Contig 001746:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF005P10Sequence349001746 (5)ref|XP_011088387.1|6e-28PREDICTED: cyclase-associated protein 1 [Sesamum indicum]692011064 (5)gb|KDO49088.1|7e-100hypothetical protein CISIN_1g016407mg [Citrus sinensis]
JMFF014N20Sequence517001746 (5)emb|CDO97057.1|3e-64unnamed protein product [Coffea canephora]690011064 (5)gb|KDO49088.1|4e-74hypothetical protein CISIN_1g016407mg [Citrus sinensis]
JMFF023L03Sequence496001746 (5)emb|CDO97057.1|9e-61unnamed protein product [Coffea canephora]725011064 (5)gb|KDO49088.1|9e-98hypothetical protein CISIN_1g016407mg [Citrus sinensis]
JMFF033D21Sequence586001746 (5)emb|CDO97057.1|3e-83unnamed protein product [Coffea canephora]775011064 (5)gb|KDO49088.1|9e-119hypothetical protein CISIN_1g016407mg [Citrus sinensis]
JMFF040A08Sequence608001746 (5)emb|CDO97057.1|6e-81unnamed protein product [Coffea canephora]694011064 (5)ref|XP_006423253.1|9e-73hypothetical protein CICLE_v10028340mg [Citrus clementina] ref|XP_006487151.1| P

Alignment

This contig is upended


. : . : . : . : . : . :
JMFF033D21+ ATTGTAAAACTCAGC
JMFF040A08+ AACTCAGC
                      ____________________________________________________________
consensus ATTGTAAAACTCAGC
 
. : . : . : . : . : . :
JMFF033D21+ CATCTGCCAGCTTTCTTCAACATGGGCTATGGGCATGCTCATACCGCAATCTTTTCCTGT
JMFF040A08+ CATCTGCCAGCTTTCTTCAACATGGGCTATGGGCATGCTCATACCGCAATCTTTTCCTGT
                      ____________________________________________________________
consensus CATCTGCCAGCTTTCTTCAACATGGGCTATGGGCATGCTCATACCGCAATCTTTTCCTGT
 
. : . : . : . : . : . :
JMFF033D21+ GTAGGCAATCCATGCCAGAGCCGTTAAACTATCAGTGGCAGCCTTTAAATGGTTGAAGAA
JMFF014N20+ CCATGCCAGAGCCGTTAAACTATCAGTGGCAGCCTTTAAATGGTTGAAGAA
JMFF023L03+ CCATGCCAGAGCCGTTAAACTATCAGTGGCAGCCTTTAAATGGTTGAAGAA
JMFF040A08+ GTAGGCAATCCATGCCAGAGCCGTTAAACTATCAGTGGCAGCCTTTAAATGGTTGAAGAA
                      ____________________________________________________________
consensus GTAGGCAATCCATGCCAGAGCCGTTAAACTATCAGTGGCAGCCTTTAAATGGTTGAAGAA
 
. : . : . : . : . : . :
JMFF033D21+ ATCAGATCTCCGCCCTTCTGTCAACGATGATCCCCTCATAATTACTTCATTCAAAGGCTT
JMFF014N20+ ATCAGATCTCCGCCCTTCTGTCAACGATGATCCCCTCATAATTACTTCATTCAAAGGCTT
JMFF023L03+ ATCAGATCTCCGCCCTTCTGTCAACGATGATCCCCTCATAATTACTTCATTCAAAGGCTT
JMFF040A08+ ATCAGATCTCCGCCCTTCTGTCAACGATGATCCCCTCATAATTACTTCATTCAAAGGCTT
                      ____________________________________________________________
consensus ATCAGATCTCCGCCCTTCTGTCAACGATGATCCCCTCATAATTACTTCATTCAAAGGCTT
 
. : . : . : . : . : . :
JMFF033D21+ CAAGAACTCACTGAGACCCTTCATGTCAGGTTTCTGAATTCCCTTGGTTTTGATTAGAAG
JMFF014N20+ CAAGAACTCACTGAGACCCTTCATGTCAGGTTTCTGAATTCCCTTGGTTTTGATTAGAAG
JMFF023L03+ CAAGAACTCACTGAGACCCTTCATGTCAGGTTTCTGAATTCCCTTGGTTTTGATTAGAAG
JMFF005P10+ CTTGGTTTTGATTAGAAG
JMFF040A08+ CAAGAACTCACTGAGACCCTTCATGTCAGGTTTCTGAATTCCCTTGGTTTTGATTAGAAG
                      ____________________________________________________________
consensus CAAGAACTCACTGAGACCCTTCATGTCAGGTTTCTGAATTCCCTTGGTTTTGATTAGAAG
 
. : . : . : . : . : . :
JMFF033D21+ CTCCTTCTGAGCAGAGAATGCATCCTTTACAATCTTAGTAGCATCCAAAACTTGTCCTCC
JMFF014N20+ CTCCTTCTGAGCAGAGAATGCATCCTTTACAATCTTAGTAGCATCCAAAACTTGTCCTCC
JMFF023L03+ CTCCTTCTGAGCAGAGAATGCATCCTTTACAATCTTAGTAGCATCCAAAACTTGTCCTCC
JMFF005P10+ CTCCTTNTGAGCAGAGAATGCATCCTTTACAATCNTAGTAGCATCCAAAACTTGTCCTCC
JMFF040A08+ CTCCTTCTGAGCAGAGAATGCATCCTTTACAATCTTAGTAGCATCCAAAACTTGTCCTCC
                      ____________________________________________________________
consensus CTCCTTCTGAGCAGAGAATGCATCCTTTACAATCTTAGTAGCATCCAAAACTTGTCCTCC
 
. : . : . : . : . : . :
JMFF033D21+ AATCTTCTCAGCAGCACTCGACAGCCTCCCGACGCACTGCGAAATCAGATCTTCGAATGC
JMFF014N20+ AATCTTCTCAGCAGCACTCGACAGCCTCCCGACGCACTGCGAAATCAGATCTTCGAATGC
JMFF023L03+ AATCTTCTCAGCAGCACTCGACAGCCTCCCGACGCACTGCGAAATCAGATCTTCGAATGC
JMFF005P10+ AATCTTCTCAGCAGCACTCGACAGCCTCCCGACGCACTGCGAAATCAGATCTTCGAATGC
JMFF040A08+ AATCTTCTCAGCAGCACTCGACAGCCTCCCGACGCACTGCGAAATCAGATCTTCGAATGC
                      ____________________________________________________________
consensus AATCTTCTCAGCAGCACTCGACAGCCTCCCGACGCACTGCGAAATCAGATCTTCGAATGC
 
. : . : . : . : . : . :
JMFF033D21+ AACGATCGATGGATCCGACGCCGCCGCACTAACGTCAACCTCACGCGAAGTTCCATGGCC
JMFF014N20+ AACGATCGATGGATCCGACGCCGCCGCACTAACGTCAACCTCACGCGAAGTTCCATGGCC
JMFF023L03+ AACGATCGATGGATCCGACGCCGCCGCACTAACGTCAACCTCACGCGAAGTTCCATGGCC
JMFF005P10+ AACGATCGATGGATCCGACGCCGCCGCACTAACGTCAACCTCACGCGAAGTTCCATGGCC
JMFF040A08+ AACGATCGATGGATCCGACGCCGCCGCACTAACGTCAACCTCACGCGAAGTTCCATGGCC
                      ____________________________________________________________
consensus AACGATCGATGGATCCGACGCCGCCGCACTAACGTCAACCTCACGCGAAGTTCCATGGCC
 
. : . : . : . : . : . :
JMFF033D21+ AAATCCGCCGGTGGACAGCGTCTCCAGTCGAGCTACCGCCGACTCCAACCGCTGTATCAA
JMFF014N20+ AAATCCGCCGGTGGACAGCGTCTCCAGTCGAGCTACCGCCGACTCCAACCGCTGTATCAA
JMFF023L03+ AAATCCGCCGGTGGACAGCGTCTCCAGTCGAGCTACCGCCGACTCCAACCGCTGTATCAA
JMFF005P10+ AAATCCGCCGGTGGACAGCGTCTCCAGTCGAGCTACCGCCGACTCCAACCGCTGTATCAA
JMFF040A08+ AAATCCGCCGGTGGACAGCGTCTCCAGTCGAGCTACCGCCGACTCCAACCGCTGTATCAA
                      ____________________________________________________________
consensus AAATCCGCCGGTGGACAGCGTCTCCAGTCGAGCTACCGCCGACTCCAACCGCTGTATCAA
 
. : . : . : . : . : . :
JMFF033D21+ CTTCTCATCCATCTCAATTCTCAACTAAGGATTCACTCCCTCTCTAAACTTCTCCCGCTC
JMFF014N20+ CTTCTCATCCATCTCAATTCTCAACTAAGGATTCACTCCCTCTCTAAACTTCTCCCGCTC
JMFF023L03+ CTTCTCATCCATCTCAATTCTCAACTAAGGATTCACTCCCTCTCTAAACTTCTCCCGCTC
JMFF005P10+ CTTCTCATCCATCTCAATTCTCAACTAAGGATTCACTCCCTCTCTAAACTTCTCCCGCTC
JMFF040A08+ CTTCTCATCCATCTCAATTCTCAACTAAGGATTCACTCCCTCTCTAAACTTCTCCCGCTC
                      ____________________________________________________________
consensus CTTCTCATCCATCTCAATTCTCAACTAAGGATTCACTCCCTCTCTAAACTTCTCCCGCTC
 
. : . : . : . : . : . :
JMFF033D21+ TAGACTTGGAGTTGAAGTAGATCTGAATAA
JMFF014N20+ TAGACTTGGAGTTGAAGTAGATCTGAATAA
JMFF023L03+ TAAACTT
JMFF005P10+ TAGACTTGGAGTTGAAGTAGATCTGAATAA
JMFF040A08+ TAGACTTGGAGTTGAAGTAGATCTGAATAATGAAGACTACTGCTTGCACATATGCTTCAT
                      ____________________________________________________________
consensus TAGACTTGGAGTTGAAGTAGATCTGAATAATGAAGACTACTGCTTGCACATATGCTTCAT