Contig 001896:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS008D01Sequence611001896 (8)emb|CDP12689.1|7e-115unnamed protein product [Coffea canephora]
JMFS018G01Sequence503001896 (8)emb|CDP12689.1|7e-104unnamed protein product [Coffea canephora]
JMFS021A08Sequence615001896 (8)ref|XP_011080456.1|5e-114PREDICTED: probable isoleucine--tRNA ligase, cytoplasmic [Sesamum indicum]
JMFS052C12Sequence634001896 (8)ref|XP_011080456.1|4e-132PREDICTED: probable isoleucine--tRNA ligase, cytoplasmic [Sesamum indicum]
JMFS146D02Sequence627001896 (8)ref|XP_011080456.1|3e-133PREDICTED: probable isoleucine--tRNA ligase, cytoplasmic [Sesamum indicum]
JMSF031G18Sequence634001896 (8)ref|XP_011080456.1|3e-115PREDICTED: probable isoleucine--tRNA ligase, cytoplasmic [Sesamum indicum]579010012 (2)ref|XP_006443086.1|1e-29hypothetical protein CICLE_v10018576mg [Citrus clementina] gb|ESR56326.1| hypoth
JMSF038H21Sequence697001896 (8)ref|XP_011080456.1|3e-137PREDICTED: probable isoleucine--tRNA ligase, cytoplasmic [Sesamum indicum]
JMSF041H15Sequence835001896 (8)ref|XP_011080456.1|2e-138PREDICTED: probable isoleucine--tRNA ligase, cytoplasmic [Sesamum indicum]

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF041H15+ CCACATA
                      ____________________________________________________________
consensus CCACATA
 
. : . : . : . : . : . :
JMSF041H15+ GATTTTCCCATCAAACTTGTTGCGAACCTTTAGATACACAAAATTAGCATTCACACAAAG
                      ____________________________________________________________
consensus GATTTTCCCATCAAACTTGTTGCGAACCTTTAGATACACAAAATTAGCATTCACACAAAG
 
. : . : . : . : . : . :
JMSF041H15+ AGCAAGATTACTAGGAAGAGTCCATGGAGTCGTCGTCCAAGCAACAAAAGATGCACCGTC
                      ____________________________________________________________
consensus AGCAAGATTACTAGGAAGAGTCCATGGAGTCGTCGTCCAAGCAACAAAAGATGCACCGTC
 
. : . : . : . : . : . :
JMFS052C12+ CTTGTAATT
JMFS146D02+ CTTGTAATT
JMSF038H21+ ATGGGGAAAGATACCATGATTTCAGGATCAGGAACTTCCTTGTAATT
JMSF041H15+ TTGATCATCAACTATGGGGAAAGATACCATGATTTCAGGATCAGGAA----CTTGTAATT
                      ____________________________________________________________
consensus TTGATCATCAACTATGGGGAAAGATACCATGATTTCAGGATCAGGAACTTCCTTGTAATT
 
. : . : . : . : . : . :
JMFS052C12+ TGAATTGNCTTCAAAATTGGATAATGGAGTTTTGCAACCCGTGCTATATGGCATAACCTT
JMSF031G18+ TTGGATAATGGAGTTTTGCAACCCGTGCTATATGGCATAACCTT
JMFS146D02+ TGAATNTGCTTCAAAATTGGATAATGGAGTTTTGCAACCCGTGCTATATGGCATAACCTT
JMFS008D01+ CTT
JMSF038H21+ TGAATTTGCTTCAAAATTGGATAATGGAGTTTTGCAACCCGTGCTATATGGCATAACCTT
JMSF041H15+ TGAATTTGCTTCAAAATTGGATAATGGAGTTTTGCAACCCGTGCTATATGGCATAACCTT
JMFS021A08+ ATATGGCATAACCTT
                      ____________________________________________________________
consensus TGAATTTGCTTCAAAATTGGATAATGGAGTTTTGCAACCCGTGCTATATGGCATAACCTT
 
. : . : . : . : . : . :
JMFS052C12+ GAAGCCTCTATACACAAGTCCCTTGTCAAACAACTGAGCAAAGACCCACCAGACGCTCTC
JMSF031G18+ GAAGCCTCTATACACAAGTCCCTNGTCAAACAACTGAGCAAAGACCCACCAGACGCTCTC
JMFS146D02+ GAAGCCTCTATACACAAGTCCCTTGTCAAACAACTGAGCAAAGACCCACCAGACGCTCTC
JMFS008D01+ GAAGCCTCTATACACAAGTCCCTTGTCAAACAACTGAGCAAAGACCCACCAGACGCTCTC
JMFS018G01+ AAGTCCCTTGTCAAACAACTGAGCAAAGACCCACCAGACGCTCTC
JMSF038H21+ GAAGCCTCTATACACAAGTCCCTTGTCAAACAACTGAGCAAAGACCCACCAGACGCTCTC
JMSF041H15+ GAAGCCTCTATACACAAGTCCCTTGTCAAACAACTGAGCAAAGACCCACCAGACGCTCTC
JMFS021A08+ GAAGCCTCTATACACAAGTCCCTTGTCAAACAACTGAGCAAAGACCCACCAGACGCTCTC
                      ____________________________________________________________
consensus GAAGCCTCTATACACAAGTCCCTTGTCAAACAACTGAGCAAAGACCCACCAGACGCTCTC
 
. : . : . : . : . : . :
JMFS052C12+ CATGAACTTCAAATCCATAGTCTTGTAATCGTCTCTGAAATCAATCCAGCGCCCCATCCT
JMSF031G18+ CATGAACTTCAAATCCATAGTCTNGTAATCGTCTCTGAAATCAATCCAGCGCCCCATCCT
JMFS146D02+ CATGAACTTCAAATCCATAGTCTTGTAATCGTCTCTGAAATCAATCCAGCGCCCCATCCT
JMFS008D01+ CATGAACTTCAAATCCATAGTCTTGTAATCGTCTCTGAAATCAATCCAGCGCCCCATCCT
JMFS018G01+ CATGAACTTCAAATCCATAGTCTTGTAATCGTCTCTGAAATCAATCCAGCGCCCCATCCT
JMSF038H21+ CATGAACTTCAAATCCATAGTCTTGTAATCGTCTCTGAAATCAATCCAGCGCCCCATCCT
JMSF041H15+ CATGAACTTCAAATCCATAGTCTTGTAATCGTCTCTGAAATCAATCCAGCGCCCCATCCT
JMFS021A08+ CATGAACTTCAAATCCATAGTCTTGTAATCGTCTCTGAAATCAATCCAGCGCCCCATCCT
                      ____________________________________________________________
consensus CATGAACTTCAAATCCATAGTCTTGTAATCGTCTCTGAAATCAATCCAGCGCCCCATCCT
 
. : . : . : . : . : . :
JMFS052C12+ GACCACAGTCTTCTCCCACTCCGCAACGTACCGGGTCACAATCCCCCGGCACTCCTCGTT
JMSF031G18+ GACCACAGTCTTCTCCCACTCCGCAACGTACCGGGTCACAATCCCCCGGCACTCCTCGTT
JMFS146D02+ GACCACAGTCTTCTCCCACTCCGCAACGTACCGGGTCACAATCCCCCGGCACTCCTCGTT
JMFS008D01+ GACCACAGTCTTCTCCCACTCCGCAACGTACCGGGTCACAATCCCCCGGCACTCCTCGTT
JMFS018G01+ GACCACAGTCTTCTCCCACTCCGCAACGTACCGGGTCACAATCCCCCGGCACTCCTCGTT
JMSF038H21+ GACCACAGTCTTCTCCCACTCCGCAACGTACCGGGTCACAATCCCCCGGCACTCCTCGTT
JMSF041H15+ GACCACAGTCTTCTCCCACTCCGCAACGTACCGGGTCACAATCCCCCGGCACTCCTCGTT
JMFS021A08+ GACCACAGTCTTCTCCCACTCCGCAACGTACCGGGTCACAATCCCCCGGCACTCCTCGTT
                      ____________________________________________________________
consensus GACCACAGTCTTCTCCCACTCCGCAACGTACCGGGTCACAATCCCCCGGCACTCCTCGTT
 
. : . : . : . : . : . :
JMFS052C12+ GTACTTGTCAATGCCCATCTTAATCACATCCTCGCGGCTCTTAATCCCAAGCTTCTTATC
JMSF031G18+ GTACTTGTCAATGCCCATCTTAATCACATCCTCGCGGCTCTTAATCCCAAGCTTCTTATC
JMFS146D02+ GTACTTGTCAATGCCCATCTTAATCACATCCTCGCGGCTCTTAATCCCAAGCTTCTTATC
JMFS008D01+ GTACTTGTCAATGCCCATCTTAATCACATCCTCGCGGCTCTTAATCCCAAGCTTCTTATC
JMFS018G01+ GTACTTGTCAATGCCCATCTTAATCACATCCTCGCGGCTCTTAATCCCAAGCTTCTTATC
JMSF038H21+ GTACTTGTCAATGCCCATCTTAATCACATCCTCGCGGCTCTTAATCCCAAGCTTCTTATC
JMSF041H15+ GTACTTGTCAATGCCCATCTTAATCACATCCTCGCGGCTCTTAATCCCAAGCTTCTTATC
JMFS021A08+ GTACTTGTCAATGCCCATCTTAATCACATCCTCGCGGCTCTTAATCCCAAGCTTCTTATC
                      ____________________________________________________________
consensus GTACTTGTCAATGCCCATCTTAATCACATCCTCGCGGCTCTTAATCCCAAGCTTCTTATC
 
. : . : . : . : . : . :
JMFS052C12+ GATCTCGTGCTCGACAGGAAGGCCGTGGCAGTCCCATCCGAACCGTCGAGTGACGTGGTG
JMSF031G18+ GATCTCGTGCTNGACAGGAAGGCCGTGGCAGTCCCATCCGAACCGTCGAGTGACGTGGTG
JMFS146D02+ GATCTCGTGCTCGACAGGAAGGCCGTGGCAGTCCCATCCGAACCGTCGAGTGACGTGGTG
JMFS008D01+ GATCTCGTGCTCGACAGGAAGGCCGTGGCAGTCCCATCCGAACCGTCGAGTGACGTGGTG
JMFS018G01+ GATCTCGTGCTCGACAGGAAGGCCGTGGCAGTCCCATCCGAACCGTCGAGTGACGTGGTG
JMSF038H21+ GATCTCGTGCTCGACAGGAAGGCCGTGGCAGTCCCATCCGAACCGTCGAGTGACGTGGTG
JMSF041H15+ GATCTCGTGCTCGACAGGAAGGCCGTGGCAGTCCCATCCGAACCGTCGAGTGACGTGGTG
JMFS021A08+ GATCTCGTGCTCGACAGGAAGGCCGTGGCAGTCCCATCCGAACCGTCGAGTGACGTGGTG
                      ____________________________________________________________
consensus GATCTCGTGCTCGACAGGAAGGCCGTGGCAGTCCCATCCGAACCGTCGAGTGACGTGGTG
 
. : . : . : . : . : . :
JMFS052C12+ GCCGGCCATGGACTGGTACCGAGTGACGATATCCTTGATCGTCCCGGCGAGGATATGGCC
JMSF031G18+ GCCGGCCATGGACTGGTACCGAGTGACGATATCCTTGATCGTCCCGGCGAGGATATGGCC
JMFS146D02+ GCCGGCCATGGACTGGTACCGAGTGACGATATCCTTGATCGTCCCGGCGAGGATATGGCC
JMFS008D01+ GCCGGCCATGGACTGGTACCGAGTGACGATATCCTTGATCGTCCCGGCGAGGATATGGCC
JMFS018G01+ GCCGGCCATGGACTGGTACCGAGTGACGATATCCTTGATCGTCCCGGCGAGGATATGGCC
JMSF038H21+ GCCGGCCATGGACTGGTACCGAGTGACGATATCCTTGATCGTCCCGGCGAGGATATGGCC
JMSF041H15+ GCCGGCCATGGACTGGTACCGAGTGACGATATCCTTGATCGTCCCGGCGAGGATATGGCC
JMFS021A08+ GCCGGCCATGGACTGGTACCGAGTGACGATATCCTTGATCGTCCCGGCGAGGATATGGCC
                      ____________________________________________________________
consensus GCCGGCCATGGACTGGTACCGAGTGACGATATCCTTGATCGTCCCGGCGAGGATATGGCC
 
. : . : . : . : . : . :
JMFS052C12+ GTAGTGCGGCAGACCTGTAGCGAAAGGCGGGCCGTCATAGAAGATATACTCCGGCATATC
JMSF031G18+ GTAGTGCGGCAGACCTGTAGNGAAAGGCGGGCCGTCATAGAAGATATANTCCGGCATATC
JMFS146D02+ GTAGTGCGGCAGACCTGTAGCGAAAGGCGGGCCGTCATAGAAGATATACTCCGGCATATC
JMFS008D01+ GTAGTGCGGCAGACCTGTAGCGAAAGGCGGGCCGTCATAGAAGATATACTCCGGCATATC
JMFS018G01+ GTAGTGCGGCAGACCTGTAGCGAAAGGCGGGCCGTCATAGAAGATATACTCCGGCATATC
JMSF038H21+ GTAGTGCGGCAGACCTGTAGCGAAAGGCGGGCCGTCATAGAAGATATACTCCGGCATATC
JMSF041H15+ GTAGTGCGGCAGACCTGTAGCGAAAGGCGGGCCGTCATAGAAGATATACTCCGGCATATC
JMFS021A08+ GTAGTGCGGCAGACCTGTAGCGAAAGGCGGGCCGTCATAGAAGATATACTCCGGCATATC
                      ____________________________________________________________
consensus GTAGTGCGGCAGACCTGTAGCGAAAGGCGGGCCGTCATAGAAGATATACTCCGGCATATC
 
. : . : . : . : . : . :
JMFS052C12+ TTTCGTCCGGTCTAGCTGAGTCTTGAAGGCCTTGACTTCATCCCACCATTGAAGGATTCT
JMSF031G18+ TTTCGTCCGGTCTAGNTGAGTCTTGAAGGCCTTGACTTCATCCCACCATTGAAGGATTCT
JMFS146D02+ TTTCGTCCGGTCTAGCTGAGTCTTGAAGGCCTTGACTTCATCCCACCATTGAAGGATTCT
JMFS008D01+ TTTCGTCCGGTCTAGCTGAGTCTTGAAGGCCTTGACTTCATCCCACCATTGAAGGATTCT
JMFS018G01+ TTTCGTCCGGTCTAGCTGAGTCTTGAAGGCCTTGACTTCATCCCACCATTGAAGGATTCT
JMSF038H21+ TTTCGTCCGGTCTAGCTGAGTCTTGAAGGCCTTGACTTCATCCCACCATTGAAGGATTCT
JMSF041H15+ TTTCGTCCGGTCTAGCTGAGTCTTGAAGGCCTTGACTTCATCCCACCATTGAAGGATTCT
JMFS021A08+ TTTCGTCCGGTCTAGCTGAGTCTTGAAGGCCTTGACTTCATCCCACCATTGAAGGATTCT
                      ____________________________________________________________
consensus TTTCGTCCGGTCTAGCTGAGTCTTGAAGGCCTTGACTTCATCCCACCATTGAAGGATTCT
 
. : . : . : . : . : . :
JMFS052C12+ CTCCTCCTGCTTGGGGAAGGAGAAATCTTTGCCCTCGCATACATCATCCATAGCAAGCTG
JMSF031G18+ CTCCTCNTGCTTGGGGAAGGAGAAATCTTTGCCCTCGCATACATCATCCATAGCAAGCTG
JMFS146D02+ CTCCTCCTGCTTGGGGAAGGAGAAATCTTTGCCCTCGCATACATCATC
JMFS008D01+ CTCCTCCTGCTTGGGGAAGGAGAAATCTTTGCCCTCGCATACATCATCCATAGCAAGCTG
JMFS018G01+ CTCCTCCTGCTTGGGGAAGGAGAAATCTTTGCCCTCGC
JMSF038H21+ CTCCTCCTGCTTGGGGAAGGAGAAATCTTTGCCCTCGCATACATCATCCATAGCAAGCTG
JMSF041H15+ CTCCTCCTGCTTGGGGAAGGAGAAATCTTTGCCCTCGCATACATCATCCATAGCAAGCTG
JMFS021A08+ CTCCTCCTGCTTGGGGAAGGAGAAATCTTTGCCCTCGCATACATCATCCATAGCAAGCTG
                      ____________________________________________________________
consensus CTCCTCCTGCTTGGGGAAGGAGAAATCTTTGCCCTCGCATACATCATCCATAGCAAGCTG
 
. : . : . : . : . : . :
JMFS052C12+ TTCTGTA
JMSF031G18+ TTCTGTAGTGGTGGTGTACGCGGGCAATGTAAGCTGTAAGAACTTCACT
JMFS008D01+ TTCTGTAGTGGTGGTGTACGCGGGCAATGTAAGCTGTAAGAA
JMSF038H21+ TTCTGTAGTGGTGGTGTACGCGGGCAATGTAAGCTGTAAGAACTTCACT
JMSF041H15+ TTCTGTAGTGGTGGTGTACGCGGGCAATGTAAGCTGTAAGAACTTCACT
JMFS021A08+ TTCTGTAGTGGTGGTGTACGCGGGCAATGTAAGCTGTAAGAACTTCACTGTGTTGTAGAA
                      ____________________________________________________________
consensus TTCTGTAGTGGTGGTGTACGCGGGCAATGTAAGCTGTAAGAACTTCACTGTGTTGTAGAA