Contig 001804:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF010O11Sequence570001804 (5)emb|CAA07280.1|3e-56purple acid phosphatase [Ipomoea batatas]787001114 (4)emb|CAA07280.1|7e-159purple acid phosphatase [Ipomoea batatas]
JMFF024D08Sequence516001804 (5)emb|CAA07280.1|4e-59purple acid phosphatase [Ipomoea batatas]772001114 (4)emb|CAA07280.1|5e-144purple acid phosphatase [Ipomoea batatas]
JMFF034M18Sequence571001804 (5)emb|CAA07280.1|2e-85purple acid phosphatase [Ipomoea batatas]
JMFF051G17Sequence643001804 (5)emb|CAA07280.1|3e-57purple acid phosphatase [Ipomoea batatas]
JMSF014O04Sequence461001804 (5)emb|CAA07280.1|1e-55purple acid phosphatase [Ipomoea batatas]198001114 (4)gb|AAM64882.1|4e-19unknown [Arabidopsis thaliana]

Alignment

This contig is upended


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JMFF034M18+                                                         GGAATCATAAGTCT
                      ____________________________________________________________
consensus                                                           GGAATCATAAGTCT
 
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JMFF034M18+           GACCGAGATCCCCTATTAAACCAAATGTATAGGGAACATCCGGTCCAGGTTTGGGAGGAG
                      ____________________________________________________________
consensus             GACCGAGATCCCCTATTAAACCAAATGTATAGGGAACATCCGGTCCAGGTTTGGGAGGAG
 
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JMFF034M18+           TAACAAACCAAAACTGTCGTTTTGCATCCCCGACCCCTAGTTCATAATAGTATTTTGTAT
JMSF014O04+                                                   TTCATAATAGTATTTTGTAT
JMFF010O11+                                     TCCCCGACCCNTAGTTCATAATAGTATTTTGTAT
JMFF024D08+                                     TCCCCGACCCCTAGTTCATAATAGTATTTTGTAT
JMFF051G17+                                 TGCATCCCCGACCCNTAGTTCATAATAGTATTTTGTAT
                      ____________________________________________________________
consensus             TAACAAACCAAAACTGTCGTTTTGCATCCCCGACCCCTAGTTCATAATAGTATTTTGTAT
 
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JMFF034M18+           CGTACTCTAAACCCTTGATGGTGCAGTGATGAATATAGCCGGATGTGTAATTATAAAACT
JMSF014O04+           CGTACTCTAAACCCTTGATGGTGCAGTGATGAATATAGCCGGATGTGTAATTATAAAACT
JMFF010O11+           CGTACTCTAAACCCTTGATGGTGCAGTGATGAATATAGCCGGATGTGTAATTATAAAACT
JMFF024D08+           CGTACTCTAAACCCTTGATGGTGCAGTGATGAATATAGCCGGATGTGTAATTATAAAACT
JMFF051G17+           CGTACTCTAAACCCTNGATGGTGCAGTGATGAATATAGCCGGATGTGTAATTATAAAACT
                      ____________________________________________________________
consensus             CGTACTCTAAACCCTTGATGGTGCAGTGATGAATATAGCCGGATGTGTAATTATAAAACT
 
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JMFF034M18+           TGTAGGTCACGACAACGCCATCTGCACGCCTCTTGACACTGCTATTCTCGGCCCAATAAA
JMSF014O04+           TGTAGGTCACGACAACGCCATCTGCACGCCTCTTGACACTGCTATTCTCGGCCCAATAAA
JMFF010O11+           TGTAGGTCACGACAACGCCATCTGCACGCCTCTTGACACTGCTATTCTCGGCCCAATAAA
JMFF024D08+           TGTAGGTCACGACAACGCCATCTGCACGCCTCTTGACACTGCTATTCTCGGCCCAATAAA
JMFF051G17+           TGTAGGTCACGACAACGCCATCTGCACGCCTCTTGACACTGCTATTCTCGGCCCAATAAA
                      ____________________________________________________________
consensus             TGTAGGTCACGACAACGCCATCTGCACGCCTCTTGACACTGCTATTCTCGGCCCAATAAA
 
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JMFF034M18+           CCACCGTTTTCGAGCCAGGCTCTTCGGGTGTAACCCAAGAGATAATCACACCTTTCCCTT
JMSF014O04+           CCACCGTTTTCGAGCCAGGCTCTTCGGGTGTAACCCAAGAGATAATCACACCTTTCCCTT
JMFF010O11+           CCACCGTTTTCGAGCCAGGCTCTTCGGGTGTAACCCAAGAGATAATCACACCTTTCCCTT
JMFF024D08+           CCACCGTTTTCGAGCCAGGCTCTTCGGGTGTGACCCAAGAGATAATCACACCTTTCCCTT
JMFF051G17+           CCACCGTTTTCGAGCCAGGCTCTTCGGGTGTAACCCAAGAGATAATCACACCTTTCCCTT
                      ____________________________________________________________
consensus             CCACCGTTTTCGAGCCAGGCTCTTCGGGTGTAACCCAAGAGATAATCACACCTTTCCCTT
 
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JMFF034M18+           CATAATCCCCTTGTGTTATATGGACCTGCTGGGGGGCATTGTAACCAGGAGGGGCTGTGA
JMSF014O04+           CATAATCCCCTTGTGTTATATGGACCTGCTGGGGGGCATTGTAACCAGGAGGGGCTGTGA
JMFF010O11+           CATAATCCCCTTGTGTTATATGGACCTGCTGGGGGGCATTGTAACCAGGAGGGGCTGTGA
JMFF024D08+           CATAATCCCCTTGTGTTATATGGACCTGCTGGGGGGCATTGTAACCAGGAGGGGCTGTGA
JMFF051G17+           CATAATCCCCTTGTGTTATATGGACCTGCTGGGGGGCATTGTAACCAGGAGGGGCTGTGA
                      ____________________________________________________________
consensus             CATAATCCCCTTGTGTTATATGGACCTGCTGGGGGGCATTGTAACCAGGAGGGGCTGTGA
 
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JMFF034M18+           AGACATCACTATCCAAAGGCATATCATCAATATCTGAGGATTCTGAGCTCAACCCATTCT
JMSF014O04+           AGACATCACTATCCAAAGGCATATCATCAATATCTGAGGATTCTGAGCTCAACCCATTCT
JMFF010O11+           AGACATCACTATCCAAAGGCATATCATCAATATCTGAGGATTCTGAGCTCAACCCATTCT
JMFF024D08+           AGACATCACTATCCAAAGGCATATCATCAATATCTGAGGATTCTGAGCTCAACCCATTCT
JMFF051G17+           AGACATCACTATCCAAAGGCATATCATCAATATCTGAGGATTCTGAGCTCAACCCATTCT
                      ____________________________________________________________
consensus             AGACATCACTATCCAAAGGCATATCATCAATATCTGAGGATTCTGAGCTCAACCCATTCT
 
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JMFF034M18+           TCCTCGCATAGCTACTGGTCACCCCAGCATCACACAACAGAGAAAAACTCAAGATCAAGC
JMSF014O04+           TCCTCGCATAGCTACTGGTCACCCCAGCATCACACAACAGAGAAAAACTCAAGATCAAGC
JMFF010O11+           TCCTCGCATAGCTACTGGTCACCCCAGCATCACACAACAGAGAAAAACTCAAGATCAAGC
JMFF024D08+           TCCTCGCATAGCTACTGGTCACCCCAGCATCACACAACAGAGAAAAACTCAAGATCAAGC
JMFF051G17+           TCCTCGCATAGCTACTGGTCACCCCAGCATCACACAACAGAGAAAAACTCAAGATCAAGC
                      ____________________________________________________________
consensus             TCCTCGCATAGCTACTGGTCACCCCAGCATCACACAACAGAGAAAAACTCAAGATCAAGC
 
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JMFF034M18+           CCAATCCCAAGCATAAAAATCCGAGCTTCAAGTAGCCCATTCTTTTAGATTGGGATGAAG
JMSF014O04+           CCAATCCCAAGCATAAAAATCCGAGCTTCAAGTAGCCCATTCTTTTAGATTGGGATGAAG
JMFF010O11+           CCAATCCCAAGCATAAAAATCCGAGCTTCAAGTAGCCCATTCTTTTAGATTGGGATGAAG
JMFF024D08+           CCAATCCCAAGCATAAAAATCCGAGCTTCAAGTAGCCCATTCTTTTAGATTGGGATGAAG
JMFF051G17+           CCAATCCCAAGCATAAAAATCCGAGCTTCAAGTAGCCCATTCTTTTAGATTGGGATGAAG
                      ____________________________________________________________
consensus             CCAATCCCAAGCATAAAAATCCGAGCTTCAAGTAGCCCATTCTTTTAGATTGGGATGAAG
 
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JMFF034M18+           TTCCAATCTCAAATCTC                                           
JMSF014O04+           TTCCAATCTCAAATCTCCC                                         
JMFF010O11+           TTCCAATCTCAAATCTCCCAGAAAAAGAAACCAACTTTTATAAGAAATTTATAATATTAG
JMFF024D08+           TTCCAATCTCAAATCTCCCAGAAAAAGAAACCAACTTTTATAAGAAATTTATAATATT  
JMFF051G17+           TTCCAATCTCAAATCTCCCAGAAAAAGAAACCAACTTTTATAAGAAATTTATAATATTAG
                      ____________________________________________________________
consensus             TTCCAATCTCAAATCTCCCAGAAAAAGAAACCAACTTTTATAAGAAATTTATAATATTAG
 
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JMFF010O11+           AGTACAGGATTTGGGCAAGGTGCAAGGAATATTCCACCCTGAAAGTTTGGTCAAAT    
JMFF051G17+           AGTACAGGATTTGGGCAAGGTGCAAGGAATATTCCACCCTGAAAGTTTGGTCAAATAGGT
                      ____________________________________________________________
consensus             AGTACAGGATTTGGGCAAGGTGCAAGGAATATTCCACCCTGAAAGTTTGGTCAAATAGGT
 
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JMFF051G17+           AGAGTGTACTTGAGGATTTCTTATAGGTATTGTTCAAGAAAGGGAAAGTGGAATCTCCGG
                      ____________________________________________________________
consensus             AGAGTGTACTTGAGGATTTCTTATAGGTATTGTTCAAGAAAGGGAAAGTGGAATCTCCGG