Contig 001713:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF003M13Sequence523001713 (12)ref|XP_009615859.1|1e-81PREDICTED: NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial-like [763008125 (9)ref|XP_009122464.1|6e-75PREDICTED: NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial [Brass
JMFF007M12Sequence619001713 (12)ref|XP_009615859.1|1e-71PREDICTED: NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial-like [800008125 (9)ref|XP_009131078.1|1e-108PREDICTED: NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial-like [
JMFF012H11Sequence557001713 (12)ref|XP_009615859.1|3e-91PREDICTED: NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial-like [785008125 (9)ref|XP_009131078.1|6e-111PREDICTED: NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial-like [
JMFF013H01Sequence582001713 (12)ref|XP_009615859.1|1e-97PREDICTED: NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial-like [287008125 (9)gb|AFK41633.1|6e-53unknown [Medicago truncatula]
JMFF021D04Sequence371001713 (12)ref|XP_009615859.1|1e-35PREDICTED: NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial-like [
JMFF022O19Sequence521001713 (12)ref|XP_009615859.1|4e-90PREDICTED: NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial-like [715008125 (9)ref|XP_010491494.1|9e-87PREDICTED: NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial-like [
JMFF024D09Sequence508001713 (12)ref|XP_009615859.1|9e-82PREDICTED: NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial-like [801008125 (9)ref|XP_009131078.1|1e-108PREDICTED: NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial-like [
JMFF025O21Sequence586001713 (12)ref|XP_009615859.1|5e-106PREDICTED: NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial-like [741008125 (9)ref|XP_010491494.1|8e-93PREDICTED: NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial-like [
JMFF031M14Sequence526001713 (12)ref|XP_009615859.1|9e-48PREDICTED: NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial-like [708008125 (9)ref|XP_010452860.1|2e-84PREDICTED: NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial-like [
JMFF032H18Sequence374001713 (12)ref|XP_009615859.1|1e-46PREDICTED: NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial-like [821008125 (9)ref|XP_009131078.1|9e-111PREDICTED: NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial-like [
JMFS008D06Sequence622001713 (12)ref|XP_009615859.1|7e-118PREDICTED: NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial-like [
JMSF006G20Sequence375001713 (12)ref|XP_009615859.1|2e-45PREDICTED: NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial-like [

Alignment

This contig is upended


. : . : . : . : . : . :
JMFS008D06+ TTTCCTAGCCTTCTCAAGG
                      ____________________________________________________________
consensus TTTCCTAGCCTTCTCAAGG
 
. : . : . : . : . : . :
JMFS008D06+ TTCTTTCTTTCATTCACATACTCACCCCTGATGTAAATATATGCAGCTTGAGCTCTCATT
JMFF025O21+ ATGTAAATATATGCAGCTTGAGCTCTCATT
JMFF007M12+ TTTCATTCACATACTCACCCCTGATGTAAATATATGCAGCTTGAGCTCTCATT
                      ____________________________________________________________
consensus TTCTTTCTTTCATTCACATACTCACCCCTGATGTAAATATATGCAGCTTGAGCTCTCATT
 
. : . : . : . : . : . :
JMFS008D06+ CCCACTCCTGCAATCAAACAGCCTTCCAACAATTTGTGCGGATCATGCCGCATTATTTCT
JMFF022O19+ GTGCGGATCATGCCGCATTATTTCT
JMFF025O21+ CCCACTCCTGCAATCAAACAGCCTTCCAACAATTTGTGCGGATCATGCCGCATTATTTCT
JMFF007M12+ CCCACTCCTGCAATCAAACAGCCTTCCAACAATTTGTGCGGATCATGCCGCATTATT--T
JMFF013H01+ CTCCTGCAATCAAACAGCCTTCCAACAATTTGTGCGGATCATGCCGCATTATTTCT
JMFF012H11+ ATTTGTGCGGATCATGCCGCATTATTTCT
                      ____________________________________________________________
consensus CCCACTCCTGCAATCAAACAGCCTTCCAACAATTTGTGCGGATCATGCCGCATTATTTCT
 
. : . : . : . : . : . :
JMFS008D06+ CTATCTTTACACGTACCAGGTTCACTTTCATCAGCATTGACAACTAGATATGAAGGGCGG
JMFF022O19+ CTATCTTTACACGTACCAGGTTCACTTTCATCAGCATTGACAACTAGATATGAAGGGCGG
JMFF025O21+ CTATCTTTACACGTACCAGGTTCACTTTCATCAGCATTGACAACTAGATATGAAGGGCGG
JMFF007M12+ CTATCTTTACACGTACCAGGTTCACTTTCATCAGCATTGACAACTAGATATGAAGGGCGG
JMFF013H01+ CTATCTTTACACGTACCAGGTTCACTTTCATCAGCATTGACAACTAGATATGAAGGGCGG
JMFF024D09+ CTTTACACGTACCAGGTTCACTTTCATCAGCATTGACAACTAGATATGAAGGGCGG
JMFF012H11+ CTATCTTTACACGTACCAGGTTCACTTTCATCAGCATTGACAACTAGATATGAAGGGCGG
JMFF003M13+ TTTACACGTACCAGGTTCACTTTCATCAGCATTGACAACTAGATATGAAGGGCGG
                      ____________________________________________________________
consensus CTATCTTTACACGTACCAGGTTCACTTTCATCAGCATTGACAACTAGATATGAAGGGCGG
 
. : . : . : . : . : . :
JMFS008D06+ CCATCAGAAGTCTTTGGCATGAAGGACCATTTAAGACCAGATGGAAAACCAGCACCACCT
JMFF022O19+ CCATCAGAAGTCTTTGGCATGAAGGACCATTTAAGACCAGATGGAAAACCAGCACCACCT
JMFF025O21+ CCATCAGAAGTCTTTGGCATGAAGGACCATTTAAGACCAGATGGAAAACCAGCACCACCT
JMFF007M12+ CCATCAGAAGTCTTTGGCATGAAGGACCATTTAAGACCAGATGGAAAACCAGCACCACCT
JMFF013H01+ CCATCAGAAGTCTTTGGCATGAAGGACCATTTAAGACCAGATGGAAAACCAGCACCACCT
JMFF024D09+ CCATCAGAAGTCTTTGGCATGAAGGACCATTTAAGACCAGATGGAAAACCAGCACCACCT
JMFF012H11+ CCATCAGAAGTCTTTGGCATGAAGGACCATTTAAGACCAGATGGAAAACCAGCACCACCT
JMFF003M13+ CCATCAGAAGTCTTTGGCATGAAGGACCATTTAAGACCAGATGGAAAACCAGCACCACCT
                      ____________________________________________________________
consensus CCATCAGAAGTCTTTGGCATGAAGGACCATTTAAGACCAGATGGAAAACCAGCACCACCT
 
. : . : . : . : . : . :
JMFS008D06+ CGTCCTCGAAGTCCTGA-TTTTTTAACTTCATTGACAATCCAATCAGTACCTTTTAGTAC
JMFF022O19+ CGTCCTCGAAGTCCTGA-TTTTTTAACTTCATTGACAATCCAATCAGTACCTTTTAGTAC
JMFF025O21+ CGTCCTCGAAGTCCTGA-TTTTTTAACTTCATTGACAATCCAATCAGTACCTTTTAGTAC
JMFF032H18+ TTTTTTAACTTCATTGACAATCCAATCAGTACCTTTTAGTAC
JMFF007M12+ CGTCCTCGAAGTCCTGATTTTTTTAACTTCATTGACAATCCAATCAGTACCTTTTAGTAC
JMFF013H01+ CGTCCTCGAAGTCCTGA-TTTTTTAACTTCATTGACAATCCAATCAGTACCTTTTAGTAC
JMFF024D09+ CGTCCTCGAAGTCCTGA-TTTTTTAACTTCATTGACAATCCAATCAGTACCTTTTAGTAC
JMFF012H11+ CGTCCTCGAAGTCCTGA-TTTTTTAACTTCATTGACAATCCAATCAGTACCTTTTAGTAC
JMFF003M13+ CGTCCTCGAAGTCCTGA-TTTTTTAACTTCATTGACAATCCAATCAGTACCTTTTAGTAC
JMSF006G20+ CAATCCAATCAGTACCTTTTAGTAC
JMFF031M14+ CTGA-TTTTTTAACTTCATTGACAATCCAATCAGTACCTTTTAGTAC
                      ____________________________________________________________
consensus CGTCCTCGAAGTCCTGA-TTTTTTAACTTCATTGACAATCCAATCAGTACCTTTTAGTAC
 
. : . : . : . : . : . :
JMFS008D06+ AAGGTCCTTTGTTCTGTACCAATCTCCTCGTTTAATGGCACCTTTAAGAAAAGGATCATG
JMFF022O19+ AAGGTCCTTTGTTCTGTACCAATCTCCTCGTTTAATGGCACCTTTAAGAAAAGGATCATG
JMFF025O21+ AAGGTCCTTTGTTCTGTACCAATCTCCTCGTTTAATGGCACCTTTAAGAAAAGGATCATG
JMFF032H18+ AAGGTCCTTTGTTCTGTACCAATCTCCTCGTTTAATGGCACCTTTAAGAAAAGGATCATG
JMFF007M12+ AAGGTCCTTTGTTCTGTACCAATCTCCTCGTTTAATGGCACCTTTAAGAAAAGGATCATG
JMFF013H01+ AAGGTCCTTTGTTCTGTACCAATCTCCTCGTTTAATGGCACCTTTAAGAAAAGGATCATG
JMFF024D09+ AAGGTCCTTTGTTCTGTACCAATCTCCTCGTTTAATGGCACCTTTAAGAAAAGGATCATG
JMFF012H11+ AAGGTCCTTTGTTCTGTACCAATCTCCTCGTTTAATGGCACCTTTAAGAAAAGGATCATG
JMFF003M13+ AAGGTCCTTTGTTCTGTACCAATCTCCTCGTTTAATGGCACCTTTAAGAAAAGGATCATG
JMSF006G20+ AAGGTCCTTTGTTCTGTACCAATCTCCTCGTTTAATGGCACCTTTAAGAAAAGGATCATG
JMFF021D04+ TCTGTACCAATCTCCTCGTTTAATGGCACCTTTAAGAAAAGGATCATG
JMFF031M14+ AAGGTCCTTTGTTCTGTACCAATCTCCTCGTTTAATGGCACCTTTAAGAAAAGGATCATG
                      ____________________________________________________________
consensus AAGGTCCTTTGTTCTGTACCAATCTCCTCGTTTAATGGCACCTTTAAGAAAAGGATCATG
 
. : . : . : . : . : . :
JMFS008D06+ CAATCCGTAAACGTTTGTGAATATGCGATCCTCATCTTTCAAGCCACCAAAGTGAGTCTT
JMFF022O19+ CAATCCGTAAACGTTTGTGAATATGCGATCCTTATCTTTCAAGCCACCAAAGTGAGTCTT
JMFF025O21+ CAATCCGTAAACGTTTGTGAATATGCGATCCTCATCTTTCAAGCCACCAAAGTGAGTCTT
JMFF032H18+ CAATCCGTAAACGTTTGTGAATATGCGATCCTCATCTTTCAAGCCACCAAAGTGAGTCTT
JMFF007M12+ CAATCCGTAAACGTTTGTGAATATGCGATCCTCATCTTTCAAGCCACCAAAGTGAGTCTT
JMFF013H01+ CAATCCGTAAACGTTTGTGAATATGCGATCCTCATCTTTCAAGCCACCAAAGTGACTCTT
JMFF024D09+ CAATCCGTAAACGTTTGTGAATATGCGATCCTCATCTTTCAAGCCACCAAAGTGAGTCTT
JMFF012H11+ CAATCCGTAAACGTTTGTGAATATGCGATCCTCATCTTTCAAGCCACCAAAGTGAGTCTT
JMFF003M13+ CAATCCGTAAACGTTTGTGAATATGCGATCCTCATCTTTCAAGCCACCAAAGTGAGTCTT
JMSF006G20+ CAATCCGTAAACGTTTGTGAATATGCGATCCTCATCTTTCAAGCCACCAAAGTGAGTCTT
JMFF021D04+ CAATCCGTAAACGTTTGTGAATATGCGATCCTCATCTTTCAAGCCACCAAAGTGAGTCTT
JMFF031M14+ CAATCCGTAAACGTTTGTGAATATGCGATCCTCATCTTTCAAGCCACCAAAGTGAGTCTT
                      ____________________________________________________________
consensus CAATCCGTAAACGTTTGTGAATATGCGATCCTCATCTTTCAAGCCACCAAAGTGAGTCTT
 
. : . : . : . : . : . :
JMFS008D06+ CTCAGGTGGTGGGGGAGGAGGTGGAGACTGTGGGGTATTAGCAGTTGACGCAGCTTGAGC
JMFF022O19+ CTCAGGTGGTGGGGGAGGAGGTGGAGACTGTGGGGTATTAGCAGTTGACGCAGCTTGAGC
JMFF025O21+ CTCAGGTGGTGGGGGAGGAGGTGGAGACTGTGGGGTATTAGCAGTTGACGCAGCTTGAGC
JMFF032H18+ CTCAGGTGGTGGGGGAGGAGGTGGAGACTGTGGGGTATTAGCAGTTGACGCAGCTTGAGC
JMFF007M12+ CTCAGGTGGTGGGGGAGGAGGTGGAGACTGTGGGGTATTAGCAGTTGACGCAGCTTGAGC
JMFF013H01+ CTCAGGTGGTGGGGGAGGAGGTGGAGACTGTGGGGTATTAGCAGTTGACGCAGCTTGAGC
JMFF024D09+ CTCAGGTGGTGGGGGAGGAGGTGGAGACTGTGGGGTATTAGCAGTTGACGCAGCTTGAGC
JMFF012H11+ CTCAGGTGGTGGGGGAGGAGGTGGAGACTGTGGGGTATTAGCAGTTGACGCAGCTTGAGC
JMFF003M13+ CTCAGGTGGTGGGGGAGGAGGTGGAGACTGTGGGGTATTAGCAGTTGACGCAGCTTGAGC
JMSF006G20+ CTCAGGTGGTGGGGGAGGAGGTGGAGACTGTGGGGTATTAGCAGTTGACGCAGCTTGAGC
JMFF021D04+ CTCAGGTGGTGGGGGAGGAGGTGGAGACTGTGGGGTATTAGCAGTTGACGCAGCTTGAGC
JMFF031M14+ CTCAGGTGGTGGGGGAGGAGGTGGAGACTGTGGGGTATTAGCAGTTGACGCAGCTTGAGC
                      ____________________________________________________________
consensus CTCAGGTGGTGGGGGAGGAGGTGGAGACTGTGGGGTATTAGCAGTTGACGCAGCTTGAGC
 
. : . : . : . : . : . :
JMFS008D06+ GCTATAGAATCTACCATTTAGGCCCCACTTCTGACTACAACGTTGAACTAATGCAGTCCT
JMFF022O19+ GCTATAGAATCTACCATTTAGGCCCCACTTCTGACTACAACGTTGAACTAATGCAGTCCT
JMFF025O21+ GCTATAGAATCTACCATTTAGGCCCCACTTCTGACTACAACGTTGAACTAATGCAGTCCT
JMFF032H18+ GCTATAGAATCTACCATTTAGGCCCCACTTNTGACTACAACGTTGAANTAATGCAGTCCT
JMFF007M12+ GCTATAGAATCTACCATTTAGGCCCCACTTCTGACTACAACGTTGAACTAATGCAGTCCT
JMFF013H01+ GCTATAGAATCTACCATTTAGGCCCCACTTCTGACTACAACGTTGAACTAATGCAGTCCT
JMFF024D09+ GCTATAGAATCTACCATTTAGGCCCCACTTCTGACTACAACGTTGAACTAATGCAGTCCT
JMFF012H11+ GCTATAGAATCTACCATTTAGGCCCCACTTCTGACTACAACGTTGAACTAATGCAGTCCT
JMFF003M13+ GCTATAGAATCTACCATTTAGGCCCCACTTCTGACTACAACGTTGAACTAATGCAGTCCT
JMSF006G20+ GCTATAGAATCTACCATTTAGGCCCCACTTCTGACTACAACGTTGAACTAATGCAGTCCT
JMFF021D04+ GCTATAGAATCTACCATTTAGGCCCCACTTCTGACTACAACGTTGAACTAATGCAGTCCT
JMFF031M14+ GCTATAGAATCTACCATTTAGGCCCCACTTCTGACTACAACGTTGAACTAATGCAGTCCT
                      ____________________________________________________________
consensus GCTATAGAATCTACCATTTAGGCCCCACTTCTGACTACAACGTTGAACTAATGCAGTCCT
 
. : . : . : . : . : . :
JMFS008D06+ TTGCAGTGAAAGAAGGCCCTTTACAGGTGCCATAGCAGGCGAAAGATACCGGAGACGAAG
JMFF022O19+ TTGCAGTGAAAGAAGGCCCTTTACAGGTGCCATAGCAGGCGAAAGATACCGGAGACGAAG
JMFF025O21+ TTGCAGTGAAAGAAGGCCCTTTACAGGTGCCATAGCAGGCGAAAGATACCGGAGACGAAG
JMFF032H18+ TTGCAGTGAAAGAAGGCCCTTTACAGGTGCCATAGCAGGCGAAAGATACCGGAGACGAAG
JMFF007M12+ TTGCAGTGAAAGAAGGCCCTTTACAGGTGCCATAGCAGGCGAAAGATACCGGAGACGAAG
JMFF013H01+ TTGCAGTGAAAGAAGGCCCTTTACAGGTGCCATAGCAGGCGAAAGATACCGGAGACGAAG
JMFF024D09+ TTGCAGTGAAAGAAGGCCCTTTACAGGTGCCATAGCAGGCGAAAGATACCGGAGACGAAG
JMFF012H11+ TTGCAGTGAAAGAAGGCCCTTTACAGGTGCCATAGCAGGCGAAAGATACCGGAGACGAAG
JMFF003M13+ TTGCAGTGAAAGAAGGCCCTTTACAGGTGCCATAGCAGGCGAAAGATACCGGAGACGAAG
JMSF006G20+ TTGCAGTGAAAGAAGGCCCTTTACAGGTGCCATAGCAGGCGAAAGATACCGGAGACGAAG
JMFF021D04+ TTGCAGTGAAAGAAGGCCCTTTACAGGTGCCATAGCAGGCGAAAGATACAGGAGACGAAG
JMFF031M14+ TTGCAGTGAAAGAAGGCCCTTTACAGGTGCCATAGCAGGCGAAAGATACCGGAGACGAAG
                      ____________________________________________________________
consensus TTGCAGTGAAAGAAGGCCCTTTACAGGTGCCATAGCAGGCGAAAGATACCGGAGACGAAG
 
. : . : . : . : . : . :
JMFS008D06+ TGCG
JMFF022O19+ TGCGACGGATCTCTGAT
JMFF025O21+ TGCGACGGATCTCTGAT
JMFF032H18+ TGCGACGGATCTNTGATGCGAAGGT
JMFF007M12+ TGCGACGGATCTCTGATGCGAAGGT
JMFF013H01+ TGCGACGGATCTCTGATGCGAAGGTCGCGAAGTGAGAAACTGAGAAC
JMFF024D09+ TGCGACGGATCTCTGATGCGAAGGTCGCGAAGT
JMFF012H11+ TGCGACGGATCTCTGATGCGAAGGTCGCGAAGTGAGAAACTGAGAACCT
JMFF003M13+ TGCGACGGATCTCTGATGCGAAGGTCGCGAAGTGAGAAACTGAGAACCT
JMSF006G20+ TGCGACGGATCTCTGATGCGAAGGTCGCGAAGTGAGAAACTGAGAACCT
JMFF021D04+ TGCGACGGATCTCTGATGCGAAGGTCGCGAAGTGAGAAACTGAGAACCTAAACTCTGAAT
JMFF031M14+ TGCGACGGATCTCTGATGCGAAGGTCGCGAAGTGAGAAACTGAGAACCTAAACTCTGAAT
                      ____________________________________________________________
consensus TGCGACGGATCTCTGATGCGAAGGTCGCGAAGTGAGAAACTGAGAACCTAAACTCTGAAT
 
. : . : . : . : . : . :
JMFF021D04+ TCAACCGAGAAGGCTAAAATGGT
JMFF031M14+ TCAACCGAGAAGGCTAAAATGGTGATTCGCACCACAGGGATGGCCGATGGGATGTGAACG
                      ____________________________________________________________
consensus TCAACCGAGAAGGCTAAAATGGTGATTCGCACCACAGGGATGGCCGATGGGATGTGAACG
 
. : . : . : . : . : . :
JMFF031M14+ CATCAGACGGCTAGGATTTATTGGCGGTACTTCTGGAGCTCTGGCTTTGGTTTGCGAATC
                      ____________________________________________________________
consensus CATCAGACGGCTAGGATTTATTGGCGGTACTTCTGGAGCTCTGGCTTTGGTTTGCGAATC