Contig 001844:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFN004D09Sequence644001844 (3)ref|XP_002271461.1|1e-30PREDICTED: 14 kDa proline-rich protein DC2.15 [Vitis vinifera]
JMFN032F19Sequence629001844 (3)ref|XP_002271461.1|1e-30PREDICTED: 14 kDa proline-rich protein DC2.15 [Vitis vinifera]
JMFN033C06Sequence602001844 (3)ref|XP_002271461.1|8e-31PREDICTED: 14 kDa proline-rich protein DC2.15 [Vitis vinifera]

Alignment

This contig is upended


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JMFN033C06+                                          CGCCAAATCAATGGCAGTAAGGAACATAA
JMFN004D09+                          TCATTGATAAGCCACTCGCCAAATCAATGACAGTAAGGAACATAA
JMFN032F19+                                          CGCCAAATCAATGACAGTAAGGAACATAA
                      ____________________________________________________________
consensus                            TCATTGATAAGCCACTCGCCAAATCAATGACAGTAAGGAACATAA
 
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JMFN033C06+           ACTTAATACAATAACATGTTGTAATAATATCTCCAGAAAACCTAGCCATGAGAGCTAGGA
JMFN004D09+           ACTTAATACAATAACATGTTGTAATAATATCTCCAGAAAACCTAGCCATGAGAGCTAGGA
JMFN032F19+           ACTTAATACAATAACATGTTGTAATAATATCTCCAGAAAACCTAGCCATGAGAGCTAGGA
                      ____________________________________________________________
consensus             ACTTAATACAATAACATGTTGTAATAATATCTCCAGAAAACCTAGCCATGAGAGCTAGGA
 
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JMFN033C06+           ATCTGAAAACTAACAAGACGTATATGATTTTAGAGAAAACATATAAATATAGAGGAAAAT
JMFN004D09+           ATCTGAAAACTAACAAGACGTATATGATTTTAGAGAAAACATATAAATATAGAGGAAAAT
JMFN032F19+           ATCTGAAAACTAACAAGACGTATATGATTTTAGAGAAAACATATAAATATAGAGGAAAAT
                      ____________________________________________________________
consensus             ATCTGAAAACTAACAAGACGTATATGATTTTAGAGAAAACATATAAATATAGAGGAAAAT
 
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JMFN033C06+           GGCACTCTTTGTCTCAAAGTAGACTTATTTGCACTTAATATGTATAAGATATATAAGATT
JMFN004D09+           GGCACTCTTTGTCTCAAAGTAGACTTATTTGCACTTAATATGTATAAGATATATAAGATT
JMFN032F19+           GGCACTCTTTGTCTCAAAGTAGACTTATTTGCACTTAATATGTATAAGATATATAAGATT
                      ____________________________________________________________
consensus             GGCACTCTTTGTCTCAAAGTAGACTTATTTGCACTTAATATGTATAAGATATATAAGATT
 
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JMFN033C06+           AGATATAAAAGTGGGCTTATTTGCATTGGTATCCAATAGGGACACTCTTTCCACAGACAT
JMFN004D09+           AGATATAAAAGTGGGCTTATTTGCATTGGTATCCAATAGGGACACTCTTTCCACAGACAT
JMFN032F19+           AGATATAAAAGTGGGCTTATTTGCATTGGTATCCAATAGGGACACTCTTTCCACAGACAT
                      ____________________________________________________________
consensus             AGATATAAAAGTGGGCTTATTTGCATTGGTATCCAATAGGGACACTCTTTCCACAGACAT
 
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JMFN033C06+           TGATCAACAGGTTGAGGGAGACAGGAATATTGTCAAACTTGATTCCGAAGGTGTTGGCTT
JMFN004D09+           TGATCAACAGGTTGAGGGAGACAGGAATATTGTCAAACTTGATTCCGAAGGTGTTGGCTT
JMFN032F19+           TGATCAACAGGTTGAGGGAGACAGGAATATTGTCAAACTTGATTCCGAAGGTGTTGGCTT
                      ____________________________________________________________
consensus             TGATCAACAGGTTGAGGGAGACAGGAATATTGTCAAACTTGATTCCGAAGGTGTTGGCTT
 
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JMFN033C06+           TAAGGACGGTGCAAAGGCAGGCGGCGGCTTCAAGGTCGACAAGTCCGCTAATGAGAGAGC
JMFN004D09+           TAAGGACGGTGCAAAGGCAGGCGGCGGCTTCAAGGTCGACAAGTCCGCTAATGAGAGAGC
JMFN032F19+           TAAGGACGGTGCAAAGGCAGGCGGCGGCTTCAAGGTCGACAAGTCCGCTAATGAGAGAGC
                      ____________________________________________________________
consensus             TAAGGACGGTGCAAAGGCAGGCGGCGGCTTCAAGGTCGACAAGTCCGCTAATGAGAGAGC
 
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JMFN033C06+           AGCAAGGCATGGTGGCCGGGCTTCCAGCAACAAGGTGGAGCAAGTCCTTCAACAGAACAG
JMFN004D09+           AGCAAGGCATGGTGGCCGGGCTTCCAGCAACAAGGTGGAGCAAGTCCTTCAACAGAACAG
JMFN032F19+           AGCAAGGCATGGTGGCCGGGCTTCCAGCAACAAGGTGGAGCAAGTCCTTCAACAGAACAG
                      ____________________________________________________________
consensus             AGCAAGGCATGGTGGCCGGGCTTCCAGCAACAAGGTGGAGCAAGTCCTTCAACAGAACAG
 
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JMFN033C06+           CACACACTCCCAATTCCAGTGCGCGTTTAGGGCACTCGCCCTTTAGGGGAGGCAGCAGAT
JMFN004D09+           CACACACTCCCAATTCCAGTGCGCGTTTAGGGCACTCGCCCTTTAGGGGAGGCAGCAGAT
JMFN032F19+           CACACACTCCCAATTCCAGTGCGCGTTTAGGGCACTCGCCCTTTAGGGGAGGCAGCAGAT
                      ____________________________________________________________
consensus             CACACACTCCCAATTCCAGTGCGCGTTTAGGGCACTCGCCCTTTAGGGGAGGCAGCAGAT
 
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JMFN033C06+           CATTGGTGAAGGCGGCGGAGCTAACCCCCGTGAAGAAGAGAAGGTTTAAAGTGAGGAAAA
JMFN004D09+           CATTGGTGAAGGCGGCGGAGCTAACCCCCGTGAAGAAGAGAAGGTTTAAAGTGAGGAAAA
JMFN032F19+           CATTGGTGAAGGCGGCGGAGCTAACCCCCGTGAAGAAGAGAAGGTTTAAAGTGAGGAAAA
                      ____________________________________________________________
consensus             CATTGGTGAAGGCGGCGGAGCTAACCCCCGTGAAGAAGAGAAGGTTTAAAGTGAGGAAAA
 
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JMFN033C06+           GGGAAAGTAAAGCCGCTGCAGATTTTGCCATT                            
JMFN004D09+           GGGAAAGTAAAGCCGCTGCAGATTTTGCCATTTTAAAGGAAGTTTTTGTTTCGAGCTAA 
JMFN032F19+           GGGAAAGTAAAGCCGCTGCAGATTTTGCCATTTTAAAGGAAGTTTTTGTTTCGAGCTAAC
                      ____________________________________________________________
consensus             GGGAAAGTAAAGCCGCTGCAGATTTTGCCATTTTAAAGGAAGTTTTTGTTTCGAGCTAAC