Contig 001749:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF022P24Sequence515001749 (4)ref|XP_009613735.1|127PREDICTED: uncharacterized protein LOC104106809 [Nicotiana tomentosiformis] ref|507001749 (4)ref|XP_004236262.1|132PREDICTED: uncharacterized protein LOC101267394 [Solanum lycopersicum]
JMFF040M06Sequence592001749 (4)ref|XP_009613735.1|127PREDICTED: uncharacterized protein LOC104106809 [Nicotiana tomentosiformis] ref|578001749 (4)ref|XP_009613735.1|127PREDICTED: uncharacterized protein LOC104106809 [Nicotiana tomentosiformis] ref|

Alignment

This contig is upended


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rJMFF040M06+                  GAGAAATTCAAAGCATTTTGAAAAGAGTTTCGAGGCGGATTCAAAGGGAAGG
JMFF022P24-                   GAGAAATTCAAAGCATTTTGAAAAGAGTTTCGAGGCGGATTCAAAGGGAAGG
rJMFF022P24+                                                               GGGAAGG
JMFF040M06-                   GAGAAATTCAAAGCATTTTGAAAAGAGTTTCGAGGCGGATTCAAAGGGAAGG
                      ____________________________________________________________
consensus                     GAGAAATTCAAAGCATTTTGAAAAGAGTTTCGAGGCGGATTCAAAGGGAAGG
 
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rJMFF040M06+          ATAGAATGTTGCAGTTTCCGGCATTCATGCTACAGTACCCTTGGTCTACTGAGACAATTC
JMFF022P24-           ATAGAATGTTGCAGTTTCCGGCATTCATGCTACAGTACCCTTGGTCTACTGAGACAATTC
rJMFF022P24+          ATAGAATGTTGCAGTTTCCGGCATTCATGCTACAGTACCCTTGGTCTACTGAGACAATTC
JMFF040M06-           ATAGAATGTTGCAGTTTCCGGCATTCATGCTACAGTACCCTTGGTCTACTGAGACAATTC
                      ____________________________________________________________
consensus             ATAGAATGTTGCAGTTTCCGGCATTCATGCTACAGTACCCTTGGTCTACTGAGACAATTC
 
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rJMFF040M06+          CGACGTCGTATCTTCTTCCTGCCCAGTGGCCCCATCCCCAGAGCGATGAGCTCCTCCTTG
JMFF022P24-           CGACGTCGTATCTTCTTCCTGCCCAGTGGCCCCATCCCCAGAGCGATGAGCTCCTCCTTG
rJMFF022P24+          CGACGTCGTATCTTCTTCCTGCCCAGTGGCCCCATCCCCAGAGCGATGAGCTCCTCCTTG
JMFF040M06-           CGACGTCGTATCTTCTTCCTGCCCAGTGGCCCCATCCCCAGAGCGATGAGCTCCTCCTTG
                      ____________________________________________________________
consensus             CGACGTCGTATCTTCTTCCTGCCCAGTGGCCCCATCCCCAGAGCGATGAGCTCCTCCTTG
 
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rJMFF040M06+          CCATGGAGGAGTCAGATTTTGAAGAAAAGTGCAGTGAGATCGGAAAGATTAACAGCAACT
JMFF022P24-           CCATGGAGGAGTCAGATTTTGAAGAAAAGTGCAGTGAGATCGGAAAGATTAACAGCAACT
rJMFF022P24+          CCATGGAGGAGTCAGATTTTGAAGAAAAGTGCAGTGAGATCGGAAAGATTAACAGCAACT
JMFF040M06-           CCATGGAGGAGTCAGATTTTGAAGAAAAGTGCAGTGAGATCGGAAAGATTAACAGCAACT
                      ____________________________________________________________
consensus             CCATGGAGGAGTCAGATTTTGAAGAAAAGTGCAGTGAGATCGGAAAGATTAACAGCAACT
 
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rJMFF040M06+          TAACTGTGATCGGGAAGACCAATGTAGTTGATAACGATAAAGAAGATTTTGACAATGAAG
JMFF022P24-           TAACTGTGATCGGGAAGACCAATGTAGTTGATAACGATAAAGAAGATTTTGACAATGAAG
rJMFF022P24+          TAACTGTGATCGGGAAGACCAATGTAGTTGATAACGATAAAGAAGATTTTGACAATGAAG
JMFF040M06-           TAACTGTGATCGGGAAGACCAATGTAGTTGATAACGATAAAGAAGATTTTGACAATGAAG
                      ____________________________________________________________
consensus             TAACTGTGATCGGGAAGACCAATGTAGTTGATAACGATAAAGAAGATTTTGACAATGAAG
 
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rJMFF040M06+          CCGAGGATGACGATGTTGATAATGGAGAAGAGTCTGAAGGTGATGACTTCGATCAGGAAA
JMFF022P24-           CCGAGGATGACGATGTTGATAATGGAGAAGAGTCTGAAGGTGATGACTTCGATCAGGAAA
rJMFF022P24+          CCGAGGATGACGATGTTGATAATGGAGAAGAGTCTGAAGGTGATGACTTCGATCAGGAAA
JMFF040M06-           CCGAGGATGACGATGTTGATAATGGAGAAGAGTCTGAAGGTGATGACTTCGATCAGGAAA
                      ____________________________________________________________
consensus             CCGAGGATGACGATGTTGATAATGGAGAAGAGTCTGAAGGTGATGACTTCGATCAGGAAA
 
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rJMFF040M06+          CCGGTTGACTGCCATAAAACGTCGTAAGTTTCATCCAACGCAACTATGCTTTAGACTGCT
JMFF022P24-           CCGGTTGACTGCCATAAAACGTCGTAAGTTTCATCCAACGCAACTATGCTTTAGACTGCT
rJMFF022P24+          CCGGTTGACTGCCATAAAACGTCGTAAGTTTCATCCAACGCAACTATGCTTTAGACTGCT
JMFF040M06-           CCGGTTGACTGCCATAAAACGTCGTAAGTTTCATCCAACGCAACTATGCTTTAGACTGCT
                      ____________________________________________________________
consensus             CCGGTTGACTGCCATAAAACGTCGTAAGTTTCATCCAACGCAACTATGCTTTAGACTGCT
 
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rJMFF040M06+          CTGCTTCTTTGAGTTCTTTCCAACGCTTATGCACTCTCAGCTGACTTTGTAATTCTGCAT
JMFF022P24-           CTGCTTCTTTGAGTTCTTTCCAACGCTTATGCACTCTCAGCTGACTTTGTAATTCTGCAT
rJMFF022P24+          CTGCTTCTTTGAGTTCTTTCCAACGCTTATGCACTCTCAGCTGACTTTGTAATTCTGCAT
JMFF040M06-           CTGCTTCTTTGAGTTCTTTCCAACGCTTATGCACTCTCAGCTGACTTTGTAATTCTGCAT
                      ____________________________________________________________
consensus             CTGCTTCTTTGAGTTCTTTCCAACGCTTATGCACTCTCAGCTGACTTTGTAATTCTGCAT
 
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rJMFF040M06+          TTGGTGCCAATACTTTATTGATTAAAAACCAAATCTTTGTATCATGTAACAATTACTTCA
JMFF022P24-           TTGGTGCCAATACTTTATTGATTAAAAACCAAATCTTTGTATC                 
rJMFF022P24+          TTGGTGCCAATACTTTATTGATTAAAAACCAAATCTTTGTATCATGTAACAATTACTTCA
JMFF040M06-           TTGGTGCCAATACTTTATTGATTAAAAACCAAATCTTTGTATCATGTAACAATTACTTCA
                      ____________________________________________________________
consensus             TTGGTGCCAATACTTTATTGATTAAAAACCAAATCTTTGTATCATGTAACAATTACTTCA
 
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rJMFF040M06+          AAATTTTAAGTGACAATGGACATATTCGAGCTCTTGAATCAACACT              
rJMFF022P24+          AAATTTTAAG                                                  
JMFF040M06-           AAATTTTAAGTGACAATGGACATATTCGAGCTCTTGAATCAACACTCAGCTCGTTCTCAA
                      ____________________________________________________________
consensus             AAATTTTAAGTGACAATGGACATATTCGAGCTCTTGAATCAACACTCAGCTCGTTCTCAA