCACATCCTCGCGGCTCTTAATCCCAAGCTTCTTATC
. : . : . : . : . : . :
JMFS052C12+ GATCTCGTGCTCGACAGGAAGGCCGTGGCAGTCCCATCCGAACCGTCGAGTGACGTGGTG
JMSF031G18+ GATCTCGTGCTNGACAGGAAGGCCGTGGCAGTCCCATCCGAACCGTCGAGTGACGTGGTG
JMFS146D02+ GATCTCGTGCTCGACAGGAAGGCCGTGGCAGTCCCATCCGAACCGTCGAGTGACGTGGTG
JMFS008D01+ GATCTCGTGCTCGACAGGAAGGCCGTGGCAGTCCCATCCGAACCGTCGAGTGACGTGGTG
JMFS018G01+ GATCTCGTGCTCGACAGGAAGGCCGTGGCAGTCCCATCCGAACCGTCGAGTGACGTGGTG
JMSF038H21+ GATCTCGTGCTCGACAGGAAGGCCGTGGCAGTCCCATCCGAACCGTCGAGTGACGTGGTG
JMSF041H15+ GATCTCGTGCTCGACAGGAAGGCCGTGGCAGTCCCATCCGAACCGTCGAGTGACGTGGTG
JMFS021A08+ GATCTCGTGCTCGACAGGAAGGCCGTGGCAGTCCCATCCGAACCGTCGAGTGACGTGGTG
____________________________________________________________
consensus GATCTCGTGCTCGACAGGAAGGCCGTGGCAGTCCCATCCGAACCGTCGAGTGACGTGGTG
. : . : . : . : . : . :
JMFS052C12+ GCCGGCCATGGACTGGTACCGAGTGACGATATCCTTGATCGTCCCGGCGAGGATATGGCC
JMSF031G18+ GCCGGCCATGGACTGGTACCGAGTGACGATATCCTTGATCGTCCCGGCGAGGATATGGCC
JMFS146D02+ GCCGGCCATGGACTGGTACCGAGTGACGATATCCTTGATCGTCCCGGCGAGGATATGGCC
JMFS008D01+ GCCGGCCATGGACTGGTACCGAGTGACGATATCCTTGATCGTCCCGGCGAGGATATGGCC
JMFS018G01+ GCCGGCCATGGACTGGTACCGAGTGACGATATCCTTGATCGTCCCGGCGAGGATATGGCC
JMSF038H21+ GCCGGCCATGGACTGGTACCGAGTGACGATATCCTTGATCGTCCCGGCGAGGATATGGCC
JMSF041H15+ GCCGGCCATGGACTGGTACCGAGTGACGATATCCTTGATCGTCCCGGCGAGGATATGGCC
JMFS021A08+ GCCGGCCATGGACTGGTACCGAGTGACGATATCCTTGATCGTCCCGGCGAGGATATGGCC
____________________________________________________________
consensus GCCGGCCATGGACTGGTACCGAGTGACGATATCCTTGATCGTCCCGGCGAGGATATGGCC
. : . : . : . : . : . :
JMFS052C12+ GTAGTGCGGCAGACCTGTAGCGAAAGGCGGGCCGTCATAGAAGATATACTCCGGCATATC
JMSF031G18+ GTAGTGCGGCAGACCTGTAGNGAAAGGCGGGCCGTCATAGAAGATATANTCCGGCATATC
JMFS146D02+ GTAGTGCGGCAGACCTGTAGCGAAAGGCGGGCCGTCATAGAAGATATACTCCGGCATATC
JMFS008D01+ GTAGTGCGGCAGACCTGTAGCGAAAGGCGGGCCGTCATAGAAGATATACTCCGGCATATC
JMFS018G01+ GTAGTGCGGCAGACCTGTAGCGAAAGGCGGGCCGTCATAGAAGATATACTCCGGCATATC
JMSF038H21+ GTAGTGCGGCAGACCTGTAGCGAAAGGCGGGCCGTCATAGAAGATATACTCCGGCATATC
JMSF041H15+ GTAGTGCGGCAGACCTGTAGCGAAAGGCGGGCCGTCATAGAAGATATACTCCGGCATATC
JMFS021A08+ GTAGTGCGGCAGACCTGTAGCGAAAGGCGGGCCGTCATAGAAGATATACTCCGGCATATC
____________________________________________________________
consensus GTAGTGCGGCAGACCTGTAGCGAAAGGCGGGCCGTCATAGAAGATATACTCCGGCATATC
. : . : . : . : . : . :
JMFS052C12+ TTTCGTCCGGTCTAGCTGAGTCTTGAAGGCCTTGACTTCATCCCACCATTGAAGGATTCT
JMSF031G18+ TTTCGTCCGGTCTAGNTGAGTCTTGAAGGCCTTGACTTCATCCCACCATTGAAGGATTCT
JMFS146D02+ TTTCGTCCGGTCTAGCTGAGTCTTGAAGGCCTTGACTTCATCCCACCATTGAAGGATTCT
JMFS008D01+ TTTCGTCCGGTCTAGCTGAGTCTTGAAGGCCTTGACTTCATCCCACCATTGAAGGATTCT
JMFS018G01+ TTTCGTCCGGTCTAGCTGAGTCTTGAAGGCCTTGACTTCATCCCACCATTGAAGGATTCT
JMSF038H21+ TTTCGTCCGGTCTAGCTGAGTCTTGAAGGCCTTGACTTCATCCCACCATTGAAGGATTCT
JMSF041H15+ TTTCGTCCGGTCTAGCTGAGTCTTGAAGGCCTTGACTTCATCCCACCATTGAAGGATTCT
JMFS021A08+ TTTCGTCCGGTCTAGCTGAGTCTTGAAGGCCTTGACTTCATCCCACCATTGAAGGATTCT
____________________________________________________________
consensus TTTCGTCCGGTCTAGCTGAGTCTTGAAGGCCTTGACTTCATCCCACCATTGAAGGATTCT
. : . : . : . : . : . :
JMFS052C12+ CTCCTCCTGCTTGGGGAAGGAGAAATCTTTGCCCTCGCATACATCATCCATAGCAAGCTG
JMSF031G18+ CTCCTCNTGCTTGGGGAAGGAGAAATCTTTGCCCTCGCATACATCATCCATAGCAAGCTG
JMFS146D02+ CTCCTCCTGCTTGGGGAAGGAGAAATCTTTGCCCTCGCATACATCATC
JMFS008D01+ CTCCTCCTGCTTGGGGAAGGAGAAATCTTTGCCCTCGCATACATCATCCATAGCAAGCTG
JMFS018G01+ CTCCTCCTGCTTGGGGAAGGAGAAATCTTTGCCCTCGC
JMSF038H21+ CTCCTCCTGCTTGGGGAAGGAGAAATCTTTGCCCTCGCATACATCATCCATAGCAAGCTG
JMSF041H15+ CTCCTCCTGCTTGGGGAAGGAGAAATCTTTGCCCTCGCATACATCATCCATAGCAAGCTG
JMFS021A08+ CTCCTCCTGCTTGGGGAAGGAGAAATCTTTGCCCTCGCATACATCATCCATAGCAAGCTG
____________________________________________________________
consensus CTCCTCCTGCTTGGGGAAGGAGAAATCTTTGCCCTCGCATACATCATCCATAGCAAGCTG
. : . : . : . : . : . :
JMFS052C12+ TTCTGTA
JMSF031G18+ TTCTGTAGTGGTGGTGTACGCGGGCAATGTAAGCTGTAAGAACTTCACT
JMFS008D01+ TTCTGTAGTGGTGGTGTACGCGGGCAATGTAAGCTGTAAGAA
JMSF038H21+ TTCTGTAGTGGTGGTGTACGCGGGCAATGTAAGCTGTAAGAACTTCACT
JMSF041H15+ TTCTGTAGTGGTGGTGTACGCGGGCAATGTAAGCTGTAAGAACTTCACT
JMFS021A08+ TTCTGTAGTGGTGGTGTACGCGGGCAATGTAAGCTGTAAGAACTTCACTGTGTTGTAGAA
____________________________________________________________
consensus TTCTGTAGTGGTGGTGTACGCGGGCAATGTAAGCTGTAAGAACTTCACTGTGTTGTAGAA