Contig 001893:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS016E08Sequence605001893 (2)ref|XP_010540708.1|1e-75PREDICTED: AP-4 complex subunit epsilon [Tarenaya hassleriana]
JMFS144F09Sequence600001893 (2)gb|KDP28329.1|7e-108hypothetical protein JCGZ_14100 [Jatropha curcas]

Alignment

This contig is upended


. : . : . : . : . : . :
JMFS144F09+ CATTACAGCTTTTTTCC
                      ____________________________________________________________
consensus CATTACAGCTTTTTTCC
 
. : . : . : . : . : . :
JMFS144F09+ TAACAGCCTCCTTGGCGTGTCCCAGCAGCTCCACCACTTGAGGCAACACAGCGGGGATTG
                      ____________________________________________________________
consensus TAACAGCCTCCTTGGCGTGTCCCAGCAGCTCCACCACTTGAGGCAACACAGCGGGGATTG
 
. : . : . : . : . : . :
JMFS144F09+ TGTCCTCATTAATCAACTTACAAACAGCATTCAATGCCGAGCAAACGACCAAGTAATTAT
JMFS016E08+ ATTAT
                      ____________________________________________________________
consensus TGTCCTCATTAATCAACTTACAAACAGCATTCAATGCCGAGCAAACGACCAAGTAATTAT
 
. : . : . : . : . : . :
JMFS144F09+ CCGACTTCAAGTCCTTCTGGATCGTGTTTACAATCAAGATAATCAAATCATGGTCCTCGT
JMFS016E08+ CCGACTTCAAGTCCTTCTGGATCGTGTTTACAATCAAGATAATCAAATCATGGTCCTCGT
                      ____________________________________________________________
consensus CCGACTTCAAGTCCTTCTGGATCGTGTTTACAATCAAGATAATCAAATCATGGTCCTCGT
 
. : . : . : . : . : . :
JMFS144F09+ TCAGAAACAAGGTCACGGCAAGGTACCCGGTTCTCTTGTGCAGCAAAGTATCATCGTGCG
JMFS016E08+ TCAGAAACAAGGTCACGGCAAGGTACCCGGTTCTCTTGTGCAGCAAAGTATCATCGTGCG
                      ____________________________________________________________
consensus TCAGAAACAAGGTCACGGCAAGGTACCCGGTTCTCTTGTGCAGCAAAGTATCATCGTGCG
 
. : . : . : . : . : . :
JMFS144F09+ TCATCTTAACGGCGTGAATGTAGCCGAACGAAGCGTCGTGGCCAAGCATCTCCACATACA
JMFS016E08+ TCATCTTAACGGCGTGAATGTAGCCGAACGAAGCGTCGTGGCCAAGCATCTCCACATACA
                      ____________________________________________________________
consensus TCATCTTAACGGCGTGAATGTAGCCGAACGAAGCGTCGTGGCCAAGCATCTCCACATACA
 
. : . : . : . : . : . :
JMFS144F09+ CAAGCCGCATTATGAATTCCTTCATCTTCCGCTTCGGGATATCAGGCTCTACGATGCGGC
JMFS016E08+ CAAGCCGCATTATGAATTCCTTCATCTTCCGCTTCGGGATATCAGGCTCTACGATGCGGC
                      ____________________________________________________________
consensus CAAGCCGCATTATGAATTCCTTCATCTTCCGCTTCGGGATATCAGGCTCTACGATGCGGC
 
. : . : . : . : . : . :
JMFS144F09+ GCTTCAGGGTCTCGATCTCATTGCGAACAATGCGGTCTTCTTCCGCCTTGGATCTGGCTT
JMFS016E08+ GCTTCAGGGTCTCGATCTCATTGCGAACAATGCGGTCTTCTTCCGCCTTGGATCTGGCTT
                      ____________________________________________________________
consensus GCTTCAGGGTCTCGATCTCATTGCGAACAATGCGGTCTTCTTCCGCCTTGGATCTGGCTT
 
. : . : . : . : . : . :
JMFS144F09+ CGCCGATGGCCTTGATCAGGTCCAAGAACTCCTTCGACTGCCCGAACCCGCCTTGGGAGC
JMFS016E08+ CGCCGATGGCCTTGATCAGGTCCAAGAACTCGTTCGACTGCCCGAACCCGCCTTGGGAGC
                      ____________________________________________________________
consensus CGCCGATGGCCTTGATCAGGTCCAAGAACTCGTTCGACTGCCCGAACCCGCCTTGGGAGC
 
. : . : . : . : . : . :
JMFS144F09+ CCATTGCGAGCTCCAGTCCGATTGTCTTCAACTGCTCCA
JMFS016E08+ CCATTGCGAGCTCCAGTCCGATTGTCTTCAACTGCTCCAXXXXXXXXXXXXXXXXXXXXX
                      ____________________________________________________________
consensus CCATTGCGAGCTCCAGTCCGATTGTCTTCAACTGCTCCANNNNNNNNNNNNNNNNNNNNN
 
. : . : . : . : . : . :
JMFS016E08+ XXCAGAACGAACAATGCCAAGTTTTATTCGGTAGAAATCATGAGATTTTACGTTCCTCGA
                      ____________________________________________________________
consensus NNCAGAACGAACAATGCCAAGTTTTATTCGGTAGAAATCATGAGATTTTACGTTCCTCGA
 
. : . : . : . : . : . :
JMFS016E08+ TTCAGATCGAGGATTGAAACCGATAATAATTTTAGGTTTGAAGATTGGGGAATTTCTGGT
                      ____________________________________________________________
consensus TTCAGATCGAGGATTGAAACCGATAATAATTTTAGGTTTGAAGATTGGGGAATTTCTGGT
 
. : . : . : . : . : . :
JMFS016E08+ GATATCTCTATTCTCTAATGCCAACTCTGCTGTAGATCGATGCCCGGGAAAGTGACACGT
                      ____________________________________________________________
consensus GATATCTCTATTCTCTAATGCCAACTCTGCTGTAGATCGATGCCCGGGAAAGTGACACGT