Contig 001757:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF042A12Sequence565001757 (2)ref|XP_011088988.1|2e-23PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 isoform X2 [Sesamum indicum]565001757 (2)ref|XP_011088988.1|2e-23PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 isoform X2 [Sesamum indicum]

Alignment

This contig is upended


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rJMFF042A12+                                             TCATTATGGAAGCATGGGAGGAGGG
JMFF042A12-                                              TCATTATGGAAGCATGGGAGGAGGG
                      ____________________________________________________________
consensus                                                TCATTATGGAAGCATGGGAGGAGGG
 
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rJMFF042A12+          CACTACACTGCATTTGTTCGTCAAGGTGGTGAACAATGGTATGACTTTGACGACAGCCAT
JMFF042A12-           CACTACACTGCATTTGTTCGTCAAGGTGGTGAACAATGGTATGACTTTGACGACAGCCAT
                      ____________________________________________________________
consensus             CACTACACTGCATTTGTTCGTCAAGGTGGTGAACAATGGTATGACTTTGACGACAGCCAT
 
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rJMFF042A12+          GTTTCACCCGTCAGCGTGGAGAAGATAAAAACTTCAGCTGCCTATGTTCTGTTCTATAGA
JMFF042A12-           GTTTCACCCGTCAGCGTGGAGAAGATAAAAACTTCAGCTGCCTATGTTCTGTTCTATAGA
                      ____________________________________________________________
consensus             GTTTCACCCGTCAGCGTGGAGAAGATAAAAACTTCAGCTGCCTATGTTCTGTTCTATAGA
 
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rJMFF042A12+          AGAGTTGAAGAAAACGATATAGAAGAGATGAACAAGACCATCGTTAGGTGCTAGGGTACT
JMFF042A12-           AGAGTTGAAGAAAACGATATAGAAGAGATGAACAAGACCATCGTTAGGTGCTAGGGTACT
                      ____________________________________________________________
consensus             AGAGTTGAAGAAAACGATATAGAAGAGATGAACAAGACCATCGTTAGGTGCTAGGGTACT
 
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rJMFF042A12+          GAACAAGGCTTCACATTTATCCGCAAGTCTTGTAAAGAATCACATCTGTTGTGTTGTTCT
JMFF042A12-           GAACAAGGCTTCACATTTATCCGCAAGTCTTGTAAAGAATCACATCTGTTGTGTTGTTCT
                      ____________________________________________________________
consensus             GAACAAGGCTTCACATTTATCCGCAAGTCTTGTAAAGAATCACATCTGTTGTGTTGTTCT
 
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rJMFF042A12+          TTGGTGGCAGGCATATAGTTGGCAATTTTGGGGTCATCGCGGAAATGTTAGTGTGGCGAT
JMFF042A12-           TTGGTGGCAGGCATATAGTTGGCAATTTTGGGGTCATCGCGGAAATGTTAGTGTGGCGAT
                      ____________________________________________________________
consensus             TTGGTGGCAGGCATATAGTTGGCAATTTTGGGGTCATCGCGGAAATGTTAGTGTGGCGAT
 
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rJMFF042A12+          AAGGATAACCGTATAATACTTGAGAGTAGGGAACGACGGATGGTGAGGCGAAAGGGTTGA
JMFF042A12-           AAGGATAACCGTATAATACTTGAGAGTAGGGAACGACGGATGGTGAGGCGAAAGGGTTGA
                      ____________________________________________________________
consensus             AAGGATAACCGTATAATACTTGAGAGTAGGGAACGACGGATGGTGAGGCGAAAGGGTTGA
 
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rJMFF042A12+          TACAACGCGGGAAAAGTCTTACATCTATAACAAATTCTTTGTGATACAAGACCCAAGTTT
JMFF042A12-           TACAACGCGGGAAAAGTCTTACATCTATAACAAATTCTTTGTGATACAAGACCCAAGTTT
                      ____________________________________________________________
consensus             TACAACGCGGGAAAAGTCTTACATCTATAACAAATTCTTTGTGATACAAGACCCAAGTTT
 
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rJMFF042A12+          TTTGCTTGATTACCTAACAGGAAAGAAGAAGAAGCTAAGGGTAGCTTGAAATAGATTGCA
JMFF042A12-           TTTGCTTGATTACCTAACAGGAAAGAAGAAGAAGCTAAGGGTAGCTTGAAATAGATTGCA
                      ____________________________________________________________
consensus             TTTGCTTGATTACCTAACAGGAAAGAAGAAGAAGCTAAGGGTAGCTTGAAATAGATTGCA
 
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rJMFF042A12+          TAGTGCACATGTAAAATATTCTCTAAAATTCTTTATAGCAATTGTACTAATTACAACATT
JMFF042A12-           TAGTGCACATGTAAAATATTCTCTAAAATTCTTTATAGCAATTGTACTAATTACAACATT
                      ____________________________________________________________
consensus             TAGTGCACATGTAAAATATTCTCTAAAATTCTTTATAGCAATTGTACTAATTACAACATT