| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF032E06 | Sequence | 573 | 001726 (4) | ref|XP_010087267.1| | 1e-105 | Putative E3 ubiquitin-protein ligase [Morus notabilis] gb|EXB28669.1| Putative E | 782 | 002768 (3) | ref|XP_006343859.1| | 5e-69 | PREDICTED: putative E3 ubiquitin-protein ligase UBR7-like [Solanum tuberosum] |
| JMFF034M23 | Sequence | 595 | 001726 (4) | ref|XP_010087267.1| | 2e-79 | Putative E3 ubiquitin-protein ligase [Morus notabilis] gb|EXB28669.1| Putative E | |||||
| JMSF008F04 | Sequence | 355 | 001726 (4) | ref|XP_008341585.1| | 2e-43 | PREDICTED: putative E3 ubiquitin-protein ligase UBR7 isoform X2 [Malus domestic | 752 | 002768 (3) | ref|XP_006343859.1| | 6e-68 | PREDICTED: putative E3 ubiquitin-protein ligase UBR7-like [Solanum tuberosum] |
| JMSF043M21 | Sequence | 628 | 001726 (4) | ref|XP_010087267.1| | 3e-107 | Putative E3 ubiquitin-protein ligase [Morus notabilis] gb|EXB28669.1| Putative E | 629 | 002768 (3) | ref|XP_006343859.1| | 4e-59 | PREDICTED: putative E3 ubiquitin-protein ligase UBR7-like [Solanum tuberosum] |
This contig is upended
. : . : . : . : . : . :
JMFF032E06+ CATGTCAGAAGACTCCAGGCCAAGATGCTCCTC
JMSF043M21+ CGTCTCTTGGAACCTGCATGTCAGAAGACTCCAGGCCAAGATGCTCCTC
____________________________________________________________
consensus CGTCTCTTGGAACCTGCATGTCAGAAGACTCCAGGCCAAGATGCTCCTC
. : . : . : . : . : . :
JMFF032E06+ ATGAAACCAGTCCTCACAGACACAGCACTGAATCATCTCCGGTTGTTCTTCAGCATCTGG
JMSF043M21+ ATGAAACCAGTCCTCACAGACACAGCACTGAATCATCTCCGGTTGTTCTTCAGCATCTGG
____________________________________________________________
consensus ATGAAACCAGTCCTCACAGACACAGCACTGAATCATCTCCGGTTGTTCTTCAGCATCTGG
. : . : . : . : . : . :
JMFF032E06+ ATCAGGATATGGGCGACCACAAGTGCAGTATAGACCTCTGAAATTATGGTTGTACAAGTT
JMSF043M21+ ATCAGGATATGGGCGACCACAAGTGCAGTATAGACCTCTGAAATTATGGTTGTACAAGTT
JMFF034M23+ GATATGGGCGACCACAAGTGCAGTATAGACCTCTGAAATTATGGTNGTACAAGTT
____________________________________________________________
consensus ATCAGGATATGGGCGACCACAAGTGCAGTATAGACCTCTGAAATTATGGTTGTACAAGTT
. : . : . : . : . : . :
JMFF032E06+ CTGTGGATTTTCTACGTCTTTGCTTGCAAGAAGCTTACAGAAGAATTCCCCAAATTTTGA
JMSF043M21+ CTGTGGATTTTCTACGTCTTTGCTTGCAAGAAGCTTACAGAAGAATTCCCCAAATTTTGA
JMFF034M23+ CTGTGGATTTTCTACGTCTTTGCTTGCAAGAAGCTTACAGAAGAATTCCCCAAATTTTGA
____________________________________________________________
consensus CTGTGGATTTTCTACGTCTTTGCTTGCAAGAAGCTTACAGAAGAATTCCCCAAATTTTGA
. : . : . : . : . : . :
JMFF032E06+ ATTTCCACAATCACACCGAAAGTTTCTCTTGGTCCAGAGCTCCACAATCTCATGACCATC
JMSF043M21+ ATTTCCACAATCACACCGAAAGTTTCTCTTGGTCCAGAGCTCCACAATCTCATGACCATC
JMSF008F04+ AATCTCATGACCATC
JMFF034M23+ ATTTCCACAATCACACCGAAAGTTTCTCTTGGTCCAGAGCTCCACAATCTCATGACCATC
____________________________________________________________
consensus ATTTCCACAATCACACCGAAAGTTTCTCTTGGTCCAGAGCTCCACAATCTCATGACCATC
. : . : . : . : . : . :
JMFF032E06+ ATGACAGGACAAACTACAAGCAGTGCAAACCCCCGCATTTCCATCTGGTGTGCAAGTCAA
JMSF043M21+ ATGACAGGACAAACTACAAGCAGTGCAAACCCCCGCATTTCCATCTGGTGTGCAAGTCAA
JMSF008F04+ ATGACAGGACAAACTACAAGCAGTGCAAACCCCCGCATTTCCATCTGGTGTGCAAGTCAA
JMFF034M23+ ATGACAGGACAAACTACAAGCAGTGCAAACCCCCGCATTTCCATCTGGTGTGCAAGTCAA
____________________________________________________________
consensus ATGACAGGACAAACTACAAGCAGTGCAAACCCCCGCATTTCCATCTGGTGTGCAAGTCAA
. : . : . : . : . : . :
JMFF032E06+ ACAAGAAAAAATGGCCTGTCTTTTCATATAGCCATTGTTATATGTGCATTCCTTTCCCTC
JMSF043M21+ ACAAGAAAAAATGGCCTGTCTTTTCATATAGCCATTGTTATATGTGCATTCCTTTCCCTC
JMSF008F04+ ACAAGAAAAAATGGCCTGTCTTTTCATATAGCCATTGTTATATGTGCATTCCTTTCCCTC
JMFF034M23+ ACAAGAAAAAATGGCCTGTCTTTTCATATAGCCATTGTTATATGTGCATTCCTTTCCCTC
____________________________________________________________
consensus ACAAGAAAAAATGGCCTGTCTTTTCATATAGCCATTGTTATATGTGCATTCCTTTCCCTC
. : . : . : . : . : . :
JMFF032E06+ ATCACCACCCAAAACCAAATCTGCTTCCAGTTCCTGTTCTTCGACATCCTTAAGGTACTC
JMSF043M21+ ATCACCACCCAAAACCAAATCTGCTTCCAGTTCCTGTTCTTCGACATCCTTAAGGTACTC
JMSF008F04+ ATCACCACCCAAAACCAAATCTGCTTCCAGTTCCTGTTCTTCGACATCCTTAAGGTACTC
JMFF034M23+ ATCACCACCCAAAACCAAATCTGCTTCCAGTTCCTGTTCTTCGACATCCTTAAGGTACTC
____________________________________________________________
consensus ATCACCACCCAAAACCAAATCTGCTTCCAGTTCCTGTTCTTCGACATCCTTAAGGTACTC
. : . : . : . : . : . :
JMFF032E06+ TCCAATTGAAACCGTGGGCTCAGCTTCTTCTTCAAAAGCATCAGTCATGACGACTGGCGA
JMSF043M21+ TCCAATTGAAACCGTGGGCTCAGCTTCTTCTTCAAAAGCATCAGTCATGACGACTGGCGA
JMSF008F04+ TCCAATTGAAACCGTGGGCTCAGCTTCTTCTTCAAAAGCATCAGTCATGACGACTGGCGA
JMFF034M23+ TCCAATTGAAACCGTGGGCTCAGCTTCTTCTTCAAAAGCATCAGTCATGACGACTGGCGA
____________________________________________________________
consensus TCCAATTGAAACCGTGGGCTCAGCTTCTTCTTCAAAAGCATCAGTCATGACGACTGGCGA
. : . : . : . : . : . :
JMFF032E06+ AGGCCCCAAAATCAAAGAAAATTAAAAAAAGATTGGTGTTTTGTGCTGGGAAGCAGTTCC
JMSF043M21+ AGGCCCCAAAATCAAAGAAAATTAAAAAAAGATTGGTGTTTTGTGCTGGGAAGCAGTTCC
JMSF008F04+ AGGCCCCAAAATCAAAGAAAATTAAAAAAAGATTGGTGTTTTGTGCTGGGAAGCAGTTCC
JMFF034M23+ AGGCCCCAAAATCAAAGAAAATTAAAAAAAGATTGGTGTTTTGTGCTGGGAAGCAGTTCC
____________________________________________________________
consensus AGGCCCCAAAATCAAAGAAAATTAAAAAAAGATTGGTGTTTTGTGCTGGGAAGCAGTTCC
. : . : . : . : . : . :
JMSF043M21+ GGAAAACCCTAGGCAATTGAAGAGGTTGAGGAAAATGG
JMSF008F04+ GGAAAACCCTAGGCAATTGAAGAGGTTGAGGAAAATGG
JMFF034M23+ GGAAAACCCTAGGCAATTGAAGAGGTTGAGGAAAATGGGGAGCTTAATGGGCTCTGAGAG
____________________________________________________________
consensus GGAAAACCCTAGGCAATTGAAGAGGTTGAGGAAAATGGGGAGCTTAATGGGCTCTGAGAG
. : . : . : . : . : . :
JMFF034M23+ ACAGGCTTTTATACAACAACTCCTTCGCCCAAAGGGCTGGACACACTTTCCAGCCAAATT
____________________________________________________________
consensus ACAGGCTTTTATACAACAACTCCTTCGCCCAAAGGGCTGGACACACTTTCCAGCCAAATT