Contig 001810:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFN004D03Sequence598001810 (12)emb|CDP21807.1|8e-58unnamed protein product, partial [Coffea canephora]
JMSF001L24Sequence336003713 (11)ref|XP_004251786.1|1e-40PREDICTED: O-acyltransferase WSD1-like [Solanum lycopersicum]729001810 (12)emb|CDP21807.1|3e-91unnamed protein product, partial [Coffea canephora]
JMSF006A12Sequence215011903 (4)381001810 (12)emb|CDP21807.1|2e-34unnamed protein product, partial [Coffea canephora]
JMSF006B12Sequence203003164 (11)406001810 (12)emb|CDP21807.1|3e-38unnamed protein product, partial [Coffea canephora]
JMSF015G22Sequence475003713 (11)ref|XP_004251786.1|2e-69PREDICTED: O-acyltransferase WSD1-like [Solanum lycopersicum]802001810 (12)emb|CDP21807.1|1e-93unnamed protein product, partial [Coffea canephora]
JMSF016O16Sequence493003713 (11)ref|XP_011012031.1|1e-46PREDICTED: O-acyltransferase WSD1-like, partial [Populus euphratica]781001810 (12)emb|CDP21807.1|4e-101unnamed protein product, partial [Coffea canephora]
JMSF028C06Sequence665003713 (11)ref|XP_009784406.1|2e-100PREDICTED: O-acyltransferase WSD1-like [Nicotiana sylvestris]732001810 (12)emb|CDP21807.1|2e-88unnamed protein product, partial [Coffea canephora]
JMSF031F24Sequence648003713 (11)emb|CDP20976.1|2e-96unnamed protein product [Coffea canephora]657001810 (12)emb|CDP21807.1|2e-79unnamed protein product, partial [Coffea canephora]
JMSF045H01Sequence712003713 (11)emb|CDP20976.1|2e-101unnamed protein product [Coffea canephora]807001810 (12)emb|CDP21807.1|2e-101unnamed protein product, partial [Coffea canephora]
JMSF046M11Sequence707003713 (11)emb|CDP20976.1|4e-110unnamed protein product [Coffea canephora]744001810 (12)emb|CDP21807.1|4e-88unnamed protein product, partial [Coffea canephora]
JMSF049F19Sequence683003713 (11)emb|CDP20976.1|1e-102unnamed protein product [Coffea canephora]744001810 (12)emb|CDP21807.1|2e-90unnamed protein product, partial [Coffea canephora]
JMSF049G06Sequence683003713 (11)emb|CDP20976.1|1e-103unnamed protein product [Coffea canephora]813001810 (12)emb|CDP21807.1|2e-101unnamed protein product, partial [Coffea canephora]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF049G06+ ATCGATCCAGCNAATNAG
                      ____________________________________________________________
consensus ATCGATCCAGCNAATNAG
 
. : . : . : . : . : . :
rJMSF049G06+ GTCCAGCTGGAGTGACGATNAACGATGTGATTTGTGGAGTAATATTCTTGGGGACTCGAT
rJMSF016O16+ AACGATGTGATTTGTGGAGTAATATTCTTGGGGACTCGAT
rJMSF001L24+ TCGAT
rJMSF045H01+ AACGATGTGATTTGTGGAGTAATATTCTTGGGGACTCGAT
rJMSF015G22+ AACGATGTGATTTGTGGAGTAATATTC-TNGGGACTCGAT
rJMSF046M11+ GAT
rJMSF049F19+ T
                      ____________________________________________________________
consensus GTCCAGCTGGAGTGACGATNAACGATGTGATTTGTGGAGTAATATTCTTGGGGACTCGAT
 
. : . : . : . : . : . :
rJMSF049G06+ TGTACATGGAAGCAACCAACCAAGAGCAAAGAAATGGGAATGCCACTGCCCTAGTGCTGC
rJMSF016O16+ TGTACATGGAAGCAACCAACCAAGAGCAAAGAAATGGGAATGCCACTGCCCTAGTGCTGC
rJMSF001L24+ TGTACATGGAAGCAACCANCCAAGAGCAAAGAAATGGGAATGCCACTGCCCTAGTGCTGC
rJMSF028C06+ AGCAACCAACCAAGAGCAAAGAAATGGGAATGCCACTGCCCTAGTGCTGC
rJMSF045H01+ TGTACATGGAAGCAACCAACCAAGAGCAAAGAAATGGGAATGCCACTGCCCTAGTGCTGC
rJMSF015G22+ TGTACATGGAAGCAACCAACCAAGAGCAAAGAAATGGGAATGCCACTGCCCTAGTGCTGC
rJMSF046M11+ TGTACATGGAAGCAACCAACCCAGAGCAAAGAAATGGGAATGCCACTGCCCTAGTGNTGC
rJMSF049F19+ TGTACATGGAAGCAACCAACCNAGAGCAAAGAAATGGGAATGCCACTGCCCTAGTGCTGC
                      ____________________________________________________________
consensus TGTACATGGAAGCAACCAACCAAGAGCAAAGAAATGGGAATGCCACTGCCCTAGTGCTGC
 
. : . : . : . : . : . :
rJMSF049G06+ TCAACACCAGGAACATTGGTGGCTACAAATCCACCAAAGAAATGGTGCACCCAAACATGG
rJMSF016O16+ TCAACACCAGGAACATTGGTGGCTACAAATCCACCAAAGAAATGGTGCACCCAAACATGG
rJMSF001L24+ TCAACACCAGGAACATTGGTGGCTACAAATCCACCAAAGAAATGGTGCACCCAAACATGG
rJMSF028C06+ TCAACACCAGGAACATTGGTGGCTACAAATCCACCAAAGAAATGGTGCACCCAAACATGG
rJMSF031F24+ CCAGGAACATTGGNGGCTACAAATCCACCAAAGAAATGGTGCACCCAAACATGG
rJMSF045H01+ TCAACACCAGGAACATTGGTGGCTACAAATCCACCAAAGAAATGGTGCACCCAAACATGG
rJMSF015G22+ TCAACACCAGGAACATTGGTGGCTACAAATCCACCAAAGAAATGGTGCACCCAAACATGG
rJMSF046M11+ TCAACACCAGGAACATTGGTGGCTACAAATCCACCAAAGAAATGGTGCACCCAAACATGG
rJMSF049F19+ TCAACACCAGGAACATTGGTGGCTACAAATCCACCAAAGAAATGGTGCACCCAAACATGG
                      ____________________________________________________________
consensus TCAACACCAGGAACATTGGTGGCTACAAATCCACCAAAGAAATGGTGCACCCAAACATGG
 
. : . : . : . : . : . :
rJMSF049G06+ AGTCCAAGTGGGGAAACCAGTTTGCATTCATGCATGTTTCTGTCCCACAATTGCCTCATA
rJMSF016O16+ AGTCCAAGTGGGGAAACCAGTTTGCATTCATGCATGTTTCTGTCCCACAATTGCCTCATA
rJMSF001L24+ AGTCCAAGTGGGGAAACCAGTTTGCATTCATGCATGTTTCTGTCCCACAATTGCCTCATA
rJMSF028C06+ AGTCCAAGTGGGGAAACCAGTTTGCATTCATGCATGTTTCTGTCCCACAATTGCCTCATA
rJMSF031F24+ AGTCCAAGTGGGGAAACCAGTTTGCATTCATGCATGTTTCTGTCCCACAATTGCCTCATA
rJMSF045H01+ AGTCCAAGTGGGGAAACCAGTTTGCATTCATGCATGTTTCTGTCCCACAATTGCCTCATA
rJMSF015G22+ AGTCCAAGTGGGGAAACCAGTTTGCATTCATGCATGTTTCTGTCCCACAATTGCCTCATA
rJMSF046M11+ AGTCCAAGTGGGGAAACCAGTTNGCATTCATGCATGTTTCTGTCCCACAATTGCCTCATA
rJMSF049F19+ AGTCCAAGTGGGGAAACCAGTTTGCATTCATGCATGTTTCTGTCCCACAATTGCCTCATA
                      ____________________________________________________________
consensus AGTCCAAGTGGGGAAACCAGTTTGCATTCATGCATGTTTCTGTCCCACAATTGCCTCATA
 
. : . : . : . : . : . :
rJMSF049G06+ CCAACACCTCAAACGCCCTCCATTTTGTATCCCAAGCTCGAGAAATCATCCACCGGAAAA
rJMSF016O16+ CCAACACCTCAAACGCCCTCCATTTTGTATCCCAAGCTCGAGAAATCATCCACCGGAAAA
rJMSF001L24+ CCAACACCTCAAACGCCCTCCATTTTGTATCCCAAGCTCGAGAAATCATCCACCGGAAAA
rJMSF028C06+ CCAACACCTCAAACGCCCTCCATTTTGTATCCCAAGCTCGAGAAATCATCCACCGGAAAA
rJMSF031F24+ CCAACACCTCAAACGCCCTCCATTTTGTATCCCAAGCTCGAGAAATCATCCACCGGAAAA
rJMSF045H01+ CCAACACCTCAAACGCCCTCCATTTTGTATCCCAAGCTCGAGAAATCATCCACCGGAAAA
rJMSF015G22+ CCAACACCTCAAACGCCCTCCATTTTGTATCCCAAGCTCGAGAAATCATCCACCGGAAAA
rJMSF046M11+ CCAACACCTCAAACGCCCTCCATTTTGTATCCCAAGCTCGAGAAATCATCCACCGGAAAA
rJMSF049F19+ CCAACACCTCAAACGCCCTCCATTTTGTATCCCAAGCTCGAGAAATCATCCACCGGAAAA
JMFN004D03- AACACCTCAAACGCCCTCCATTTTGTATCCCAAGCTCGAGAAATCATCCACCGGAAAA
                      ____________________________________________________________
consensus CCAACACCTCAAACGCCCTCCATTTTGTATCCCAAGCTCGAGAAATCATCCACCGGAAAA
 
. : . : . : . : . : . :
rJMSF049G06+ GAAATTCCTCCGCCGTTTTCCTCACCGGAAAAGTACTGGATGCTCTGCGTAAACACCAGA
rJMSF016O16+ GAAATTCCTCCGCCGTTTTCCTCACCGGAAAAGTACTGGATGCTCTGCGTAAACACCAGA
rJMSF001L24+ GAAATTCCTCCGCCGTTTTCCTCACCGGAAAAGTACTGGATGCTCTGCGTAAACACCAGA
rJMSF028C06+ GAAATTCCTCCGCCGTTTTCCTCACCGGAAAAGTACTGGATGCTCTGCGTAAACACCAGA
rJMSF031F24+ GAAATTCCTCCGCCGTTTTCCTCACCGGAAAAGTACTGGATGCTCTGCGTAAACACCAGA
rJMSF045H01+ GAAATTCCTCCGCCGTTTTCCTCACCGGAAAAGTACTGGATGCTCTGCGTAAACACCAGA
rJMSF015G22+ GAAATTCCTCCGCCGTTTTCCTCACCGGAAAAGTACTGGATGCTCTGCGTAAACACCAGA
rJMSF046M11+ GAAATTCCTCCGCCGTTTTCCTCACCGGAAAAGTACTGGATGCTCTGCGTAAACACCAGA
rJMSF049F19+ GAAATTCCTCCGCCGTTTTCCTCACCGGAAAAGTACTGGATGCTCTGCGTAAACACCAGA
JMFN004D03- GAAATTCCTCCGCCGTTTTCCTCACCGGAAAAGTACTGGATGCTCTGCGTAAACACCAGA
                      ____________________________________________________________
consensus GAAATTCCTCCGCCGTTTTCCTCACCGGAAAAGTACTGGATGCTCTGCGTAAACACCAGA
 
. : . : . : . : . : . :
rJMSF049G06+ GTCCCGAGGCCACGGCTAAATTTGTGCATAGCACCTTGAAGAACTCTAGCATGACAGTAT
rJMSF016O16+ GTCCCGAGGCCACGGCTAAATTTGTGCATAGCACCTTGAAGAACTCTAGCGTGACAGTAT
rJMSF001L24+ GTCCCGAGGCCACGGCTAAATTTGTGCATAGCACCTTGAAGAACTCTAGCATGACAGTAT
rJMSF028C06+ GTCCCGAGGCCACGGCTAAATTTGTGCATAGCACCTTGAAGAACTCTAGCATGACAGTAT
rJMSF031F24+ GTCCCGAGGCCACGGCTAAATTTGTGCATAGCACCTTGAAGAACTCTAGCATGACAGTAT
rJMSF045H01+ GTCCCGAGGCCACGGCTAAATTTGTGCATAGCACCTTGAAGAACTCTAGCATGACAGTAT
rJMSF015G22+ GTCCCGAGGCCACGGCTAAATTTGTGCATAGCACCTTGAAGAACTCTAGCATGACAGTAT
rJMSF046M11+ GTCCCGAGGCCACGGCTAAATTTGTGCATAGCACCTTGAAGAACTCTAGCATGACAGTAT
rJMSF049F19+ GTCCCGAGGCCACGGCTAAATTTGTGCATAGCACCTTGAAGAACTCTAGCATGACAGTAT
rJMSF006B12+ ATTTGTGCATAGCACCTTGAAGAACTCTAGCATGACAGTAT
rJMSF006A12+ TCTAGCATGACAGTAT
JMFN004D03- GTCCCGAGGCCACGGCTAAATTTGTGCATAGCACCTTGAAGAACTCTAGCATGACAGTAT
                      ____________________________________________________________
consensus GTCCCGAGGCCACGGCTAAATTTGTGCATAGCACCTTGAAGAACTCTAGCATGACAGTAT
 
. : . : . : . : . : . :
rJMSF049G06+ CAAATATGATTGGACCAATTGAGAAATTGGCTTTGGCTAATCATCCCATCAAAGGCATTT
rJMSF016O16+ CAAATATGATTGGACCAATTGAGAAATTGGCTTTGGCTAATCATCCCATCAAAGGCATTT
rJMSF001L24+ CAAATATGATTGGACCAATTGAGAAATTGGCTTTGGCTAATCATCCCATCAAAGGCATTT
rJMSF028C06+ CAAATATGATTGGACCAATTGAGAAATTGGCTTTGGCTAATCATCCCATCAAAGGCATTT
rJMSF031F24+ CAAATATGATTGGACCAATTGAGAAATTGGCTTTGGCTAATCATCCCATCAAAGGCATTT
rJMSF045H01+ CAAATATGATTGGACCAATTGAGAAATTGGCTTTGGCTAATCATCCCATCAAAGGCATTT
rJMSF015G22+ CAAATATGATTGGACCAATTGAGAAATTGGCTTTGGCTAATCATCCCATCAAAGGCATTT
rJMSF046M11+ CAAATATGATTGGACCAATTGAGAAATTGGCTTTGGCTAATCATCCCATCAAAGGCATTT
rJMSF049F19+ CAAATATGATTGGACCAATTGAGAAATTGGCTTTGGCTAATCATCCCATCAAAGGCATTT
rJMSF006B12+ CAAATATGATTGGACCAATTGAGAAATTGGCTTTGGCTAATCATCCCATCAAAGGCATTT
rJMSF006A12+ CAAATATGATTGGACCAATTGAGAAATTGGCTTTGGCTAATCATCCCATCAAAGGCATTT
JMFN004D03- CAAATATGATTGGACCAATTGAGAAATTGGCTTTGGCTAATCATCCCATCAAAGGCATTT
                      ____________________________________________________________
consensus CAAATATGATTGGACCAATTGAGAAATTGGCTTTGGCTAATCATCCCATCAAAGGCATTT
 
. : . : . : . : . : . :
rJMSF049G06+ ACTTCATGGTTGTTGGTGTTCCACAGAGTCTCACAATAACAATGGTGAGCTACATGAGAA
rJMSF016O16+ ACTTCATGGTTGTTGGTGTTCCACAGAGTCTCACAATAACAATGGTGAGCTACATGAGAA
rJMSF001L24+ ACTTCATGGTTGTTGGTGTTCCACAGAGTCTCACAATAACAATGGTGAGCTACATGAGAA
rJMSF028C06+ ACTTCATGGTTGTTGGTGTTCCACAGAGTCTCACAATAACAATGGTGAGCTACATGAGAA
rJMSF031F24+ ACTTCATGGTTGTTGGTGTTCCACAGAGTCTCACAATAACAATGGTGAGCTACATGAGAA
rJMSF045H01+ ACTTCATGGTTGTTGGTGTTCCACAGAGTCTCACAATAACAATGGTGAGCTACATGAGAA
rJMSF015G22+ ACTTCATGGTTGTTGGTGTTCCACAGAGTCTCACAATAACAATGGTGAGCTACATGAGAA
rJMSF046M11+ ACTTCATGGTTGTTGGTGTTCCACAGAGTCTCACAATAACAATGGTGAGCTACATGAGAA
rJMSF049F19+ ACTTCATGGTTGTTGGTGTTCCACAGAGTCTCACAATAACAATGGTGAGCTACATGAGAA
rJMSF006B12+ ACTTCATGGTTGTTGGTGTTCCACAGAGTCTCACAATAACAATGGTGAGCTACATGAGAA
rJMSF006A12+ ACTTCATGGTTGTTGGTGTTCCACAGAGTCTCACAATAACAATGGTGAGCTACATGAGAA
JMFN004D03- ACTTCATGGTTGTTGGTGTTCCACAGAGTCTCACAATAACAATGGTGAGCTACATGAGAA
                      ____________________________________________________________
consensus ACTTCATGGTTGTTGGTGTTCCACAGAGTCTCACAATAACAATGGTGAGCTACATGAGAA
 
. : . : . : . : . : . :
rJMSF049G06+ ACCTGAGGGTTGCAGTGGGAACTGAAAAAGGACTCATAAATCCTCAGAAGTACAAGGATT
rJMSF016O16+ ACCTGAGGGTTGCAGTGGGAACTGAAAAAGGACTCATAAATCCTCAGAAGTACAAGGATT
rJMSF001L24+ ACCTGAGGGTTGCAGTGGGAACTGAAAAAGGACTCATAAATCCTCAGAAGTACAAGGATT
rJMSF028C06+ ACCTGAGGGTTGCAGTGGGAACTGAAAAAGGACTCATAAATCCTCAGAAGTACAAGGATT
rJMSF031F24+ ACCTGAGGGTTGCAGTGGGAACTGAAAAAGGACTCATAAATCCTCAGAAGTACAAGGATT
rJMSF045H01+ ACCTGAGGGTTGCAGTGGGAACTGAAAAAGGACTCATAAATCCTCAGAAGTACAAGGATT
rJMSF015G22+ ACCTGAGGGTTGCAGTGGGAACTGAAAAAGGACTCATAAATCCTCAGAAGTACAAGGATT
rJMSF046M11+ ACCTGAGGGTTGCAGTGGGAACTGAAAAAGGACTCATAAATCCTCAGAAGTACAAGGATT
rJMSF049F19+ ACCTGAGGGTTGCAGTGGGAACTGAAAAAGGACTCATAAATCCTCAGAAGTACAAGGATT
rJMSF006B12+ ACCTGAGGGTTGCAGTGGGAACTGAAAAAGGACTCATAAATCCTCAGAAGTACAAGGATT
rJMSF006A12+ ACCTGAGGGTTGCAGTGGGAACTGAAAAAGGACTCATAAATCCTCAGAAGTACAAGGATT
JMFN004D03- ACCTGAGGGTTGCAGTGGGAACTGAAAAAGGACTCATAAATCCTCAGAAGTACAAGGATT
                      ____________________________________________________________
consensus ACCTGAGGGTTGCAGTGGGAACTGAAAAAGGACTCATAAATCCTCAGAAGTACAAGGATT
 
. : . : . : . : . : . :
rJMSF049G06+ GTATGCAGTGTGCCTTCGACATGATTTTCGATGCTGCCGTAGGTTCTGGTGTGCAGGAAA
rJMSF016O16+ GTATGCAGTGTGCCTTCGACATGATTTTCGATGCTGCCGTAGGTTCTGGTGTGCAGGAAA
rJMSF001L24+ GTATGCAGTGTGCCTTCGACATGATTTTCGATGCTGCCGTAGGTTCTGGTGTGCAGGAAA
rJMSF028C06+ GTATGCAGTGTGCCTTCGACATGATTTTCGATGCTGCCGTAGGTTCTGGTGTGCAGGAAA
rJMSF031F24+ GTATGCAGTGTGCCTTCGACATGATTTTCGATGCTGCCGTAGGTTCTGGTGTGCAGG--A
rJMSF045H01+ GTATGCAGTGTGCCTTCGACATGATTTTCGATGCTGCCGTAGGTTCTGGTGTGCAGGAAA
rJMSF015G22+ GTATGCAGTGTGCCTTCGACATGATTTTCGATGCTGCCGTAGGTTCTGGTGTGCAGGAAA
rJMSF046M11+ GTATGCAGTGTGCCTTCGACATGATTTTCGATGCTGCCGTAGGTTCTGGTGTGCAGGAAA
rJMSF049F19+ GTATGCAGTGTGCCTTCGACATGATTTTCGATGCTGCCGTAGGTTCTGGTGTGCAGGAAA
rJMSF006B12+ GTATGCAGTGTGCCTTCGACATGATTTTCGATGCTGCCGTAGGTTCTGGTGTGCAGGAAA
rJMSF006A12+ GTATGCAGTGTGCCTTCGACATGATTTTCGATGCTGCCGTAGGTTCTGGTGTGCAGGAAA
JMFN004D03- GTATGCAGTGTGCCTTCGACATGATTTTCGATGCTGCCGTAGGTTCTGGTGTGCAGGAAA
                      ____________________________________________________________
consensus GTATGCAGTGTGCCTTCGACATGATTTTCGATGCTGCCGTAGGTTCTGGTGTGCAGGAAA
 
. : . : . : . : . : . :
rJMSF049G06+ ATAATGCTTTTAATAATTTATACTAATAAAATACATTTATTTTTCTTTATTTAATATTCT
rJMSF016O16+ ATAATGCTTTTAATATTTTATACTAATAAAATACATTTATTTTTCTTTATTTAATATTCT
rJMSF001L24+ ATAATGCTTTTAATAATTTATACTAATAAAATACATTTATTTTTCTTTATTTAATATTCT
rJMSF028C06+ ATAATGCTTTTAATAATTTATACTAATAAAATACATTTATTTTTCTTTATTTAATATTCT
rJMSF031F24+ ATAATGCTTTTAATAATTTATACTAATAAAATACATTTATTTTTCTTTATTTAATATTCT
rJMSF045H01+ ATAATGCTTTTAATAATTTATACTAATAAAATACATTTATTTTTCTTTATTTAATATTCT
rJMSF015G22+ ATAATGCTTTTAATAATTTATACTAATAAAATACATTTATTTTTCTTTATTTAATATTCT
rJMSF046M11+ ATAATGCTTTTAATAATTTATACTAATAAAATACATTTATTTTTCTTTATTTAATATTCT
rJMSF049F19+ ATAATGCTTTTAATAATTTATACTAATAAAATACATTTATTTTTCTTTATTTAATATTCT
rJMSF006B12+ ATAATGCTTTTAATAATTTATACTAATAAAATACATTTATTTTTCTTTATTTAATATTCT
rJMSF006A12+ ATAATGCTTTTAATAATTTATACTAATAAAATACATTTATTTTTCTTTATTTAATATTCT
JMFN004D03- ATAATGCTTTTAATAATTTATACTAATAAAATACATTTATTTTTCTTTATTTAATATTCT
                      ____________________________________________________________
consensus ATAATGCTTTTAATAATTTATACTAATAAAATACATTTATTTTTCTTTATTTAATATTCT
 
. : . : . : . : . : . :
rJMSF049G06+ TTCCTAATATATCTATATACTTGAATTGTATAACAGATAC-TTTTTTTTCCTATTGGTTG
rJMSF016O16+ TTCCTAATATATCTATATACTTGAATTGTATAACAGATACTTTTTTTTTCCTATTGGTTG
rJMSF001L24+ TTCCTAATATATCTATATACTTGAATTGTATAACAGATACTTTTTTTTTCCTATTGGTTG
rJMSF028C06+ TTCCTAATATATCTATATACTTGAATTGTATAACAGATAC-TTTTTTTTCCTATTGGTTG
rJMSF031F24+ TTCCTAATATATCTATATACTTGAATTGTATAACAGATACTTTTTTTTTCCTATTGGTTG
rJMSF045H01+ TTCCTAATATATCTATATACTTGAATTGTATAACAGATACTTTTTTTTTCCTATTGGTTG
rJMSF015G22+ TTCCTAATATATCTATATACTTGAATTGTATAACAGATACTTTTTTTTTCCTATTGGTTG
rJMSF046M11+ NTCCTAATATATCTATATACTTGAATTGTATAACAGATAC-TTNTTTTTCCTATTGGTTG
rJMSF049F19+ TTCCTAATATATCTATATACTTGAATTGTATAACAGATACTTTTTTTTTCCTATTGGTTG
rJMSF006B12+ TTCCTAATATATCTATATACTTGAATTGTATAACAGATACTTTTTTTTTCCTATTGGTTG
rJMSF006A12+ TTCCTAATATATCTATATACTTGAATTGTATAACAGATACTTTTTTTTTCCTATTGGTTG
JMFN004D03- TTCCTAATATATCTATATACTTGAATTGTATAACAGATACTTTTTTTTTCCTATTGGTTG
                      ____________________________________________________________
consensus TTCCTAATATATCTATATACTTGAATTGTATAACAGATACTTTTTTTTTCCTATTGGTTG
 
. : . : . : . : . : . :
rJMSF049G06+ TAACTTGTAAACTTCA
rJMSF016O16+ TAAC
rJMSF001L24+ TAAC
rJMSF028C06+ TAACTTGTAAACTTCA
rJMSF031F24+ TAACT
rJMSF045H01+ TAACTTGTAAACTTCA
rJMSF015G22+ TAACTTGTAAACTTCAT
rJMSF046M11+ TAACTTGTAAACTTCAT
rJMSF049F19+ TAACTTGTAAACTTCAT
rJMSF006B12+ TAACT
rJMSF006A12+ TAACT
JMFN004D03- TAACTTGTAAACTTCATTTTCTTAAAATCATATATGCATATTGGTTGATGTTCTGCAAGT
                      ____________________________________________________________
consensus TAACTTGTAAACTTCATTTTCTTAAAATCATATATGCATATTGGTTGATGTTCTGCAAGT