Contig 001806:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF006J18Sequence490001806 (5)dbj|BAJ13302.1|5e-66autophagy 8 [Ipomoea nil]733001806 (5)dbj|BAJ13302.1|3e-80autophagy 8 [Ipomoea nil]
JMFF051I06Sequence561001806 (5)dbj|BAJ13302.1|3e-81autophagy 8 [Ipomoea nil]
JMFN016E22Sequence609001806 (5)dbj|BAJ13302.1|6e-81autophagy 8 [Ipomoea nil]
JMFN038A23Sequence625001806 (5)dbj|BAJ13302.1|7e-81autophagy 8 [Ipomoea nil]

Alignment

This contig is upended


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rJMFF006J18-                                           TTATATTAAAAGAAACAAGGAGAAATA
                      ____________________________________________________________
consensus                                              TTATATTAAAAGAAACAAGGAGAAATA
 
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rJMFF006J18-          AACAAAGGTGAATCCAAATAATTATTAAGATAATCTGCCACATTCTGGGAATATAGTCAA
                      ____________________________________________________________
consensus             AACAAAGGTGAATCCAAATAATTATTAAGATAATCTGCCACATTCTGGGAATATAGTCAA
 
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rJMFF006J18-          CTTGTCTGCAACTATACACAGTTAAATGCTATACATAGTGAAGCTAAAACTATTATCTGT
                      ____________________________________________________________
consensus             CTTGTCTGCAACTATACACAGTTAAATGCTATACATAGTGAAGCTAAAACTATTATCTGT
 
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rJMFF006J18-          AAAGCAAACAATAAAAGTGAACTTGGTTTTGATGAGTAATGGCAAAGCTGCAAAGAAAGT
JMFF051I06+                                                  TGGCAAAGCTGCAAAGAAAGT
                      ____________________________________________________________
consensus             AAAGCAAACAATAAAAGTGAACTTGGTTTTGATGAGTAATGGCAAAGCTGCAAAGAAAGT
 
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JMFN038A23+                                                     CCGAATGTGTTCTCCCCG
rJMFF006J18-          TTTCCCGTGGCAGTATTGGAGGTCTAAAGCATGGTGTTGTCACCGAATGTGTTCTCCCCG
JMFN016E22+                                                     CCGAATGTGTTCTCCCCG
JMFF006J18+                                                            TGTTCTCCCCG
JMFF051I06+           TTTCCCGTGGCAGTATTGGAGGTCTAAAGCATGGTGTTGTCACCGAATGTGTTCTCCCCG
                      ____________________________________________________________
consensus             TTTCCCGTGGCAGTATTGGAGGTCTAAAGCATGGTGTTGTCACCGAATGTGTTCTCCCCG
 
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JMFN038A23+           CTGTAGGTGACATAGAGGAAACCATCTTCGTCCTTCTTCTCGTCATATACAGCAGACATG
rJMFF006J18-          CTGTAGGTGACATAGAGGAAACCATCTTCGTCCTTCTTCTCGTCATATACAGCAGACATG
JMFN016E22+           CTGTAGGTGACATAGAGGAAACCATCTTCGTCCTTCTTCTCGTCATATACAGCAGACATG
JMFF006J18+           CTGTAGGTGACATAGAGGAAACCATNTTCGTCCTTCTTCTCGTCATATACAGCAGACATG
JMFF051I06+           CTGTAGGTGACATAGAGGAAACCATCTTCGTCCTTCTTCTCGTCATATACAGCAGACATG
                      ____________________________________________________________
consensus             CTGTAGGTGACATAGAGGAAACCATCTTCGTCCTTCTTCTCGTCATATACAGCAGACATG
 
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JMFN038A23+           AGTGCTCCTGTTGGTGGGAGGACATTATCAACAAATATGAAAATTGCTTTCTCCGGGCTC
rJMFF006J18-          AGTGCTCCTGTTGGTGGGAGGACATTATCAACAAATATGAAAATTGCTTTCTCCGGGCTC
JMFN016E22+           AGTGCTCCTGTTGGTGGGAGGACATTATCAACAAATATGAAAATTGCTTTCTCCGGGCTC
JMFF006J18+           AGTGCTCCTGTTGGTGGGAGGACATTATCAACAAATATGAAAATTGCTTTNTCCGGGCTC
JMFF051I06+           AGTGCTCCTGTTGGTGGGAGGACATTATCAACAAATATGAAAATTGCTTTCTCCGGGCTC
                      ____________________________________________________________
consensus             AGTGCTCCTGTTGGTGGGAGGACATTATCAACAAATATGAAAATTGCTTTCTCCGGGCTC
 
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JMFN038A23+           AACTCAATCCTTTTGCGAATCACATACACGAATTGCCCTACCGTGAGGTCAGAAGGGACG
rJMFF006J18-          AACTCAATCCTTTTGCGAATCACATACACGAATTGCCCTACCGTGAGGTCAGAAGGGACG
JMFN016E22+           AACTCAATCCTTTTGCGAATCACATACACGAATTGCCCTACCGTGAGGTCAGAAGGGACG
JMFF006J18+           AACTCAATCCTTTTGCGAATCACATACNCGAATTGCCCTACCGTGAGGTCAGAAGGGACG
JMFF051I06+           AACTCAATCCTTTTGCGAATCACATACACGAATTGCCCTACCGTGAGGTCAGAAGGGACG
                      ____________________________________________________________
consensus             AACTCAATCCTTTTGCGAATCACATACACGAATTGCCCTACCGTGAGGTCAGAAGGGACG
 
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JMFN038A23+           AGATACTTTTTCTTGTCAATGTTCGGAATGTCGCTTCTCTCTGCCTTCTCAACAATCACC
rJMFF006J18-          AGATACTTTTTCTTGTCAATGTTCGGAATGTCGCTTCTCTCTGCCTTCTCAACAATCACC
JMFN016E22+           AGATACTTTTTCTTGTCAATGTTCGGAATGTCGCTTCTCTCTGCCTTCTCAACAATCACC
JMFF006J18+           AGATACTTTTTNTTGTCAATGTTCGGAANGTCGCTTCTCTNTGCCTTNTCAACAATCACC
JMFF051I06+           AGATACTTTTTCTTGTCAATGTTCGGAATGTCGCTTCTCTCTGCCTTCTCAACAATCACC
                      ____________________________________________________________
consensus             AGATACTTTTTCTTGTCAATGTTCGGAATGTCGCTTCTCTCTGCCTTCTCAACAATCACC
 
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JMFN038A23+           GGAATTCTCTCCGAATATTTTTCCCTAATCCGGCTAGCCTCAACCCGCCTCTTCTCAAGA
rJMFF006J18-          GGAATTCTCTCCGAATATTTTTCCCTAATCCGGCTAGCCTCAACCCGCCTCTTCTCAAGA
JMFN016E22+           GGAATTCTCTCCGAATATTTTTCCCTAATCCGGCTAGCCTCAACCCGCCTCTTCTCAAGA
JMFF006J18+           GGAATTCTCTCCGAATATTTTTCCCTAATCCGGCTAGCCTCAACCCGCCTNTTNTCAAGA
JMFF051I06+           GGAATTCTCTCCGAATATTTTTCCCTAATCCGGCTAGCCTCAACCCGCCTCTTCTCAAGA
                      ____________________________________________________________
consensus             GGAATTCTCTCCGAATATTTTTCCCTAATCCGGCTAGCCTCAACCCGCCTCTTCTCAAGA
 
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JMFN038A23+           TCATGCTGTTGCTTGAATGAACTCTTCGCCATCCCGTCCGATTACAGCAACCTAGAATGA
rJMFF006J18-          TCATGCTGTTGCTTGAATGAACTCTTCGCCATCCCGTCCGATTACAGCAACCTAGAATGA
JMFN016E22+           TCATGCTGTTGCTTGAATGAACTCTTCGCCATCCCGTCCGATTACAGCAACCTAGAATGA
JMFF006J18+           TCATGCTGTTGCTTGAATGAACTNTTCGCCATCCCGTCCGATTACAGCAACCTAGAATGA
JMFF051I06+           TCATGCTGTTGCTTGAATGAACTCTTCGCCATCCCGTCCGATTACAGCAACCTAGAATGA
                      ____________________________________________________________
consensus             TCATGCTGTTGCTTGAATGAACTCTTCGCCATCCCGTCCGATTACAGCAACCTAGAATGA
 
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JMFN038A23+           TAAAGTTGGAAGAAAGCAGATTCTTTGTAGAGTCGAG                       
rJMFF006J18-          TAAAGTTGGAAGAAAGCAGATTCTTTGTAGAGTCGAGTGAATTCTTGTACTCTCTGCTTC
JMFN016E22+           TAAAGTTGGAAGAAAGCAGATTCTTTGTAGAGTCGAGTGAATTCTTGTACTCTCTGCTTC
JMFF006J18+           TAAAGTTGGAAGAAAGCAGATTCTTTGTAGAGTCGAGTGAATTCTTGTACTCTCTGCTTC
JMFF051I06+           TAAAGTTGGAAGAAAGCAGATTCTTTGTAGAGTCGAGTGAATTCTTGTACTCTCTGCTTC
                      ____________________________________________________________
consensus             TAAAGTTGGAAGAAAGCAGATTCTTTGTAGAGTCGAGTGAATTCTTGTACTCTCTGCTTC
 
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rJMFF006J18-          TATCTAGTCTAGTGTATATATATAGGGAATAGTAGTGAATGAAGTA              
JMFN016E22+           TATCTAGTCTAGTGTATATATATAGGGAA                               
JMFF006J18+           TATCTAGTCTAGTGTATATATATAGGGAATAGTAGTGAATGAAGTAGAATTTCAAAAGT 
JMFF051I06+           TATCTAGTCTAGTGTATATATATAGGGAATAGTAGTGAATGAAGTAGAATTTCAAAAGTC
                      ____________________________________________________________
consensus             TATCTAGTCTAGTGTATATATATAGGGAATAGTAGTGAATGAAGTAGAATTTCAAAAGTC