Contig 001796:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF001F17Sequence524001796 (4)ref|XP_006366869.1|4e-63PREDICTED: serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B'784012208 (2)ref|XP_009797723.1|1e-117PREDICTED: serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B'
JMFF002K16Sequence561001796 (4)ref|XP_006366869.1|4e-37PREDICTED: serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B'756011213 (4)ref|XP_009797723.1|1e-27PREDICTED: serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B'
JMFF042J23Sequence648001796 (4)ref|XP_009797723.1|2e-87PREDICTED: serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B'
JMFF049L22Sequence646001796 (4)ref|XP_006366869.1|2e-52PREDICTED: serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B'575011213 (4)

Alignment

This contig is upended


. : . : . : . : . : . :
JMFF042J23+ TCATACACGAGCTGTAAAT
                      ____________________________________________________________
consensus TCATACACGAGCTGTAAAT
 
. : . : . : . : . : . :
JMFF042J23+ GGTACCAGGCGGGATCGAAGAACAGTTCTTCATCCTCGCTCTCGCCCCGAGCATGGGAGG
                      ____________________________________________________________
consensus GGTACCAGGCGGGATCGAAGAACAGTTCTTCATCCTCGCTCTCGCCCCGAGCATGGGAGG
 
. : . : . : . : . : . :
JMFF001F17+ TACAAACTGCAGCAA
JMFF042J23+ CACACTTTGGTGGGAAATCTCTAAACAGGTTAACCGCACACATTCTACAAACTGCAGCAA
                      ____________________________________________________________
consensus CACACTTTGGTGGGAAATCTCTAAACAGGTTAACCGCACACATTCTACAAACTGCAGCAA
 
. : . : . : . : . : . :
JMFF001F17+ TTGCTGATTCGGTGCATTTCACCGACCCCGAGGCAACAAAATCGTTGAGCTCGAGTAATA
JMFF042J23+ TTGCTGATTCGGTGCATTTCACCGACCCCGAGGCAACAAAATCGTTGAGCTCGAGTAATA
                      ____________________________________________________________
consensus TTGCTGATTCGGTGCATTTCACCGACCCCGAGGCAACAAAATCGTTGAGCTCGAGTAATA
 
. : . : . : . : . : . :
JMFF001F17+ CCTGACGCTTCAGATCTTTCTCAGCTGCGTTCTTGTCTGGATCACCGAAATCATAAACCG
JMFF042J23+ CCTGACGCTTCAGATCTTTCTCAGCTGCGTTCTTGTCTGGATCACCGAAATCATAAACCG
JMFF002K16+ GGATCACTGAAATCATACACGG
JMFF049L22+ CTTCAGATCTTTCTCCGCTGAGTTCTTATCCGGATCACTGAAATCATACACGG
                      ____________________________________________________________
consensus CCTGACGCTTCAGATCTTTCTCAGCTGCGTTCTTGTCTGGATCACTGAAATCATACACGG
 
. : . : . : . : . : . :
JMFF001F17+ AGCAGCAAAGGTTCAGTTTACTCACAAGCAGGCCTTGTTTCTCGCCATTCGAAACATCCT
JMFF042J23+ AGCAGCAAAGGTTCAGTTTACTCACAAGCAGGCCTTGTTTCTCGCCATTCGAAACATCCT
JMFF002K16+ AGCAGCAGAGGTTCAGTTTACTCAAAAACAAGCCTTGCTTTTCCCCATTCGAAACATCTT
JMFF049L22+ AGCAGCAGAGGTTCAGTTTACTCAAAAACAAGCCTTGCTTTTCCCCATTCGAAACATCTN
                      ____________________________________________________________
consensus AGCAGCAGAGGTTCAGTTTACTCACAAGCAGGCCTTGTTTTTCGCCATTCGAAACATCTT
 
. : . : . : . : . : . :
JMFF001F17+ TAAAGCACAAATGTGGCGAAATGGATT---CCCCTCCCGCCACAATGCTGGCGGGGAAAA
JMFF042J23+ TAAAGCACAAATGTGGCGAAATGGATT---CCCCTCCCGCCACAATGCTGGCGGGGAAAA
JMFF002K16+ TAAAGCACAAATGCGGTGCAATAGACTCCCCCCCTCCAGCCACAATGTTCGCTGGGAAAA
JMFF049L22+ TAAAGCACAAATGCGGTGCAATAGACTCCCCCCCTCCAGCCACAATGTTCGCTGGGAAAA
                      ____________________________________________________________
consensus TAAAGCACAAATGTGGTGCAATGGATTCCCCCCCTCCCGCCACAATGTTGGCTGGGAAAA
 
. : . : . : . : . : . :
JMFF001F17+ TTGCTGATGACACGCGTTTCACTACATTTAGCCGGTTCACTATGACATTGCAGCTGTTAG
JMFF042J23+ TTGCTGATGACACGCGTTTCACTACATTTAGCCGGTTCGCTATGACATTGCAGCTGTTAG
JMFF002K16+ TCGCGGATGACATGCGTTTCACTACATTAAGCCGGTTCGCTATGACATTGCAGCTGTTTG
JMFF049L22+ TCGCGGATGACATGCGTTTCACTACATTAAGCCGGTTCGCTATGACATTGCAGCTGTTTG
                      ____________________________________________________________
consensus TTGCTGATGACATGCGTTTCACTACATTTAGCCGGTTCGCTATGACATTGCAGCTGTTTG
 
. : . : . : . : . : . :
JMFF001F17+ TGAACTGCATCCCATTGCCCGAGTTCGTAGG
JMFF042J23+ TGAACTGCATCCCATTGCCCGAGTTCGTAGG
JMFF002K16+ TAAACTGAACCCCATTGCCCGAGTTCGTAGGGTTGTTGAACGAATTGCTCAAAGACGAAT
JMFF049L22+ TAAACTGAACCCCATTGCCCGAGTTCGTAGGGTTGTTGAACGAATTGCTCAAAGACGAAT
                      ____________________________________________________________
consensus TGAACTGCATCCCATTGCCCGAGTTCGTAGGGTTGTTGAACGAATTGCTCAAAGACGAAT
 
. : . : . : . : . : . :
JMFF002K16+ CTTTTGGGTCCGATTTCAGTGATTTCCGAGGAATTTTCGCAAGAATTTGCTTAAGCATAG
JMFF049L22+ CTTTTGGGTCCGATTTCAGTGATTTCCGAGGAATTTTCGCAAGAATTTGCTTAAGCATAG
                      ____________________________________________________________
consensus CTTTTGGGTCCGATTTCAGTGATTTCCGAGGAATTTTCGCAAGAATTTGCTTAAGCATAG
 
. : . : . : . : . : . :
JMFF002K16+ TAGCAACGCTTGAAGTTGCAGCCAAGAGTGGACCTGGGTTAGTGTGGGTCTGATGAGCGA
JMFF049L22+ TAGCAACGCTTGAAGTTGCAGCCAAGAGTGGACCTGGGTTAGTGTGGGTCTGATGAGCGA
                      ____________________________________________________________
consensus TAGCAACGCTTGAAGTTGCAGCCAAGAGTGGACCTGGGTTAGTGTGGGTCTGATGAGCGA
 
. : . : . : . : . : . :
JMFF002K16+ TGAGGAAAGAAGAAAAGGGCATAAAGATTCCTGGGAGAATTAGCAGAGATGAATAAGAAG
JMFF049L22+ TGAGGAAAGAAGAAAAGGGCATAAAGATTCCTGGGAGAATTAGCAGAGATGAATAAGAAG
                      ____________________________________________________________
consensus TGAGGAAAGAAGAAAAGGGCATAAAGATTCCTGGGAGAATTAGCAGAGATGAATAAGAAG
 
. : . : . : . : . : . :
JMFF002K16+ AAGAAGAAGAAGAAGAAGAGAATGCAGGAATACTAAAACCAGCAGGGAGAGAGAGGGGAG
JMFF049L22+ AAGAAGAAGAAGAAGAAGAGAATGCAGGAATACTAAAACCAGCAGGGAGAGAGAGGGGAG
                      ____________________________________________________________
consensus AAGAAGAAGAAGAAGAAGAGAATGCAGGAATACTAAAACCAGCAGGGAGAGAGAGGGGAG
 
. : . : . : . : . : . :
JMFF002K16+ AGTGTGGAATCACATCACATCATGGTCTTCCTCTTTTAGCTTTGAATTGAAGACACAAG
JMFF049L22+ AGTGTGGAATCACATCACATCATGGTCTTCCTCTTTTAGCTTTGAATTGAAGACACAAGC
                      ____________________________________________________________
consensus AGTGTGGAATCACATCACATCATGGTCTTCCTCTTTTAGCTTTGAATTGAAGACACAAGC