Contig 001714:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF031P13Sequence538001714 (6)ref|XP_004245662.1|8e-93PREDICTED: probable rhamnose biosynthetic enzyme 1 [Solanum lycopersicum]684001714 (6)ref|XP_011072055.1|1e-106PREDICTED: bifunctional dTDP-4-dehydrorhamnose 3,5-epimerase/dTDP-4-dehydrorhamn
JMFF050F12Sequence586001714 (6)ref|XP_004245662.1|2e-104PREDICTED: probable rhamnose biosynthetic enzyme 1 [Solanum lycopersicum]399001714 (6)ref|XP_004143938.1|3e-25PREDICTED: probable rhamnose biosynthetic enzyme 1-like [Cucumis sativus] ref|X
JMFS150C03Sequence462001714 (6)ref|XP_004245662.1|2e-71PREDICTED: probable rhamnose biosynthetic enzyme 1 [Solanum lycopersicum]
JMSF036L06Sequence631001714 (6)emb|CDP09826.1|9e-122unnamed protein product [Coffea canephora]595018280

Alignment

This contig is upended


. : . : . : . : . : . :
rJMFF050F12- CAAAACATTGGTGAAAAATTCTTTACAGGGCTAATCCCAAATTATTCTTATTGAAA
rJMFF031P13- TTACAGTGCTAATCCCAAATTATTCATATTGAAA
                      ____________________________________________________________
consensus CAAAACATTGGTGAAAAATTCTTTACAGTGCTAATCCCAAATTATTCTTATTGAAA
 
. : . : . : . : . : . :
rJMFF050F12- TATGAGAGAAGATACAACTTTCAATACCCAACAAGCCTACTTTTGGATAAACAAAACCTG
rJMFF031P13- TATGAGAGAAGATACAACATTCAATACACAACAAGCCTACATTTGGATAAACAGAACCTG
                      ____________________________________________________________
consensus TATGAGAGAAGATACAACTTTCAATACCCAACAAGCCTACTTTTGGATAAACAGAACCTG
 
. : . : . : . : . : . :
rJMFF050F12- GGAAATGTAAACTTCCCCCCGATCAACATTGTACCAAAATCAAAAAAAAATATAAATTCT
rJMFF031P13- TGAAATGTAGACTTCACACCGATCAACATTGTACCAAAATCANAAAAAAATATAAATTCT
                      ____________________________________________________________
consensus TGAAATGTAGACTTCCCCCCGATCAACATTGTACCAAAATCAAAAAAAAATATAAATTCT
 
. : . : . : . : . : . :
rJMFF050F12- TGAAAAAAAATTCAAACCACTTATAAGGGTCAAGCAACGGGGGTCTTACAATTTGGCTTG
rJMFF031P13- TGAAATAAAATTCAAACCACTTATAAGGTTCAAGCAACGGGGGTCTTACGATTTGGCTTG
                      ____________________________________________________________
consensus TGAAATAAAATTCAAACCACTTATAAGGTTCAAGCAACGGGGGTCTTACGATTTGGCTTG
 
. : . : . : . : . : . :
rJMFF050F12- AACACGTATTGTATGAGGGACTCCTTGATCGACATGAGTTCCGGGAATTCCTTCTTTAAC
rJMFF031P13- AACACGTATTGTATGAGGGACTCCTTGATCGACATGAGTTCCGGGAATTCCTTCTTTAGC
                      ____________________________________________________________
consensus AACACGTATTGTATGAGGGACTCCTTGATCGACATGAGTTCCGGGAATTCCTTCTTTAGC
 
. : . : . : . : . : . :
rJMFF050F12- TTGGTAGCGCCAAGCTCATTGTTGCTTCTTGGAACAACTAAAACCTTTGCCTGCTCCTCG
rJMFF031P13- TTGGTAGCGTCAAGCTCATTGTTGCTTCTTGGAGCAACTATAACCTTTGCCTGCTCCTCN
                      ____________________________________________________________
consensus TTGGTAGCGTCAAGCTCATTGTTGCTTCTTGGAGCAACTATAACCTTTGCCTGCTCCTCG
 
. : . : . : . : . : . :
rJMFF050F12- AGGGAAAAGTTCTTCCACGTAAAACATGGATCAATGAATTCCC
rJMFF031P13- AGGGTAAAGTTCTTCCACGTAAAACATGGATCAATGTATTCCCTGTACATCTCCAGAATC
                      ____________________________________________________________
consensus AGGGTAAAGTTCTTCCACGTAAAACATGGATCAATGTATTCCCTGTACATCTCCAGAATC
 
. : . : . : . : . : . :
rJMFF031P13- TCGTTATGGCTGACCACTCCAGGGTTCGTGAAGTTCCATATCCCGGTGAGGTTTCTCTTT
                      ____________________________________________________________
consensus TCGTTATGGCTGACCACTCCAGGGTTCGTGAAGTTCCATATCCCGGTGAGGTTTCTCTTT
 
. : . : . : . : . : . :
rJMFF031P13- GCCATCTCGATGGATATAGGGAGGAGCTCGTCTAATATTGTCATCGAGTTTGGAATGTTA
                      ____________________________________________________________
consensus GCCATCTCGATGGATATAGGGAGGAGCTCGTCTAATATTGTCATCGAGTTTGGAATGTTA
 
. : . : . : . : . : . :
rJMFF031P13- ACCACCTTCTCGTAGCGAGCGATCTTGGTGATGAAGTTACGAGGGTTGGATAGATCAGAT
JMSF036L06+ CTCGTAGCGAGCGATCTTGGTGATGAAGTTACGAGGGTTGGATAGATCAGAT
                      ____________________________________________________________
consensus ACCACCTTCTCGTAGCGAGCGATCTTGGTGATGAAGTTACGAGGGTTGGATAGATCAGAT
 
. : . : . : . : . : . :
rJMFF031P13- GAGATAGGCATCCTCACTCGTAATGTGCAGACATTCTCATAGTTCTTGAGCAAATCCTCC
JMSF036L06+ GAGATAGGCATCCTCACTCGTAATGTGCAGACATTCTCATAGTTCTTGAGCAAATCCTCC
JMFF050F12+ GGCATCCTCACTCGTAATGTGCAGACATTCTCATAGGTCTTGAGCAAATCCTCC
                      ____________________________________________________________
consensus GAGATAGGCATCCTCACTCGTAATGTGCAGACATTCTCATAGTTCTTGAGCAAATCCTCC
 
. : . : . : . : . : . :
rJMFF031P13- ACCATGGCTTTGGTCTTGGAATAGAA
JMSF036L06+ ACCATGGCTTTGGTCTTGGAATAGAAGGACCCAATGAAATTAGGAGTGTCCTCCTCCTTG
JMFF050F12+ ACCATGGCTTTGGTCTTGGAATAGAAGGACCCAATGAAATTAGGAGTGTCCTCCTCCTAG
JMFF031P13+ CATGGCTTTGGTCTTGGAATAGAAGGACCCAATGAAATTAGGAGTGTCCCCCTCCTTG
                      ____________________________________________________________
consensus ACCATGGCTTTGGTCTTGGAATAGAAGGACCCAATGAAATTAGGAGTGTCCTCCTCCTTG
 
. : . : . : . : . : . :
JMSF036L06+ AAGCCGACGCCGGATCCGAGAACGTGGCCGGAATCGTACTCGAAAATGCAGCCGGTGGCG
JMFF050F12+ AAGCCGACGCCGGATCCGAGAACGTGGCCGGAATCGTACTCGAAAATGCAGCCGGTGGCG
JMFS150C03+ GGAATCGTACTGAGAAATGCAGCCGGTGGAG
JMFF031P13+ AAGCCGACGCCGGATCCGAGAACGTGGCCGGAATCGTACTCGAAAATGCAGCCGGTGGCG
                      ____________________________________________________________
consensus AAGCCGACGCCGGATCCGAGAACGTGGCCGGAATCGTACTCGAAAATGCAGCCGGTGGCG
 
. : . : . : . : . : . :
JMSF036L06+ AAGTTAATGAGCACCAGCCCCTTCTCCCTGCAGACGTCGGCGAGCGTGAGCGTGCCCACA
JMFF050F12+ AAGTTAATGAGCACCAGCCCCTTCTCCCTGCAGACGTCGGCGAGCGTGAGCGTGCCCACA
JMFS150C03+ GAGTTAATGAGCACCAGCCCTTTCTCCCTGCAGACGTCGGCGAGCGTGAGCGTGCCCACA
JMFF031P13+ AAGTTAATGAGCACCAGCCCCTTCTCCCTGCAGACGTCGGCGAGCGTGAGCGTGCCCACA
                      ____________________________________________________________
consensus AAGTTAATGAGCACCAGCCCCTTCTCCCTGCAGACGTCGGCGAGCGTGAGCGTGCCCACA
 
. : . : . : . : . : . :
JMSF036L06+ ACGTTGGCCCGGATGGTCTCCACCTTGTGGGACTCGCACCAGTCGACGTTCGGGCGGCCG
JMFF050F12+ ACGTTGGCCCGGATGGTCTCCACCTTGTGGGACTCGCACCAGTCGACGTTCGGGCGGCCG
JMFS150C03+ ACGTTGGCCCGGATGGTCTCCACCTTGTGGGACTCGCACCAGTCGACGTTCGGGCGGCCG
JMFF031P13+ ACGTTGGCCCGGATGGTCTCCACCTTGTGGGACTCGCACCAGTCGACGTTCGGGCGGCCG
                      ____________________________________________________________
consensus ACGTTGGCCCGGATGGTCTCCACCTTGTGGGACTCGCACCAGTCGACGTTCGGGCGGCCG
 
. : . : . : . : . : . :
JMSF036L06+ GTGACTCCGGCGGCGTTGAATACGTGGGTCGGGTTGACGGATGCGATGTCGGACTCCAAA
JMFF050F12+ GTGACTCCGGCGGCGTTGAATACGTGGGTCGGGTTGACGGATGCGATGTCGGACTCCAAA
JMFS150C03+ GTGACTCCGGCGGCGTTGAATACGTGGGTCGGGTTGACGGATGCGATGTCGGACTCCAAA
JMFF031P13+ GTGACTCCGGCGGCGTTGAATACGTGGGTCGGGTTGACGGATGCGATGTCGGACTCCAAA
                      ____________________________________________________________
consensus GTGACTCCGGCGGCGTTGAATACGTGGGTCGGGTTGACGGATGCGATGTCGGACTCCAAA
 
. : . : . : . : . : . :
JMSF036L06+ GATACCCGGTTCTCCAACCGCCCAGACCCGTAAGCGTAGTGGATCCCCTGAGCCTCGCAC
JMFF050F12+ GATACCCGGTTCTCCAACCGCCCAGACCCGTAAGCGTAGTGGATCCCCTGAGCCTCGCAC
JMFS150C03+ GATACCCGGTTCTCCAACCGCCCAGACCCGTAAGCGTAGTGGATCCCCTGAGCCTCGCAC
JMFF031P13+ GATACCCGGTTCTCCAACCGCCCAGACCCGTAAGCGTAGTGGATCCCCTGAGCCTCGCAC
                      ____________________________________________________________
consensus GATACCCGGTTCTCCAACCGCCCAGACCCGTAAGCGTAGTGGATCCCCTGAGCCTCGCAC
 
. : . : . : . : . : . :
JMSF036L06+ AGTTTGCCCAGCACACCGCCAATCCACCCGGTGCGGCCATAGATCAAGAACTTATACTGC
JMFF050F12+ AGTTTGCCCAGCACACCGCCAATCCACCCGGTGCGGCCATAGATCAAGGACTTATACTGC
JMFS150C03+ AGTTTGCCCAGCACACCGCCAATCCACCCGGTGCGGCCATAGATCAAGAACTTATACTGC
JMFF031P13+ AGTTTGCCCAGCACACCGCCAATCCACCCGGTGCGGCCATAGATCAAGAACTTATACTGC
                      ____________________________________________________________
consensus AGTTTGCCCAGCACACCGCCAATCCACCCGGTGCGGCCATAGATCAAGAACTTATACTGC
 
. : . : . : . : . : . :
JMSF036L06+ TTGGTTTCTGAGCCACTAACCGGGAAACCCATTGCGCCAAAAGCTGCTCAAATCAAATGG
JMFF050F12+ TTGGTTCCTGAGCCACTAACCGGGAAACCCATTGCGCCAAAAGCTGCTCAAATCAAATGG
JMFS150C03+ TTGGTTTCTGAGCCACTAACCGGGAAACCCATTGCGCCAAAAGCTGCTCAAATCAAATGG
JMFF031P13+ TTGGTTTCTGAGCCACTAACCGGGAAACCCATTGCGCCAAAAGCTGCTCAAATCAAATGG
                      ____________________________________________________________
consensus TTGGTTTCTGAGCCACTAACCGGGAAACCCATTGCGCCAAAAGCTGCTCAAATCAAATGG
 
. : . : . : . : . : . :
JMSF036L06+ AAAACGTATGTTCAATATAGACTATACTGCATACACCT
JMFF050F12+ AAAACGTATGTTCAATATAGACTATACTGCATACACCTAGCTAGCTCT
JMFS150C03+ AAAACGTATGTTCAA
JMFF031P13+ AAAACGTATGTTCAATATAGACTATACTGCATACACCTAGCTAGCTCTTCGTGCGTATAT
                      ____________________________________________________________
consensus AAAACGTATGTTCAATATAGACTATACTGCATACACCTAGCTAGCTCTTCGTGCGTATAT