Contig 001882:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS008A03Sequence631001882 (2)ref|XP_009588900.1|340PREDICTED: uncharacterized protein LOC104086356 [Nicotiana tomentosiformis]
JMSF033J09Sequence651001882 (2)ref|XP_009588900.1|337PREDICTED: uncharacterized protein LOC104086356 [Nicotiana tomentosiformis]687011284 (2)emb|CDP19908.1|1e-91unnamed protein product [Coffea canephora]

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF033J09+ CGGAC
                      ____________________________________________________________
consensus CGGAC
 
. : . : . : . : . : . :
JMSF033J09+ AGAATCAGCATGCCTGCATAAGTCATCTGCATCAATCATTATCATGTCTGCCCCTGCTTC
JMFS008A03+ CATCAATCATTATCATGTCTGCCCCTGCTTC
                      ____________________________________________________________
consensus AGAATCAGCATGCCTGCATAAGTCATCTGCATCAATCATTATCATGTCTGCCCCTGCTTC
 
. : . : . : . : . : . :
JMSF033J09+ TAAGCATCTCTCTGCCCTCCTAACCAAGAGGTCCACATCTTCCACAAAGTCTGAACTTCG
JMFS008A03+ TAAGCATCTCTCTGCCCTCCTAACCAAGAGGTCCACATCTTCCACAAAGTCTGAACTTCG
                      ____________________________________________________________
consensus TAAGCATCTCTCTGCCCTCCTAACCAAGAGGTCCACATCTTCCACAAAGTCTGAACTTCG
 
. : . : . : . : . : . :
JMSF033J09+ AGGCGCTGGAACAACATAAGCTCCAAAAGCTCTATTGCTGCTCAAGGGCACATCAGACTT
JMFS008A03+ AGGCGCTGGAACAACATAAGCTCCAAAAGCTCTATTGCTGCTCAAGGGCACATCAGACTT
                      ____________________________________________________________
consensus AGGCGCTGGAACAACATAAGCTCCAAAAGCTCTATTGCTGCTCAAGGGCACATCAGACTT
 
. : . : . : . : . : . :
JMSF033J09+ GTTAAACTTGACTGAAAACTGAGGCTTAACTCGAAGACCATCACTCTTAATCAACCGCAC
JMFS008A03+ GTTAAACTTGACTGAAAACTGAGGCTTAACTCGAAGACCATCACTCTTAATCAACCGCAC
                      ____________________________________________________________
consensus GTTAAACTTGACTGAAAACTGAGGCTTAACTCGAAGACCATCACTCTTAATCAACCGCAC
 
. : . : . : . : . : . :
JMSF033J09+ ATATCTTAAAAGAGTCTCCTCAGGAATATCTAATGATGTAACATCGAGTTCAATGGTATC
JMFS008A03+ ATATCTTAAAAGAGTCTCCTCAGGAATATCTAATGATGTAACATCGAGTTCAATGGTATC
                      ____________________________________________________________
consensus ATATCTTAAAAGAGTCTCCTCAGGAATATCTAATGATGTAACATCGAGTTCAATGGTATC
 
. : . : . : . : . : . :
JMSF033J09+ AAACCCCAACTGCTTATATTCCTCGATGTATTCTTTAAGATGTGAAGGACCTTTGCGAAG
JMFS008A03+ AAACCCCAACTGCTTATATTCCTCGATGTATTCTTTAAGATGTGAAGGACCTTTGCGAAG
                      ____________________________________________________________
consensus AAACCCCAACTGCTTATATTCCTCGATGTATTCTTTAAGATGTGAAGGACCTTTGCGAAG
 
. : . : . : . : . : . :
JMSF033J09+ CAAGTTTTCAGCACAATCACCACTGCTAACATATACATTGTGTTTATGTGCCATGTCAAT
JMFS008A03+ CAAGTTTTCAGCACAATCACCACTGCTAACATACACATTGTGTTTATGTGCCATGTCAAT
                      ____________________________________________________________
consensus CAAGTTTTCAGCACAATCACCACTGCTAACATATACATTGTGTTTATGTGCCATGTCAAT
 
. : . : . : . : . : . :
JMSF033J09+ TACGTCTCTGATGTATGTCTTTGGCATCATACTGTGAGATCCTCCACTAAACTTCAGCCC
JMFS008A03+ TACGTCTCTGATGTATGTCTTTGGCATCATACTGTGAGATCCTCCACTAAACTTCAGCCC
                      ____________________________________________________________
consensus TACGTCTCTGATGTATGTCTTTGGCATCATACTGTGAGATCCTCCACTAAACTTCAGCCC
 
. : . : . : . : . : . :
JMSF033J09+ ATCAACAAACTGCCCCATAGACTCAAAAATATCCTGGAGGAGGGGGCGGGAGAAGAGAGA
JMFS008A03+ ATCAACAAACTGCCCCATAGACTCAAAAATATCCTGGAGGAGGGGGCGGGAGAAGAGAGA
                      ____________________________________________________________
consensus ATCAACAAACTGCCCCATAGACTCAAAAATATCCTGGAGGAGGGGGCGGGAGAAGAGAGA
 
. : . : . : . : . : . :
JMSF033J09+ GTAATGCGGAGACCTCATTTCGGTGACGCCATAACTCCTTGGCTTTTCCGGCCGATCTTC
JMFS008A03+ GTAATGCGGAGACCTCATTTCGGTGACGCCATAACTCCTTGGCTTTTCCGGCCGATCTTC
                      ____________________________________________________________
consensus GTAATGCGGAGACCTCATTTCGGTGACGCCATAACTCCTTGGCTTTTCCGGCCGATCTTC
 
. : . : . : . : . : . :
JMSF033J09+ GTCGTCGTAGAAGCTTTTCCACCTGTACGCTGCCATCGCTCTCT
JMFS008A03+ GTCGTCGTAGAAGCTTTTCCACCTGTACGCTGCCATCGCTCTCTGTCTCCGTTGGTCTCA
                      ____________________________________________________________
consensus GTCGTCGTAGAAGCTTTTCCACCTGTACGCTGCCATCGCTCTCTGTCTCCGTTGGTCTCA